Callorhinchus milii (elephant shark): 103188100
Help
Entry
103188100 CDS
T03088
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103188100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmk03021
]
103188100
03036 Chromosome and associated proteins [BR:
cmk03036
]
103188100
Transcription machinery [BR:
cmk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103188100
Coactivators
SAGA/TFTC/STAGA complex
103188100
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
103188100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
DUF1955
DUF3243
Motif
Other DBs
NCBI-GeneID:
103188100
NCBI-ProteinID:
XP_007906140
UniProt:
A0A4W3JAY9
LinkDB
All DBs
Position
Unknown
AA seq
754 aa
AA seq
DB search
MNPSNNQPHCTVTSSILAASSPVSINAMVKPAITVITQPHAGVTKAGTAAPITASQSQPS
RPGIAAPQRVLTQQLIVRPQQQPTVQLAPGFTIPPGMILVRTESGQLVMVPQQALAQAQA
QRPGNISPRPCAPTSGPTFRLTSTQQSMTLSSIRPAAPVQAKLITPTATPLSAGSATVTM
VTRSPICVSSSSPQTVYTTAVAGVTGHHMSVQQTPAQQPSIAGGQPQASPRTPLQPQPAT
KLHTQVHLQPQVVPSSPLAGTAAVAQIPSVSQSLPLVRGGQEIQENVKKCKNFLATLIKL
ASHSGQSADTSRNVKGLVQDLLDAKIEPEEFTNRLQSELKSSPQPYLVPFLKKSLPALRQ
SLAHNQQSILQVHTPATAPSQATSTPLSTGTITAIVAGPTVRLRQPTTVAVTPTQISLTP
GRSSHLIVQSPTQTVKRQSVSPGAQVRMPMMITPSIRPVGKTWPGSKSTASVTLAVSATQ
RIKHTDPGGGAFKDDDDINDVASMAGVNLSEESARILVTNSSLVGACVHSCKDEAFLASG
PLHRRMLETAKRFGISDIPVDIVNTVSHATQERLKTVIGKLTSIAQHRMEVHKDEEWYEQ
ATDVRTQLKFFEQLERLEKQRKDDLEREILLKAAKSRSRQEDPEQARLKQKAKEMQQQEL
AQMRQRDANVTALAAIGPRKKRKLDFPGQAGAGVTTESENAASTPGLQAGPGASAGRQYT
RQRVTRVNLRDLIFYMEQEPETSHSLTLYRALLK
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgaacccttccaataaccagccccactgtacagttaccagctccatcctggcagcgagc
agtcctgtttctatcaatgctatggtcaagcccgcaatcactgtgatcacacagcctcat
gccggagtgactaaggcggggacggctgcccccataacagcctctcagtcacagccttct
cgtcctgggatagcagcacctcagcgtgtcctcacccaacagctcatagtcaggcctcag
caacagccaacagtccagctggctcctgggtttaccatcccaccaggtatgattctggtt
cgcacagaaagtgggcagcttgtcatggttccccagcaagctttagcccaggctcaggct
caaagaccaggaaacatctctccgaggccttgtgctcccacaagtgggcctacgttccgc
ctgacatcaactcagcaatccatgacgctctcctcaatccggccagcagccccagtgcaa
gccaagctcatcacacccactgccacccccctcagtgccggctccgccaccgttaccatg
gtgacacgctcccccatttgtgttagcagcagcagcccacagacagtatacaccacggcc
gtggcaggtgtcactggccaccacatgtctgtccagcagactccagcacagcagcccagc
atcgctggaggccaaccccaggcttcacctcggactccgcttcagccccagcctgcaacc
aaactacacacacaggtccacctacaaccccaggtggtcccaagctccccactggcagga
acagctgctgtagcacagatcccgtcagtgtcgcagtctcttcctctggtgcgaggaggg
caggagattcaggagaacgtgaagaaatgcaagaacttcctggccaccctgatcaagctg
gcatcacacagtggccaatcggctgatacctcccgcaacgtcaagggccttgtccaggac
ctgttggatgccaagattgaaccggaggaatttacaaacaggcttcagtctgagctcaag
tcatccccacagccatacttggtgccttttctgaagaaaagtttaccagccttgaggcaa
tctcttgctcacaaccagcagtctatcctccaagtgcatacaccggccacagctccctca
caggccacgtccaccccgctgtccacaggaaccatcaccgctattgtggccggacccacc
gtgcgtctgcggcaacctaccaccgtggccgtgactcccacccagatcagcctgacacca
ggacggagctcacatctgattgtgcaatccccaacccagacagtaaagaggcaaagtgtt
agtcctggggctcaggtcaggatgccaatgatgattacgccgtccatcagaccagtgggg
aagacatggccggggagcaagagcacagcaagtgtcacgcttgctgtctcggcgactcag
aggatcaaacacaccgaccctggaggtggcgccttcaaggacgacgatgacattaacgat
gttgcctcgatggccggtgttaatctcagtgaggagagcgcccggatcctggtcaccaac
tccagcttggtgggagcgtgcgtccactcctgcaaggacgaggcctttctagccagtggg
cccctgcatagacgcatgctggaaacggctaaaaggtttgggatctcagacattccagtc
gacatagtgaacacggtctctcacgcaacgcaggaacggttaaaaacggtcatcggaaaa
ttaacatcaattgcacagcacaggatggaagtgcacaaggacgaggaatggtatgaacaa
gcgacagatgttcggacacagctgaaattctttgaacagctggagcggctcgaaaagcaa
aggaaggatgatctggagcgggagatcctattaaaggcagccaagagccgctccaggcaa
gaagaccctgagcaggcccggctgaagcagaaagcgaaggagatgcagcaacaggagctg
gcacagatgaggcaacgagatgccaacgtgactgcactcgctgccattgggccacgcaag
aaacgtaagctggacttccctggccaggcgggtgctggggtgaccacagagagtgagaac
gctgcctccacaccagggcttcaggctggacccggggcctcggctggccgtcagtacacc
cgccagcgagttacacgcgtgaacctcagggacttaatcttctacatggaacaggagcca
gagacgtcccactcgctcacactgtaccgagctctgctgaaatga
DBGET
integrated database retrieval system
