KEGG   Callorhinchus milii (elephant shark): 103188254
Entry
103188254         CDS       T03088                                 
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103188254
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmk03041]
    103188254
Spliceosome [BR:cmk03041]
 Complex B
  Other components
   Prp19-related factors
    103188254
 Complex C
    103188254
SSDB
Motif
Pfam: zf-CCCH_RBM22 RRM_1 zf_CCCH_4 Torus Nup35_RRM_2 zf-CCCH_2 RRM_YTH1 zf-CCCH RRM_3 RRM_occluded zf-CCCH_4 zf-CCCH_10 zf-CCCH_3 zf-CCCH_PARP12 zf-CCCH_12 RRM_PARP14_3 zf-CCCH_DUS3L
Other DBs
NCBI-GeneID: 103188254
NCBI-ProteinID: XP_042196044
LinkDB
Position
Unknown
AA seq 322 aa
MLAAKQAVGSCLSPKTVRTTGTRGNMCDSGCCLQIQGSDGTRPVGALGKATSSSDMLLKL
ARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVA
DKLLKRAATMPRLDPPEDRSITTLYVGGLGEQICETELRNHFYQFGEVRSITVVQRQQCA
FIQFASRQAAELAAEKSFNKLIINGRRLNVKWGRSQAARGKEKDGSPESGMKLEPVPGLP
GVLPPPVSVEEETPPNFFNLPPSAPATVMNISLPPPPPGFGPTVFHSMPPPPPPFLRAPG
PIHYPSQDPQRMGAHTNKPNNA
NT seq 969 nt   +upstreamnt  +downstreamnt
atgttggcggccaaacaagcggttgggtcctgtttgtccccaaaaaccgtccgcacaaca
gggacacgtgggaacatgtgtgattctggttgttgtctgcagatccagggctctgatggg
acgaggccagtgggggcgctgggcaaggccaccagctccagtgacatgctgctgaagctg
gctcgtaccaccccttactacaagcgtaaccgcccccacatctgctccttctgggtcaaa
ggcgagtgcaagagaggagaggagtgtccctacagacacgagaagcccacggaccctgac
gaccctctggctgaccagaacattaaggaccgttattacggcatcaatgacccggtggct
gacaagctgctgaagcgagcggccaccatgccccggctggacccccccgaggacaggagc
atcaccaccctgtatgtgggggggctcggagagcagatttgtgagacagagctacggaat
cacttttaccagtttggggaggtccggtcgatcacggtggtgcagagacagcaatgtgcc
tttatacagtttgccagtagacaggccgcagagctcgctgctgagaaatccttcaacaaa
ctcatcatcaacggccgccggctcaacgtcaagtgggggaggtcacaggccgcgcggggg
aaggagaaggacgggagcccggagtcggggatgaagctggagccggtgccggggctgcca
ggagtcctgccgccccccgtctcagtggaggaggaaactccccccaacttcttcaacctg
ccgcccagcgccccggccacggtgatgaacatctcgttaccccctccaccacccgggttc
gggcccacagtcttccactctatgcctccgccacctccacctttcctccgggccccgggc
cccatccactacccctcccaggacccccagcgcatgggagctcacacgaacaagcccaac
aacgcctag

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