Callorhinchus milii (elephant shark): 103188254
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Entry
103188254 CDS
T03088
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103188254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmk03041
]
103188254
Spliceosome [BR:
cmk03041
]
Complex B
Other components
Prp19-related factors
103188254
Complex C
103188254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
Nup35_RRM_2
zf-CCCH_2
RRM_YTH1
zf-CCCH
RRM_3
RRM_occluded
zf-CCCH_4
zf-CCCH_10
zf-CCCH_3
zf-CCCH_PARP12
zf-CCCH_12
RRM_PARP14_3
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
103188254
NCBI-ProteinID:
XP_042196044
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MLAAKQAVGSCLSPKTVRTTGTRGNMCDSGCCLQIQGSDGTRPVGALGKATSSSDMLLKL
ARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVA
DKLLKRAATMPRLDPPEDRSITTLYVGGLGEQICETELRNHFYQFGEVRSITVVQRQQCA
FIQFASRQAAELAAEKSFNKLIINGRRLNVKWGRSQAARGKEKDGSPESGMKLEPVPGLP
GVLPPPVSVEEETPPNFFNLPPSAPATVMNISLPPPPPGFGPTVFHSMPPPPPPFLRAPG
PIHYPSQDPQRMGAHTNKPNNA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgttggcggccaaacaagcggttgggtcctgtttgtccccaaaaaccgtccgcacaaca
gggacacgtgggaacatgtgtgattctggttgttgtctgcagatccagggctctgatggg
acgaggccagtgggggcgctgggcaaggccaccagctccagtgacatgctgctgaagctg
gctcgtaccaccccttactacaagcgtaaccgcccccacatctgctccttctgggtcaaa
ggcgagtgcaagagaggagaggagtgtccctacagacacgagaagcccacggaccctgac
gaccctctggctgaccagaacattaaggaccgttattacggcatcaatgacccggtggct
gacaagctgctgaagcgagcggccaccatgccccggctggacccccccgaggacaggagc
atcaccaccctgtatgtgggggggctcggagagcagatttgtgagacagagctacggaat
cacttttaccagtttggggaggtccggtcgatcacggtggtgcagagacagcaatgtgcc
tttatacagtttgccagtagacaggccgcagagctcgctgctgagaaatccttcaacaaa
ctcatcatcaacggccgccggctcaacgtcaagtgggggaggtcacaggccgcgcggggg
aaggagaaggacgggagcccggagtcggggatgaagctggagccggtgccggggctgcca
ggagtcctgccgccccccgtctcagtggaggaggaaactccccccaacttcttcaacctg
ccgcccagcgccccggccacggtgatgaacatctcgttaccccctccaccacccgggttc
gggcccacagtcttccactctatgcctccgccacctccacctttcctccgggccccgggc
cccatccactacccctcccaggacccccagcgcatgggagctcacacgaacaagcccaac
aacgcctag
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