Callorhinchus milii (elephant shark): 103187534
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Entry
103187534 CDS
T03088
Symbol
efl1
Name
(RefSeq) LOW QUALITY PROTEIN: elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103187534 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmk03009
]
103187534 (efl1)
Ribosome biogenesis [BR:
cmk03009
]
Eukaryotic type
Pre-60S particles
GTPases
103187534 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
EFG_IV
MMR_HSR1
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
103187534
NCBI-ProteinID:
XP_042200037
LinkDB
All DBs
Position
Unknown
AA seq
1138 aa
AA seq
DB search
MGHTSLEKIIALQSKTANIRNICIVAHVDHGKTTIADSLIASNGIISKRLSGKLRYMDSR
QDEQIRGITMKSSSISLYFAKDNQEYLINMIDSPGHVDFSSEVSTAVRVCDGAIVVVDVV
EGVCPQTQAVLRQTWLENIRPVLVINKMDRLITELKLTPSEAYTQLQKXLEQINAVTGSL
FTSKVLEERAEKDVKMLSDSNSMNSKQVYDWSTGLEETDDSHLYFSPDQGNVVFASAIDG
WGFSIEQFAQMYSQKIGINAEVLLKTLWGDYYLNSKAKKIMKGAQGKGKKTLFVQFVLEN
IWSLYEAVLIRRDKEKITKIITSLGLTILPRDSRHSDPKVHLNAICSQWLPVSNAVLSMV
CDKLPSPLDIAAERIEKLMCVRAQKFDSLPAQTQALKQAFIECKSDETAPVIVFVCKMFA
VDSKALPHNKQRPLTQEEIADRQQQARRRHAEKLANQEQKLAQSLSGNTSSTSTENKESQ
LTNQVEHMSLNSEGREAEDKEHFIAFARVYSGTVRRGQKIFVLGPKYDPSEALAKIPENA
SPVDDLQSIPHMTCCTLEDLYLLMGRELEKLEEVPVGNVLGIGGLQDYVLKSATLSTSPA
CPPFTPLNFEATPIVRVAVEPKHPSEMLQLVRGMRLLNQADPCVEVLVQETGEHVLVTAG
EVHLQRCLDDLRERFAKIEISVSEPIVPFREIIVRPPKVDMVNENMGTQQKVAVIHQKKE
EQNKYPEGVHVDSDGLVTINTPNKLSTLSVRAMPLPEEVTQLLEKSSDLIRTIELFNLSV
KEGKQALEINGKTLDAIREFKQKLKENFVGRKWRNTVNQIWSFGPRRCGPNILLNRLETY
HRPSLWQCLDTTTEDAGIYKDFDKSIISGFQLATLSGPVCEEPLMGVCFILEKWDMSKLQ
QLVYTNSQFSTQLDTIEETPQPKQDKTTKENILSELKPTLEIRDERTQGDQTPAETATHA
ICNSQAVVADCYGPFSGQLIATMKEACRFAFQAKPQRLMAAMYTCEIMATAEVLGRVYGV
LSKRVGRVLQEEMKEGTEMFIINAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEVIPS
DPFWVPTTEEEYLHFGEKADTVNQARKYMNAVRKRKGLYVEEKIVEHAEKQRTLSKNK
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgggtcatactagtttggaaaaaataattgctctgcagagcaaaactgccaacatccga
aatatttgtatcgtagctcatgtggaccatggtaagaccactatagctgacagccttatt
gctagcaatgggatcatttctaaacgactttcaggaaagctgcggtacatggatagccgg
caagatgagcagatcagaggaatcacaatgaagtcgagctctatatcattgtatttcgct
aaagataaccaggagtacctgatcaatatgatagactctcctggccatgtggatttttct
tctgaagtatcgactgctgtacgagtatgtgatggtgccattgtggtagtagatgttgtt
gaaggtgtctgtcctcaaacacaggccgtcttacgccagacttggttggagaacatccgt
ccagtattagtcatcaacaaaatggatagattaataacagagttaaagttgactccatct
gaagcttatacccaattgcagaagnatttggaacagataaatgcagtcactgggagtctt
tttacatcaaaagtactagaagagagagcagaaaaggatgtcaaaatgctgtctgattcc
aactccatgaacagtaagcaggtttatgactggagtactggcctggaagaaaccgatgat
tcgcacctttatttctcccctgaccagggtaatgtggtatttgctagtgccatagatgga
tggggcttcagcattgaacagtttgcccagatgtacagccagaaaatcggtatcaatgcc
gaagttttactgaagactctctggggtgactattatttgaattcaaaggcaaagaagata
atgaaaggagcccagggaaaaggaaaaaaaactctctttgtacagtttgtactagaaaac
atttggagtctttatgaggctgtgcttatcagaagggacaaagagaagattactaaaatc
ataacctctctgggtctaacgattctgcctcgtgattcacgccatagcgatccgaaagta
catctcaatgccatttgtagtcaatggctacctgtctccaatgctgtgctgtcaatggtg
tgtgacaaactccctagtcccttggatattgcagcagagcggattgagaagctcatgtgc
gttcgagcccaaaagtttgattcactgcctgcacaaacccaagctctcaagcaagcattt
attgaatgcaagagcgatgaaactgccccagttatcgtatttgtgtgcaaaatgtttgct
gttgattcaaaagctttgcctcacaacaagcagagacctttgactcaagaagagatagcc
gatcggcaacaacaggcccgacgtcgacatgcagagaaacttgcgaatcaagagcagaag
cttgcacagagcctttctgggaatacttcctcaaccagtacagagaacaaagagtctcag
ctgaccaaccaggtggagcacatgagtctgaactctgaaggacgagaggcagaagacaaa
gaacacttcatcgcctttgccagggtctacagcggaacagttcgcagaggacagaaaatt
tttgttctaggaccaaagtatgacccttcagaagctttagccaagatacctgaaaatgct
tcacccgttgatgatcttcagtctatcccgcacatgacttgctgtacattggaagaccta
tacctgctaatgggcagagaattggagaagctagaggaagtacccgtgggcaatgtgcta
ggaattggaggcctgcaagattatgtcttaaaatctgccacactctcaacgtcccccgct
tgccctccttttacacctttgaactttgaagccactccgattgtacgggtggctgtggaa
cccaaacatccaagtgaaatgctgcagttggtgagaggaatgaggctgcttaatcaggct
gacccgtgtgtggaggttctagttcaggagactggagagcatgtgctagtcacggctggg
gaggtgcacctccagcgttgtttggatgatctcagagaaagatttgcaaagattgaaatc
agtgtgtccgaaccaattgttccattcagagaaataatcgttcggccaccaaaggtggat
atggtaaacgaaaatatgggaactcagcaaaaggttgctgttatacatcagaagaaagag
gagcagaataaatatcctgaaggtgtccacgtggattctgacggacttgtgaccattaat
acacccaataaattgtccactctcagtgtgagagccatgccacttcctgaggaagtgaca
cagcttcttgaaaaaagtagtgacttgattcgtacaatagagcttttcaacttgtcggtg
aaggaaggaaaacaggccctggaaattaatgggaaaactcttgacgctataagagaattt
aagcaaaagctgaaggagaattttgtagggaggaaatggagaaatactgtgaaccaaatt
tggtcctttggaccacgccgttgtggtccaaatattttattaaatagattagaaacctac
cacagaccatctttatggcagtgtcttgacacaactactgaggatgcaggaatatacaaa
gattttgacaaaagtattatcagtggatttcaattagctactctttcaggtcctgtgtgc
gaagaacctctcatgggtgtctgtttcatattggaaaagtgggacatgagtaaactacaa
caacttgtttacacaaatagccagttttccacacagttagacacaatagaggagactcca
cagccaaaacaagataaaaccacaaaagaaaatattctttctgaattgaaacctacattg
gaaattagagatgaacggactcagggagatcaaactccagctgagactgcaacacatgct
atatgtaactctcaggcggtggttgcagattgctacggtcctttttctggtcaactcatt
gccacaatgaaagaagcttgccgttttgctttccaggcaaagcctcaacgactaatggca
gcgatgtacacgtgtgaaattatggctactgcagaagtattaggtcgggtctatggggtg
ctttcgaagcgtgttggccgagtattacaggaagagatgaaggaggggacagaaatgttc
attatcaatgcagttctgccagtagcagagagcttcggctttgctgatgagatcaggaag
cggacaagtggtctagccagcccacagctggtgttcagtcactgggaggtaattcccagt
gatcccttttgggtccctacaacagaagaagaatatttgcattttggagagaaggcagat
acagttaaccaggcacgcaaatacatgaatgcagtgaggaaacggaaaggattatatgtg
gaagagaaaattgttgaacatgcggagaagcaaagaacactcagtaaaaataaataa
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