Callorhinchus milii (elephant shark): 103187124
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Entry
103187124 CDS
T03088
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmk03021
]
103187124 (taf1b)
Transcription machinery [BR:
cmk03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
103187124 (taf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF7685
Motif
Other DBs
NCBI-GeneID:
103187124
NCBI-ProteinID:
XP_042189460
UniProt:
A0A4W3I0X8
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MEQEGAKDFKQACEQCSEVHWGITDEGKFFCKSCHNVIEKTAEVPSEDFIQNVRISSINR
GLKKKRKVDRGCQWYVCEGFQYILNQQVKALIILGASPQIKDEILCNLWRSYLQKSQQAY
TNRPTGSKKKRMVSAVTSCSSGQDSPSGSSNLDDRCLFLESKSEDEVASIQSGSVDGSTY
RSGAQREKLLMSMPMTLAFCYLALLWLRESITLVDLLRFAEMEHVPYLNTFQHFPAEMVL
YGNDTHIFQVQAIPSYDEIQKNMHSLAVFLNLREFPAISEKCFLHPDILVIKYLMEANLP
EEMHFWTRELVKQIGIGETTFLTFQPLIGGTTAINYEVQAVAVIIVALKLLFGLNDKIEW
IASKEAKKISKANPEVKVFQFSKWYQVMRECLDEREDEAQEETARRPWKSEKAIFYSLNA
KLVIFKRKRVIHSLKKQFSRLAGSHQRAEMRRPSSFTFSWSDGNSEKPCFHGDSLEEYKS
TESKLIHTINKHYWFSNQKICKAKCCKQLTKSEEIHFPESYQFVLRLFSFLLSVDSTMVH
KEVCQLEHGLFNVAKLLKPKQKIKRANRLWIL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggagggagcgaaagacttcaaacaggcatgtgaacagtgttcagaggttcac
tggggaatcacagacgaaggcaaattcttttgcaagtcctgccataatgttattgagaaa
actgcagaggttccctctgaggattttatacagaatgtaagaataagtagcatcaacaga
ggactaaagaagaaaagaaaagttgatcgtgggtgccaatggtacgtttgtgaaggcttt
cagtacatcctgaatcagcaagttaaggctctaataatcttgggagcatcaccacagatc
aaagatgaaatcctgtgcaatctttggcgttcctacttgcagaagagtcaacaggcatac
acaaacagaccgactgggtcaaagaaaaaaaggatggtttcagccgttacttcttgttca
tccggtcaggacagtccatcaggttcttcgaacttggatgatcgttgtttgttccttgaa
agtaaatctgaagatgaagtagcatctatacaatcaggatccgttgatggctctacatat
cgatctggtgcacaacgtgagaaattactgatgtctatgcctatgacgctggcattttgt
tacttggcattgctgtggcttcgagagtcaattactctggtagacctactacgatttgct
gagatggaacatgtgccgtacttgaacacgttccagcattttcctgcagagatggtcctc
tacggaaatgatacccacatctttcaagtgcaggcaattccatcctatgatgaaatccaa
aagaatatgcattctcttgctgtgtttctgaacctgcgtgagtttcctgcaatatctgaa
aagtgtttcctgcatccagatattttggtcatcaagtatttgatggaagctaacctacca
gaggaaatgcatttttggacccgagaattggtgaagcaaataggcattggagagacaacg
tttttaaccttccaaccgttgatcggaggaaccacagccatcaactatgaagttcaagct
gtggctgtaatcattgttgctctgaaattgctgtttggcctcaatgacaagattgaatgg
attgcgtctaaggaagctaagaaaataagcaaagcaaatcctgaagttaaggtttttcag
ttcagcaaatggtatcaagtaatgagagagtgtttggatgaaagggaggacgaagctcaa
gaggaaacagccaggcgcccttggaaaagcgaaaaggcaattttctattctttaaatgcc
aaattagtcatcttcaaaaggaaacgtgtgatccacagtcttaaaaagcaattcagtcga
ctcgccggatcccatcaaagggcagaaatgagaagaccttccagtttcacatttagctgg
agtgatggaaactcagagaaaccttgctttcatggagacagtctggaagagtataagtca
acggaaagtaaactgattcataccataaataaacactattggtttagcaaccagaaaatt
tgcaaagcaaagtgctgcaaacagttaaccaagtccgaagaaattcattttcctgaaagc
taccaatttgtgctcagattgttttccttcctgctgagtgtggattcaaccatggtgcat
aaggaagtttgccaattagaacatggactattcaatgttgcaaaattattgaaaccgaag
cagaagatcaaaagagctaatcgattgtggattctctaa
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