Callorhinchus milii (elephant shark): 103187837
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Entry
103187837 CDS
T03088
Symbol
col14a1a
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cmk00535
]
103187837 (col14a1a)
Proteoglycans [BR:
cmk00535
]
Extracellular matrix (ECM) proteoglycans
Others
103187837 (col14a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
NDNF
VWA_3
vWA_SIBA-E
DUF3439
Motif
Other DBs
NCBI-GeneID:
103187837
NCBI-ProteinID:
XP_007905698
LinkDB
All DBs
Position
Unknown
AA seq
1871 aa
AA seq
DB search
MQIFRHRAETCLLLAFLAVTAHFISEAQGQVPSPTRLRFTVVSQDSVRIAWKSPKGRFQG
YRLTVTPVEGGKAQKITLQKSENAAVIEGLIPNHEYIVQLFAVSNNRESLPAQGRFRMKV
SRIRNKPGEPKRKKDKLTDSDALPEQGSQFTCKSSAIADIVILVDGSWSIGRLNFRLVRQ
FLGNLVSAFNVGSDKTRIGLAQYSGDPRIEWYLNQYETKQAVLDAARNLPYKGGNTLTGL
ALSYIQENSFKPEGGARTGVPKIGILITDGKSQDDVIPPAKRLRDAGIELFAIGVKNADV
NELKAIASEPDNTHVYNVADFNIMNTIIESLTKTVCSRVEEQDKEIKGGSGGAGSNLVAP
TNLVTSEITPRGFRVSWTHAPGKVEKYRVVYYPSRGGKPEEVVVDGTELTAVLQNLMSLT
EYQLAIFAVYSNAGSDALRGVETTLALPSAADLEIYDVTHSSMRVKWKAAEAASGYMILF
AALTEAQAADEKELKVSGSVTDIELEGLSPNTEYTVTVYAMYGEEASDPLTGQDTTLPLT
PPRNFQFSEIGHSSVRVTWDSPSKKARGYRIMYVKTDGSEINEVDVYDSTTILLRNLTSL
TEYTVGILSIYDEGQSDPVTGSFTTENVPNPLFLTVSDASVDSFRVSWEHAADDITLYRL
VWTPLSGEESKELVLSGDMDTIILDDLLPSTEYEVSLSGIYSDEVESAAVAVLATTFEET
TTITITTIMPATTRIPTTAVVRSGIRNLAVNDETPFSLQISWNHVDNHVQQYRVSYVTTR
GDRAEEAVMVPGKQNSLLLQPLLSDTAYRITVAPVYTDGEGSTLSVNGKTLALSGPRNLR
VSEEWYNRFRIKWDPPPSATMGYRVVYQPVSVPGPALETFVGDDVNTMLILNLMSSTEYS
VKVFATYSTGFSDALTGKAKTLYLGVTNLTPYEVRMTSMCAQWKVHRHATANRVIIESLR
DGKKNEVIVGGGTSWHCFYELLPDTEYRISVHSQLREIEGPAINILHRTFSVPTQPPTKP
ATTLPPPTIPPAREVCKAAKANLVFLVDGSWSIGDENFIKIIGFLYSTIGALDKIGREGT
QVAIIQFSDDPRTEFQLNAYKDKENLLNAIQNIQYKGGNTKTGKAIQHARDSVFTVAAGL
RRGIPRVLVVITDGRSQDDVNKISKEMQLDGYSIFAIGVADADYSELLNIASKPSRRHAF
FVDDFDAFKKIEDELVTFVCETASATCPLVLLGDNSLSGFKMMEMFGLMEKEYATVEGVS
MEPGSLNSFPCFRIHKDALITQPTKSIHPEGLPSDYTMTFLFRLLPDTPQEPFALWEILN
KENEPLVGVILDNGGKTLTYFNYDYKGDFQTVTFEGPDIKKIFYGSFHKLHVIISKTHTK
LVIDCKQVGEKPTSAAGNITTNGVEVLGRMVRSRGPRDSSAPFQLQGFDIACTTSYANRD
KCCELPAMRDEANCPALPHACTCSQDSKGPPGPSGPQGGPGLRGARGERGEPGQRGIDGP
RGEIGSPGPQGPPGPQGPNGLSIQGPPGTMGEKGDKGDPGSSGPQGIPGAPGIPGREGAS
GQRGPPGKDGSVGPPGSHGPAGSPGAPGSPGHSGSPGSQGGLGPPGSSGSKGEKGQRGDI
QSQTTVRSIARQVCEQLIQSHMARYNSILNHVPNNHATVRANPGPPGEPGRQGPQGTSGE
QGPQGRSGFPGNPGLPGRPGERGLTGDKGDRGSPGIGKQGPRGPSGSPGPQGEGRTGSQG
SPGLQGRPGTSGRSGISGPRGPPGSPGYCDPSSCAGYNLGGGYGDPTDQDIPVVQLPPNS
YQTYDPSDPYEEYDPYVVQHPYPNPYSQPTYPEPRPVQPDDTLMEESEAIEVRSPGISRF
TRDLSKGSSTP
NT seq
5616 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcttcagacacagagcagaaacctgcctcctcctggcctttctggcagtgaca
gctcatttcatcagtgaggcacaaggtcaagttccatctccaacaagattaaggtttact
gtagtgtctcaggacagtgttaggattgcatggaagtcccctaaggggagatttcaggga
tacagactaacggtgacaccagtagaaggtggtaaagcgcagaaaattaccctacaaaag
agtgaaaatgcagcagtaattgaaggtcttattccaaaccacgaatatattgtgcaactc
tttgcagtcagcaacaacagggagagtttacctgctcaggggcgattcagaatgaaagta
tcacggatcaggaacaaacctggagagccaaaacggaaaaaggataaactgactgacagt
gatgcattgccagagcaaggttcacaatttacatgcaaatcttcagcaatcgcagacatt
gtgattcttgtggatggctcctggagtattggccgacttaatttccgactagtgcgacag
tttttgggaaacttggttagtgctttcaatgttgggtctgacaaaacaagaataggcctg
gctcaatacagtggggatcccaggatcgaatggtatctaaatcaatatgaaacaaagcaa
gctgtattggatgctgctagaaatcttccttataaaggcggcaacacacttacagggctt
gccttatcctatatccaggagaatagcttcaaacctgaaggaggggctagaaccggcgtg
ccaaagatcgggatcttgatcactgatgggaagtctcaagatgacgtcattccaccagct
aaacgcttacgcgatgctggaatcgaactcttcgctattggtgtgaagaatgcagatgtg
aatgaattgaaagcaattgcctccgaaccagacaatacgcatgtttacaacgtcgctgat
tttaatatcatgaacacaatcattgagagcctcacaaaaactgtgtgctcacgtgtggaa
gagcaggataaagaaataaaaggaggcagtggaggtgcaggatcaaatctggtagctccc
acaaatctcgtgacatctgagataacacctcggggcttccgtgttagctggacccacgcc
cctgggaaagtggagaagtaccgagtggtgtattaccccagcaggggaggaaagccagaa
gaggtggttgtggatggcacagagttaacagcggttctccagaacctgatgtccctgacc
gaatatcagctcgcaatctttgccgtgtattcaaatgctggcagtgacgccctacgtggc
gttgaaactacattggcacttccttcagctgcagatctggaaatctatgatgtaacacac
agcagtatgagagtcaagtggaaggctgctgaggctgcctctggttacatgatactgttt
gctgcactcacagaagcacaagcagctgacgaaaaggagttgaaagtttcaggttcagtc
accgatatagaacttgaaggattgtctccaaatactgagtatacagtaacggtgtatgcc
atgtacggtgaggaggccagtgatccactgacaggacaagacacaacattgccactcact
ccgcccagaaacttccaattctcggaaattggccacagcagtgtcagggtcacctgggat
tcaccttcaaagaaagcacgaggatatcgcatcatgtatgtgaaaactgatggcagtgaa
atcaatgaggttgatgtttacgattccactaccattttattaagaaacctgacctcactg
acagagtacacagttggtattttatcaatctatgacgaagggcaatcggacccagttaca
ggcagtttcacgacagagaatgtcccaaatcctttgttcctcactgtcagcgacgcttct
gtcgacagcttcagggttagttgggagcatgctgcagatgacatcaccttatacagatta
gtgtggacccccttaagtggtgaagaatcaaaagagctggttttgagtggagacatggat
actatcattcttgatgatttgctaccaagtacagagtatgaagtttcactctctgggatt
tacagcgatgaggttgaaagtgctgccgtggcagtgcttgcgaccacatttgaggagaca
accacaatcaccatcaccacaattatgccagcaaccactcggatacctacaacagcagtt
gttcgatctggaataagaaacctagctgtgaatgatgaaacaccatttagcctgcaaata
tcatggaaccacgtagacaaccatgttcagcagtacagagtatcctatgtgaccacgaga
ggtgaccgagccgaagaagcggtcatggttcctggcaagcagaatagcctcctcctccag
cctctgctctcagacacagcgtacagaattactgttgcccctgtctatactgatggagaa
ggaagcacactctctgttaacggcaagacgttggcactttcaggaccaaggaacctgcgg
gtctcagaggaatggtataatcgcttccgaattaaatgggaccctccaccatcagcgacc
atgggctacagagtggtgtaccagcctgtctctgtaccaggaccagctctggagaccttt
gtaggagacgacgtaaatacaatgctgattctcaacttgatgagcagcacagaatacagt
gtcaaggtgtttgcaacatactcaactggtttcagtgatgcacttacaggaaaagccaag
acattatacctcggcgtgacaaatctcactccatatgaagtgcgaatgacgagcatgtgt
gcacagtggaaggtgcacagacatgctactgccaacagagtgattattgaatctcttaga
gatggaaagaagaatgaagtgattgttggtggaggtacatcctggcactgtttctacgag
ctccttcctgatactgaataccgaatcagtgtccactctcagctgcgagaaattgaaggc
ccggccatcaacatactgcacagaacattttctgtccccactcaaccaccaactaaacca
gccacaactctacctcccccaacaatccctcctgcccgtgaagtttgcaaagctgccaaa
gctaacctggtattcctggtggatggttcgtggagtattggagatgaaaacttcatcaaa
atcatcggctttctctacagtactataggagctctggacaagattggccgtgaaggaact
caagtggcgataattcaattcagtgacgatcccaggacagaatttcagctgaatgcatac
aaagacaaagagaacctccttaatgccatccagaacatacagtacaaggggggcaataca
aagacaggcaaagcaatccagcacgcccgagattctgtcttcacggtagcagcggggctg
cggagaggaatcccgagagtccttgttgtgattacagatggacggtcacaagacgacgtg
aacaagatttccaaagagatgcagcttgatggttacagcatttttgcaataggtgtcgct
gatgccgactattctgagcttctaaacatagctagcaagcccagccggcggcatgccttc
tttgtggacgattttgatgccttcaagaagattgaagatgagcttgtcacatttgtctgt
gaaactgcatctgccacttgtcctttggttctcctgggagacaatagcctgtcagggttt
aagatgatggagatgtttgggctgatggagaaggagtacgctactgtagaaggggtttcc
atggaacctggctctctcaatagcttcccttgtttcagaattcacaaagacgcccttata
acacagccaacgaagagcattcatcctgaagggctgccttctgattacactatgactttc
ctcttccggttgctgcctgacacaccacaggaaccttttgccctctgggagattctaaac
aaggaaaatgaaccactagttggagttattttggacaatggtggaaaaactctcacttat
ttcaactacgactacaagggtgatttccagacagtcacttttgagggtcctgacatcaag
aaaattttctatggaagtttccacaagttgcatgtgattatcagcaagacccacaccaag
ctggttattgactgcaagcaagtgggggaaaagccaaccagcgcagcagggaacatcacc
acgaatggagtggaagtgttgggccgcatggtgcgatccaggggcccgcgagacagctct
gcaccatttcagcttcagggctttgacattgcctgtaccacctcctacgcaaacagggac
aagtgttgtgagcttccagctatgagagatgaagccaattgcccggctctgccacatgcc
tgtacttgttcccaggacagcaaaggaccaccagggccttcaggacctcaaggtggtcca
ggtttaagaggtgcaagaggagagcgaggagaaccaggtcaaaggggaatagatggccct
cgcggtgaaattggctctccaggtccccagggaccgcccggtccacagggaccaaatgga
ctttccattcaaggacctccgggaaccatgggtgaaaaaggcgacaaaggagatcctggt
tcctcaggcccacagggaattccaggcgcaccagggatcccagggcgggaaggtgcatca
ggtcaaaggggtccacctggtaaagatggttctgtagggccacctggctcacatgggcct
gcgggaagtccaggtgctccaggctctcccggccattcaggaagcccaggatcccagggt
ggattaggaccaccaggctcttccgggtcaaagggcgaaaagggtcaaaggggagatatt
cagtcgcaaaccacggtccgttcgattgctcggcaagtgtgcgagcagcttatccagagt
cacatggcaagatataactctattctcaaccacgttccaaacaaccacgcaacagttcgg
gcaaacccagggcctcctggcgagcctgggcgccaaggacctcaaggaacttcaggagaa
caaggacctcagggacgttcaggattcccaggaaatccaggcctgcctggcagaccagga
gaaagaggtttgacaggtgacaaaggagatcggggaagtccaggaattggcaaacaagga
cccagaggaccatcaggatcaccaggacctcaaggggaggggcgaactggtagccaagga
tcacctggtcttcaaggccgaccaggtacctcaggacgttctggaatctctggtccaaga
ggtccccctggttcacctggctactgtgatccatcatcctgtgctggctacaatctcgga
ggtggatacggtgatccaactgatcaagacattcctgtagtacaattacctcccaactcc
taccaaacctatgaccccagcgatccttatgaggaatatgatccatacgtagttcagcat
ccctacccaaacccatactcccaacccacctacccagaacctcgacccgtccaaccagat
gacaccttaatggaagagtccgaggccatcgaagtccgctcgcctggaatcagccggttc
acaagggatttgtccaaagggagcagcacaccatga
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integrated database retrieval system
