KEGG   Callorhinchus milii (elephant shark): 103187207
Entry
103187207         CDS       T03088                                 
Symbol
aptx
Name
(RefSeq) aprataxin
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    103187207 (aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmk03400]
    103187207 (aptx)
Enzymes [BR:cmk01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     103187207 (aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     103187207 (aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     103187207 (aptx)
DNA repair and recombination proteins [BR:cmk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     103187207 (aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     103187207 (aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA Apolipo_F
Other DBs
NCBI-GeneID: 103187207
NCBI-ProteinID: NP_001279054
UniProt: K4G097
LinkDB
AA seq 352 aa
MRVCWLVSKDGMHEPIRLPHLQSVIIGRGLDTKIADKKCSRHQVQLKADYNKGYAFVKQL
GVNPSNINLEDVGKDKEVKLKPGQTLHIVNKLYPHIIQFAEDTTDQEGCSPKRPSDEHST
NKTSDMLSKLLKTEESNRREERRKRSPEDGCMNEDNNSLETPINHASVAEKKGSGHWSQA
LKVSMQDPTMQLYKDDKVVVIKDKYPKAHYHWLVLPWVSIPSLKAVRSDNLSLLKHMHQV
GEKMVSECPDSGKLKFRLGYHAIPSMSHIHLHVISQDFDSPCMKNKKHWNSFTTDYFLES
QDVIEMVERDGKVIVKDATTELLKLPLVCHICKQQQSTIPQLKEHLKKHLGH
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgcgagtgtgttggctggtgagtaaagatggaatgcatgaacctattcgccttccacat
ttacagtctgtgataatcggtcgaggcctagataccaaaattgcagataaaaagtgctcg
cgacatcaagttcaactgaaagcagactacaataaaggatatgcttttgtgaaacagttg
ggtgtaaatcctagcaacatcaatttggaagatgtggggaaagacaaggaagtgaagttg
aagcccggacagactcttcacattgtcaataagctttacccgcacatcattcagtttgct
gaagatactacagaccaggagggttgctccccaaagagacccagtgatgaacattctaca
aacaaaacctccgacatgctgagcaaactccttaaaactgaagaatcaaataggagagag
gaaaggaggaaaagaagccctgaggatggctgtatgaatgaagacaacaacagtttggag
actccgattaatcatgccagtgtagctgaaaagaaaggatcggggcattggagccaagca
ttaaaagtttccatgcaggatcctacaatgcagctgtataaagatgataaggtggtggtg
attaaagataagtacccaaaggctcattaccactggctggtgttaccatgggtctctatt
cctagcttgaaggctgtaaggagtgacaacctatcattacttaaacacatgcatcaagtt
ggtgaaaagatggtgagcgaatgccctgattctgggaaattaaagtttcgcttaggttat
catgccatccccagcatgagtcatattcacctccatgttatcagccaagactttgattct
ccatgcatgaaaaacaaaaagcattggaattcattcacaactgattatttcctggaatcc
caagacgtgattgagatggtcgagcgggatggaaaggtgatcgtcaaggatgcaacaact
gaattattaaaactgcctcttgtatgccacatctgcaaacagcagcaatccacaattcca
caactgaaagagcatttgaaaaagcaccttggccactga

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