Callorhinchus milii (elephant shark): 103187840
Help
Entry
103187840 CDS
T03088
Symbol
taf2
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103187840 (taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmk01002
]
103187840 (taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmk03021
]
103187840 (taf2)
03036 Chromosome and associated proteins [BR:
cmk03036
]
103187840 (taf2)
Peptidases and inhibitors [BR:
cmk01002
]
Metallo peptidases
Family M1
103187840 (taf2)
Transcription machinery [BR:
cmk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103187840 (taf2)
Coactivators
SAGA/TFTC/STAGA complex
103187840 (taf2)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
103187840 (taf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TAF2_C
TAF2_3rd
HEAT_2
Peptidase_M1_N
Peptidase_M1
SR-25
Miff
Motif
Other DBs
NCBI-GeneID:
103187840
NCBI-ProteinID:
XP_007905708
UniProt:
V9K8B8
LinkDB
All DBs
Position
Unknown
AA seq
1201 aa
AA seq
DB search
MNRKKSDKGFESPRPYKLTHQVVCINNINFQRKSVIGYVELTIFPSVANLNRIKLNSKQC
RIYRVRVNDLEAAFIYNDPTLEVCHHESKQRNLNYFANAYTAAVSAVDPDTGNGELCIKV
PSELWKHVDEMKVLKVYIEFSLDQPKGGLHFVVPDMEGSMAERGAHAFSFGYENCTRFWF
PCVDSYSELCTWKLEFTVDAAMVAVSNGDLVETIYTHDMRKKTFHYTLTIPTAAPNISLA
VGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSFLHEIFEFYEEILTCRYPYACYKTVFVD
EAYIEVASYASMSILSTNLLHSAMIIDQTPLTRRCLAQALAQQFFGCFISRMSWSDEWVL
KGISGYIYGLWMKKTFGVNEYRHWIKEELDRIVEYELRTGGVLLHPTLTGVKEKEMPAAN
LHFSIRHPHTMSWRYYKMFQCKAHLVLRLIENRISMEFMLQVFNKLLSLASTASSQKFQS
HMWSQMLLSTSGFLKSISNVSGKDIQPLIKQWVDQSSVVKFFGSFAFNRKRNILELELKQ
DYTSLGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLLNGE
EVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVVAQEESISALA
KFPTPASRLALTDILEQEQCFYKVRMGACFRLAKIANSMVSTWTGPPAMKSLFTRMFCCK
SCTNIVKTNNFMNFQSYFLQKTMPVAMALLRDVHNQCPKEVLAFILDLIKYNDNRKNKFS
DNYYRAELIDALANSVTPAISINNEIRTLDNLNPDIRLILEEITRFLNMEKLLPSYRNTI
TVSCLKAIRVLQKNGHIPSDPSLFKSYAENGHFVDVRIAALEAVVDYTQVDRSTDELQWL
LDLVQNDPVPYIRHKVLSMLNKNPPFTKSAESPLCNEALVDQLWKLMNSGTSHDWRLRCD
GVDMYYTLFGLSRPSCLPLPELGLVLNLKEKKTVLNPIIIPDPGASNPEAMGNPSIHGPM
AGYQISEEDHLAKDSISSGSGIQQGVKRKAETPLGSPLEPGQILEKDEDNSKVKLKIKFS
NSQEDEEIDMESVHDSQAFIYHHLNILERPSTPGKETAATEPSIISLPTVPLPSLVKDSS
SSKHGEHHHHHHHEHKKKKKKHKHKHKHKHKHEGKDKEKDLFAFVSSPASGRSPNSPSIS
D
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggaagaagagcgataaggggtttgagagtccgcggccttataaactaactcac
caggtggtctgcataaataatataaacttccagaggaagtctgttataggttatgtggag
ttgactatatttccatcagttgccaacctcaacagaattaaattgaacagcaagcaatgt
cggatttacagagtaagagtaaatgatttagaagctgctttcatttacaatgatccaaca
ctcgaagtctgccatcatgaatcaaagcagagaaatctaaattattttgccaatgcctat
acagcagcagtcagtgctgttgacccagacactggaaatggagaactgtgcatcaaggtt
ccatctgaactatggaaacatgttgatgagatgaaggtcttgaaggtatatatagaattt
tccttggaccagccaaagggaggtctccattttgtggtgcccgatatggaaggcagcatg
gctgagagaggtgcacatgccttctcctttggctatgaaaactgtacaaggttctggttt
ccctgtgttgactcgtactctgaactgtgcacgtggaaacttgagttcacagttgacgct
gctatggtcgcagtttcaaatggagatttggtggaaacaatttatacccatgacatgagg
aagaagactttccattacactctgactattcctacagcagctccaaatatttcactagca
gttggtccctttgaaattctggtggatccttacatgcatgaggtaacgcacttctgttta
ccccagctgcttcctctcctcaaacataccacatcctttcttcatgagatttttgaattt
tatgaggagattttgacctgccgatacccatatgcctgttacaagactgtatttgttgat
gaagcttatatagaagttgcttcctacgcatctatgagtattttaagcacaaacctcctg
cacagtgccatgattatagatcagacgccgcttaccagacgctgtttagcacaagctttg
gctcagcagttctttggctgctttatttccagaatgtcgtggtcagatgagtgggtgttg
aaagggatctcgggatacatttatggcctttggatgaagaagacctttggtgtgaatgag
tataggcactggatcaaagaggaactggacagaatagtcgaatatgaattgagaaccggt
ggcgttttactgcatcccacgttgactggggtgaaagaaaaagaaatgcctgctgcaaat
ctgcacttttcaatccggcatcctcatacaatgtcctggaggtattacaagatgtttcaa
tgtaaagcccacctggtgctgcgactcattgagaacaggatcagtatggaatttatgctg
caggtcttcaacaagctgttgagtttagccagcactgcatcatcccagaagttccagtct
cacatgtggagtcagatgctgctgtcaacaagtggctttttgaaatccatctctaatgtg
tctggaaaagatatccaacctttaataaaacagtgggttgaccagagtagcgttgtgaag
ttcttcggcagcttcgcatttaataggaaaagaaacattttggagttggaactgaagcaa
gattacacatcgttgggcacccagaaatatgtgggaccactgaaagtgacagttcaagaa
ctggatgggtcatttaatcacactctgcaaattgaggagaacagcttaaaacacgatatt
ccttgccactccaagagcagacgaaataagaaaaagaagatcccactgttgaatggggaa
gaagtggacatggatctttctgcaatggatgctgattctccattgctgtggataaggatc
gacccagacatgtctgttttgagaaaggtggaatttgagcaggctgatttcatgtggcag
taccagctccgctatgaaagggatgtagttgcacaggaagaatcgatttctgcgttagca
aagtttcctactccagcatctcgtctagctctaactgatattttggaacaagaacagtgt
ttctacaaagtccgaatgggagcttgctttcgtctggcaaagattgcaaattccatggtg
agcacttggacagggccaccagccatgaagtcgctgttcactcgcatgttctgctgcaag
agttgtacaaatatcgtcaagaccaacaatttcatgaactttcaaagctactttctgcag
aagactatgccagttgcaatggcattgctgagggatgtccataaccagtgtcctaaagaa
gtgctggcctttattttggatctaattaaatacaatgacaacagaaagaataagttttca
gacaattattaccgtgctgagcttatagacgcacttgcaaactcagtgacacctgcaatt
agcatcaataatgaaattcgaacattagataacctgaaccctgatatccggctgattctg
gaggagatcaccagatttctaaacatggagaaactgcttccaagctatagaaacacaatc
actgtcagttgcctgaaagctattcgagtgctgcaaaagaatggtcatattcctagtgat
ccttcactcttcaaatcatatgcagaaaatggtcactttgttgatgtgcgcattgcagcc
ttggaagcagttgtggactacacgcaagtggacagaagcactgatgaactgcaatggctg
ctagatctggtccaaaatgatcctgtgccttatataaggcataaggttttgagcatgctg
aataagaatccaccgtttaccaagagtgcagaatctcctctgtgcaatgaggccctggtg
gaccagctctggaaactaatgaactcagggacttcgcatgactggagactgagatgtgat
ggtgtggacatgtactataccttgtttggccttagcagaccttcttgtctccctctgcct
gagcttggcctggtcctcaacctcaaagaaaagaagactgtgctgaaccctatcattatc
cctgacccgggagcaagtaatccagaggctatgggcaatccaagtattcatggaccaatg
gctggttaccagataagtgaggaggaccatcttgccaaagattcgatatccagtggatct
ggaattcagcagggcgtaaagagaaaggctgagaccccacttggttccccactggaacct
ggccagatcctggagaaagatgaagacaacagtaaagtcaaactgaaaattaaattttct
aattctcaggaagatgaggagattgatatggaatctgttcatgatagccaagcttttatt
taccaccacttgaacattcttgagcgtccatccactccaggcaaagaaacggcagccaca
gaaccatctattatctcattaccaactgtcccacttccttcactggttaaagattctagc
tcatctaagcatggcgagcaccaccatcaccaccatcatgaacacaagaaaaagaagaag
aaacataaacataagcacaagcataaacataaacatgaaggaaaagacaaagaaaaggac
ctatttgcatttgttagcagcccagcgagtggacggtctccaaactctccttcaatttcg
gactaa
DBGET
integrated database retrieval system
