Callorhinchus milii (elephant shark): 103187141
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Entry
103187141 CDS
T03088
Symbol
shoc1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmk03036
]
103187141 (shoc1)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Meiosis-specific proteins
Others
103187141 (shoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
103187141
NCBI-ProteinID:
XP_007904708
LinkDB
All DBs
Position
Unknown
AA seq
1498 aa
AA seq
DB search
MDGCVLTEWKKHVYIDDFLERVCVSLVDPPIGVDSLEIVPSSNPNSQIDIDDVSSFLRSN
VLHNINDEQETFEKDAKPADVNSQTDLFMQNEVVFVDYLPEFCKQLPRLHNLCGRLKMHA
LQDPFVNAEGELLTEGLLFRDCLVYQSEKDIAAAENTAIDLAEEDFSAFSQLDEESWMLP
VELDICNTMEFKWITHGSPHGSELKELLHLMAEDVSGIQSPEVIINNDFKTKLMMDLEIS
EFCDSTNYSLKDNEAVIKATQDIIDPVCCKTISNLEVETPLTPPCSTDHMEVTFSTKALQ
EEELSPVKIDSFLSSTENYLLEVQIRQSENVLRSFEALMLGEPQIKQPPFHHTPVCVTFE
LLNAQPEEVTKSSVKALWEEYIKSNRVQEDKIEELHADQCEIRDLQIVKMEEFSLVTMDQ
FEKCSDNSALVAESNTTAIQAYHENEAMHSCEQQDSGVKMLPLQSENMLAVPYNLWFHDT
VKPSPIISCQDDCDPLNSFIMLRSKQIPTLCQTKGDTENQIDNFSKADENACNIAVSSEL
VTASPKKPDQLDLSSNLIEVQASASQCQAYYLLEATAIPVLKNLKSCVAPMVVARTFTEL
SFDHSRFFMKQQEKVVSDSVEQGRSDQKEVQLYKHAALLHLLVTVRDLLMMCDLDTAIEY
LFRAKEMYVSTLGSCLEDIWKKLRIVQYISQRKQERNPKVTELQKQISTWIQMDHTNEHK
VLIIIRMDSDCVRATLTNNLIKVNGLKPAAVLPEESGVLGCQEILNCLQMHSCLVAYNYH
IGADFPWGHFNLVVEYDYVENSCWTKLCKQQNINHMTFKTILPKAPETEDSLLMKSESLL
LELQIPYTFLMSESLLNTPAMLQLLESRYNITLLERNSNPTLHLFGGTDHYAIITVDECT
AIIMQDIEELATTERASDAIILRLTTLALQYSCVWLIFYPKQDLNSQYCFNGKVFHNLAL
IYAALVPFVLKSEETEVKVVILPGIAQTAKVIRQIADLTLISSDRDPFIWLDRSWLTTLP
TEEEKQLVAFPSLNSLVAQLMLNKAPSLLWMLSATVNELQEILREVPGKVLKLFSQITAL
HKLSNSEGPRNAQHERSTFAPPLSEPAESELYPEIAENGHCARGELKEQKSLEMTHVQEG
EASWEPVKDVSAVQFQEVKPGFETRGETCSVYSTQTEMRQKIETALNERKDPPHFLESSD
YNAEAQHQSIARSQNIVPVVNTQQTAPLSNSLFDHLDQLLMKNHSDPLETDLYPENGKLS
SLEQLCSREHIYTTKNKYQRANEIKGMKTSSDTELSFFLQQEVDVSYGLRKKEDMLLTMQ
RLAKTQHPILQHQAFPDSSEKHLENLFHPLIDPLCHQGNRDIENNPKKMPYIKPKFTGDD
SVSRQYTYVDKPHISGGSYFPLKGTDFCNKITDQTFHSEAVKRGMGKKRLCSGTRMNEWI
GSPSAVPDESLTDTASFYMYTPTSSELRYQFLPELKKRRLTYEKVPGRIDGQTRLKFF
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atggatggttgtgtattgactgaatggaagaaacatgtctacatagatgattttcttgag
agggtatgtgtttctttggtggatcccccaattggtgttgacagtttggagattgtgcca
agttcaaatcctaactctcagattgacatagatgatgtgagttcgtttttaaggagcaat
gttttgcataacataaacgatgagcaggagacctttgagaaggatgctaaacctgcagac
gtgaattcacaaacagatttgtttatgcagaatgaagtggtatttgttgattatctgcca
gagttttgcaaacagttaccaaggttgcacaacctttgtggcagattgaaaatgcatgct
ttacaagatccttttgtaaatgccgaaggagagcttttgactgaggggttacttttcagg
gattgcttggtctatcagtcagagaaggatattgctgctgcagaaaatactgcaatagat
ttggctgaggaagattttagtgcattttcacagttggatgaagagtcctggatgctgcct
gttgaactggatatttgcaacacaatggagtttaaatggatcacacatggatccccacat
ggttcagaacttaaagaacttttacatctgatggcagaagatgtgtcaggaattcaatca
ccagaagtgattataaataatgatttcaaaactaagcttatgatggatctggaaatctct
gaattttgtgacagtacaaattattcattgaaagataatgaagcagttattaaagccaca
caggatattattgatccagtttgctgtaaaacgattagcaacttggaagtagaaactcca
ttgactcctccatgttcaaccgatcatatggaagtgactttctcaaccaaagcactacaa
gaggaggaactctctccagtaaaaattgatagctttttatccagcacagaaaactattta
ctggaggttcaaatcaggcaatcggaaaatgtcctcagatcttttgaagctctgatgttg
ggagagcctcaaataaagcaacctccttttcaccacacaccagtctgtgtgacctttgaa
ctgctaaatgcccagccagaggaggtgacaaagtcttcagtaaaagcattgtgggaggaa
tatataaaatcaaatagagtgcaagaggacaaaatcgaggagctgcatgcagatcagtgc
gaaataagagatttacaaattgtgaagatggaagaattttcattggttaccatggatcaa
tttgagaaatgttctgataactctgctttagttgctgagagtaacaccactgccattcaa
gcataccatgaaaatgaagcaatgcattcctgtgaacagcaggacagtggtgttaaaatg
ttacccttacagtcagagaacatgttggctgttccctataacttatggtttcatgatact
gtgaaaccatctccgataatatcttgtcaggatgactgtgatcctctcaacagcttcata
atgctaaggtcaaagcagattccaactctctgtcagacaaaaggtgatactgaaaatcag
atagacaacttttcaaaagcagatgaaaatgcttgcaacattgcagtgagcagtgaattg
gtaacagcttcaccaaagaaacctgatcagttggatttaagtagtaacttgatagaagtt
caagcatcagccagccagtgccaagcatattatctgttggaggctactgcaatccctgtg
ctcaaaaatttaaagagttgtgttgctcccatggtggtagcaaggacctttactgaactc
agttttgaccacagtaggtttttcatgaaacagcaggaaaaggtagtcagtgacagcgtt
gaacaagggaggagtgatcaaaaagaagttcaattgtataaacatgcagcacttctgcat
cttttggtgacagtccgtgatcttctaatgatgtgtgacctggacacagctatagagtat
ttattcagagccaaagaaatgtatgtcagcactttgggttcctgtttagaagatatttgg
aagaaactacgaattgttcaatacatcagtcagagaaaacaagaaagaaaccctaaagta
accgaacttcagaagcagatttctacatggatacaaatggatcatacaaatgaacacaag
gtattaatcattatcagaatggattcagactgtgtcagagctacacttactaataacctc
atcaaggtgaatggtttaaaaccagctgcagtgcttccggaggaaagtggtgttctggga
tgccaggaaattttaaactgtttgcaaatgcattcctgtttggtggcatacaactatcac
attggagctgattttccctggggccatttcaatctggtggtggaatatgattatgtggag
aattcatgttggacaaagctttgcaagcagcagaatataaatcatatgacatttaaaacc
atacttcctaaggctccagaaacagaagactcactattgatgaaatctgagtcattgttg
ttagaactgcagattccatacactttcttgatgtctgaaagtttattgaacactccagcc
atgctccaacttctggaatcaagatataatattacccttttggagagaaatagtaatccg
acactacacttgtttggaggaacagatcactatgctattattacagtggatgaatgcaca
gctataatcatgcaggatattgaggaactggctactactgagagagcctcagacgctatt
atcttgagactaacaactctagcattgcaatatagctgtgtctggctcattttctaccca
aagcaagacctcaactcacagtactgctttaatggaaaagtgtttcacaatcttgccctg
atctatgcagccttggtgccatttgtgctgaaatcagaagaaactgaagtgaaggttgta
atcttaccaggaattgcacagacagccaaggtgattcgtcaaatagcagacttaactttg
atttcatctgatcgggatccattcatctggcttgacaggtcttggcttaccactcttcca
acagaggaagagaagcagctagttgctttccctagtttaaactccttggtagcacagttg
atgttgaacaaagctccatcactgttgtggatgttgtcagcaactgtaaatgaactacag
gaaatccttcgagaggtaccaggaaaggttctaaagcttttcagtcagatcactgcattg
cacaaacttagcaattcggaggggccgagaaacgcacagcatgaaaggtcaacctttgca
cctcccctgtctgagcctgctgagagtgagctctacccagagattgcagaaaatggtcac
tgtgctagaggtgaacttaaagagcagaaaagtctggaaatgactcatgtccaggaggga
gaggcttcgtgggaacctgtgaaagatgtgtcagctgtacaatttcaggaggtaaaacca
ggttttgaaaccagaggtgaaacctgctcggtgtattccacacaaacagaaatgagacaa
aagatagaaacggcgttaaatgagagaaaagatccgccacattttcttgaaagctctgat
tataatgctgaagcacagcatcagagcatcgcacgttctcaaaacattgttcccgttgtg
aatactcagcaaaccgcaccgctgagcaacagcttatttgatcatcttgatcaattacta
atgaagaatcactcagatcccctcgagactgacctttatcctgaaaatggtaaattgtca
tcattggaacagctttgtagtcgtgagcacatatataccacaaagaacaagtatcaaaga
gcgaatgagataaagggtatgaaaactagcagtgacacagagcttagcttctttcttcag
caagaggtagatgtcagctatgggctgagaaaaaaggaagatatgcttttgacaatgcag
aggttggccaagacacagcatccaatactacagcatcaagctttcccggactcatctgag
aaacatttggaaaatttatttcatccgttaattgaccctctctgtcatcagggcaatcga
gacatagaaaacaatcctaagaaaatgccatacattaaacctaaatttactggtgatgac
tcagttagtcgtcaatatacatatgttgacaagcctcacatctctggtggttcttacttt
ccccttaaaggaactgacttttgcaacaaaatcacagatcagacttttcattctgaggca
gttaaaagaggaatgggaaagaaaagactgtgctcaggaacacggatgaacgaatggata
gggtcaccttcagcagttccagacgaaagtttaactgacacagcatcattttatatgtac
acaccaacttcatcagaactgaggtaccaatttttaccagaactgaagaaaaggcgactg
acctatgaaaaggttcctggaagaattgatggacagactcgtctcaaatttttttag
DBGET
integrated database retrieval system
