KEGG   Callorhinchus milii (elephant shark): 103187575
Entry
103187575         CDS       T03088                                 
Name
(RefSeq) transportin-2
  KO
K18727  transportin-2
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103187575
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmk03019]
    103187575
Messenger RNA biogenesis [BR:cmk03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     103187575
SSDB
Motif
Pfam: HEAT_EZ HEAT TPR_IMB1 HEAT_GCN1 HEAT_2 Arm TOR1L1_N IBN_N Vac14_Fab1_bd TPR_IPO5 HEAT_EF3_N Cnd1 TPR_DNAAF5 HEAT_MROH2B_C Adaptin_N PDS5 MMS19_C HEAT_GCN1_C Ltn1_1st INTS7_N HEAT_MROH2B_1st UNC45-central Dopey_N VPS15-like_hel TTI1 SCD TPR_TTI1_C DUF2573 RTP1_C1 DUF3689 Replitron_HUH
Other DBs
NCBI-GeneID: 103187575
NCBI-ProteinID: XP_042200576
LinkDB
Position
Unknown
AA seq 886 aa
MEWQPDEQGLQQVLQLLKDSQSPDTATQRAVQQKLEQLNQYPDFNNYLIFVLTRLKSEDE
PTRSLSGLILKNNVKAHYQSFPQGVADFIKQECLNNIGDTSPLIRATIGILITTIASKGE
LQAWPELLPQLCNLLNSEDYNTCEGAFGALQKICEDSSEMLDSDALNRPLNIMIPKFLQF
FKHCSPKIRSHAIACVNQFIIGRAQALMDNVDTFIEHLFALATDEDSEVRKNVCRALVML
LEVRIDRLLPHMHSIIQYMLQRTQDADENVSLEACEFWLTLAEQPICKEVLSGHLIQLIP
ILVIGMKYSEIDIILLKGDVEEDEAVPDSEQDIKPRFHKSRTVTLQHEEDATAEDDDYDD
DDDDTLSDWNLRKCSAAALDVLANVFRDDLLPHLLPLLKGLLFNPDWVVKESGILVLGAI
AEGCMQGMVPYLPELIPHLIQCLPDKKALVRSIACWTLSRYAHWVVSQPPDQYLKPLMTE
LLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGKYQHKNLLILYDA
IGTLADSVGHHLNKPEYIQKLMPPLIQKWNELKDEDKDLFPLLECLSSVATALQSGFLPY
CEPVYQRCVTLVQKTLAQAMMYNTQPEQYEAPDKDFMIVALDLLSGLAEGLGGNVEQLVA
RSNIMTLLFQCMQDTMPEVRQSSFALLGDLTKACFQHVKPCIAEFMPILGTNLNPEFISV
CNNATWAIGEICMQMGAEMQPYVSLVLNNLVEIINRPNTPKTLLENTAITIGRLGYVCPQ
EVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICMMIGVNPGGVVQDFIFFCDAVASWVN
PKDDLRDMFCKILHGFKEQVGEENWQQFSEQFPPLLKERLSAFYGV
NT seq 2661 nt   +upstreamnt  +downstreamnt
atggagtggcaacctgacgaacagggactccagcaagtgcttcaactgctcaaagactct
cagtcgccagacacagcaacacagcgtgcggtacagcaaaaattggagcaactgaatcag
tatccagacttcaacaattatctcatttttgtcctaacgaggctaaaatctgaagatgag
ccaacgagatccctgagcgggctgattctgaagaacaacgtgaaggctcattaccagagt
tttccacagggagtggctgattttattaagcaggaatgtttgaacaacatcggggatacc
tcgccccttatcagagcaaccataggtattctcatcactaccatcgcttcaaagggcgag
ctacaagcctggcctgagttgctccctcagctttgtaacctgctcaactctgaggattat
aacacctgtgagggagcattcggtgccttacagaaaatctgtgaggattcctccgagatg
ctggacagcgatgccctgaacagaccactcaacatcatgatccccaagttcctgcaattc
ttcaagcattgcagtccaaagatcaggtctcatgcgatcgcctgtgtgaaccagtttatc
atcggtagggctcaggcgctgatggataatgtcgatacgttcattgagcacctgttcgcg
ttggcgacagacgaggactctgaggtgaggaagaacgtgtgccgagctctggtgatgctg
ctggaggtgcggattgatcggttgctcccacacatgcacagtatcatccagtatatgcta
cagaggactcaggatgctgatgaaaacgtgtcattggaagcgtgtgaattctggctgacg
ttagctgagcaacccatctgtaaggaagtcctgtctggtcacttgatacaattaattcct
attttagtgattgggatgaagtactctgagatcgatatcatccttttaaagggcgatgtg
gaggaggacgaagctgttccagacagcgagcaggacattaagccacggtttcacaagtcg
cgcacggtcacgctgcagcacgaggaggatgcgactgcagaagatgatgattacgacgac
gacgatgacgacactctgtcggactggaacctgaggaaatgttctgcagccgcgttggac
gttctggccaatgtttttcgggatgatcttctgccccacctcctgccgctgctcaaaggg
ctgctcttcaatccggattgggtggtcaaagagtctgggatcctggttctcggggccatt
gcagaaggttgcatgcagggaatggtcccatacctgcctgagctgatcccacacctgatc
cagtgtctcccggacaagaaggcactggtgcgttccattgcctgttggacactcagccgc
tatgcgcactgggtggtcagccagcccccagaccagtacttgaaaccactgatgacagaa
ctgctcaagcggatcctggatgggaataagcgggtgcaagaggcagcatgcagtgccttt
gctacattggaggaggaggcctgcacagaactcgtcccgtatctcagctatatcctggac
acgttagtctttgcattcgggaagtaccagcacaagaacctcctgattctgtacgacgcc
atcggcaccctggccgactctgtgggacatcacctcaataaacccgaatacatccagaag
ctgatgcctcctctgatacagaaatggaatgagttgaaggatgaagacaaggaccttttc
cctctgttggagtgcctctcgtcagtagcaacagccctgcagagtggattcctcccgtac
tgtgagccagtctatcagcgctgtgtcaccctggtgcagaagacacttgcccaagctatg
atgtataacacacagccggagcaatacgaagctccagataaagacttcatgatcgtggcc
ctggacttgctgagcgggctagcggaggggctcgggggcaatgtggagcagctggtagcc
aggagcaacatcatgacccttctctttcaatgcatgcaggacacgatgcctgaggtgcgg
cagagctcatttgcactcctcggtgacctaaccaaagcctgttttcaacacgtgaagccg
tgtatagcggagttcatgccaatcttggggaccaacctgaacccagagttcatctctgta
tgcaataacgccacatgggccattggggagatctgtatgcagatgggtgccgagatgcag
ccgtacgtctcattggtactgaataacttggtggagataatcaacagacccaacactccc
aaaacactgctcgaaaacacggctatcaccatcgggcggctgggctacgtgtgtccgcag
gaggttgcccccatgctgcagcagttcatcagaccctggtgcacatccctgcggaacatc
cgtgacaatgaggagaaagactctgccttccgtggaatctgcatgatgattggagtgaat
cccgggggtgtggtgcaggattttattttcttctgtgatgcggttgcttcgtgggtgaac
ccaaaggacgacttgcgagacatgttttgcaagatcctgcacggcttcaaagaacaggtc
ggtgaggagaactggcagcagttctcagaacagttcccgcctctgctaaaggagagactg
tctgcgttctatggcgtgtag

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