Callorhinchus milii (elephant shark): 103188345
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Entry
103188345 CDS
T03088
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk02010
ABC transporters
cmk04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103188345
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103188345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmk02000
]
103188345
Transporters [BR:
cmk02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
103188345
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
103188345
NCBI-ProteinID:
XP_042198563
LinkDB
All DBs
Position
Unknown
AA seq
2261 aa
AA seq
DB search
MGFWIQLRLLLWKNFTFRKRQTVQLIIELLWPLFLFFILISVRQSHPPFEQHECHFPNKA
LPSAGTLPWIQGIICNVNNPCFQHATPGETPGNVGNFNQSIISRLFADAQKVLRHANQDR
TLASFQQLLTVLNQLERKRSDLAGIPIRDYLRPDQTLSQFLRKNASLPQNVVRDLMMAHL
APEQVVLASAGGSLKPLVCNKSRLAKVLSSANKNSFERMQQSLCAVPEETLEQAKRLFLT
QVDLGKLLRDSLPSSPESMLEVMDAMEHFIQGMSSLLQEFSQVTSFRDFRDEVQWLTNAP
TGGSPKLMFQAISRIVCGHPEAGGLRVPSLNWYEDNDYKLLFGRNSTDQKAISFDNSTPP
HCKDLVRNLESNPISRIMWRGIKPLFIGKILYTPNTPTTWKIMKEVNRTFEELSLLREVR
GSWAEIGPQIWKFLESSREVHLLQKMLRNPSVSELVDLQLNSSGWDAASVATFLSNGSAE
PSSSAGYTWKRAYGEVDQMIHSLSKVIECVSLNKLEAVATEDVLVVRALELLEERQFWAG
VVFQMNESETPDLQPHITYKIRMDIDDVTRTNKIKDRFWDPGPSADPFDDLRYIWGGFVY
IQDLVEGALVRVLTGSDQKTGIYLQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVAMI
IKGMVHEKEARLKETMKIMGLSNGILWVSWFISSFIPFLISSAFLILILKKGSILPYSDP
SVVFLFLATFAIATIMQCFLISTFFSGANLAAACGGIIYFSLYLPYVLCVAWRDHVTYPL
RIAASLLSPVAFGFGCEYFSLYEEQGIGIQWFNLGSSPVEGDAYNFNTSLFLMLFDAGLY
GVATWYIEAVFPGQYGIPKPWFFLFLRSYWCGEPLPQNKLDFDACSMTKVHLEEEPTHLP
LGVSIQNLVKVYRNGEKMAINGLSLNFYQGQITSFLGHNGAGKTTTMSILTGLFPPTSGT
AYILGRDIFTEMDLIRKSLGMCPQHNVLFDSLTVEEHIWFYGRLKGLTEEEVNEEMRQIV
IDVGLPHKRTELTKNLSGGMQRKLSVAIAFVGGSKVVILDEPTAGVDPFSRRGIWELLLK
YKPGRTIILSTHYMDEADLLGDRIAIISHGKLCCCGSSLFLKNQLGTGYYLTLVKKEGDK
TPPASSSSVTIGIRKDDTDSERSYDTGLGSEQYSEASALDALAVSALVQRYVPEARLVEE
VGQELTYVLPYVGAKDGAFVELFQELDTRLCELGISSYGISDTTLEEIFLKVAEDTGVDT
NIAAFADGAIPSKRGRVSRPSEQTLQPVSEEGDGGNPDADPEHRETDFLQITDGKGSHQL
HGWRLTCQQFQSLFTKRFLYARRSRRGLFAQIVLPALFVFVALLFSLIVPPFGKYPALEL
QPWMYEEQFTFISEDVPEEASTKRLISALLNNPGFGTKCMKDRPEDTPCEGSGSDWAPPP
LAPALMDMLLNGNWTAEFPSPGCECSSKNNKRMLPECSAGAGGMPPPQVPRNTGDTLQNL
TGRNISDYLVKTYPQIISKSLKSKKWVNEFRYGGFSLGARSSQILPSVTEINRSISEIRS
WLNVTQGSSTDRLLGRVTEFMNGLSTRNNVKIWFNNKGWHSMVSFVNVMNNAVLRANLPP
GQDPEMFGITAFNHPLNLTKEQLSEVALMTTSVDVLVSICVMFAMSFVPASFVLFLIEER
VSQAKHLQFVSGVKPSVYWLANFAWDMCNYSIPATLVVSIFICFQQKSYVSASNLPALIL
LLFLYGWSITPLMYPASFLFSIPSTAYVVLTCVNLFIGINGSIATFVLELFTDKKLNDVN
RILKKVFLIFPHFCLGRGLIDMVKNQAMADALERFGEKQFISPLSWELAGKNMFAMAVQG
LLFFSFTLLLQYKFFITVRPMSIKLPPLGPEDEDVARERQRVAEGGAEADILVIKELTKV
YRMKKQPSVNRISVGIPSGECFGLLGINGAGKTSTFKMLTGDTEVTSGNAFLNNHSILSD
IQAVHQNTGYCPQFDAITKLLTAREHLMLYAQLRGVPEPEVARVAEWGIRKLGLVNYADR
PAGTYSGGNRRKLSTAIALIGCPAVVFLDEPTTGMDPKARRFLWNCILSVIKEGRCVVLT
SHSMEECEALCTRMSIMVNGQFRCLGSVQHLKSRFGDGYTIVLRLCGLASDLPPVEEFMG
ASFPGCVLKERHPNMLQYQLPATHCSLAKIFSALTSNRQRLRIEDYSVSQTTLDQVFVNF
AKDQSDEDQHTKAVPPDQPSEALQRHITSFLTDDTVKESIV
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atgggcttctggatccagctccgacttctcctgtggaagaacttcacctttcgtaaacga
cagacagtgcagctgattatcgagctcctgtggcctctctttctcttcttcatattaatc
tccgtgcgccagtcacacccgcccttcgagcagcacgaatgtcattttccaaacaaggcc
ttgccgtcagcgggaactctgccgtggatccagggaattatctgcaacgtgaacaacccc
tgcttccagcacgccacaccgggagagaccccaggaaacgtgggcaacttcaaccagtcc
atcatttcccggttatttgccgacgcccagaaggtgttgagacacgccaaccaggaccgg
acgctggccagcttccagcagctgctcaccgtactgaatcagctagagaggaaacgctca
gacctggcaggaatcccaatccgagactacctgaggccggatcagaccctctcccaattc
ctccggaagaacgcctcacttccccaaaatgtggttcgtgacctgatgatggcacattta
gccccggagcaggtggtcctggccagcgctggagggagcctgaagccgctggtttgcaac
aagtcccgcctggccaaggtcttgagctcagccaacaaaaatagctttgagcgtatgcag
cagagtctgtgtgccgttcccgaggagacgctggaacaagccaagcgcctcttcctcacc
caggtggaccttggcaagcttctgagggacagtctgccctccagcccggagagcatgctg
gaggtgatggacgctatggagcactttatccagggaatgtcgtctctcctccaggagttt
tcccaggtgaccagtttccgggatttccgggacgaggtgcagtggctgactaacgccccc
acgggagggtccccgaagctcatgtttcaggccatctcccgcatcgtgtgtggtcaccct
gaggcaggggggctgcgcgtcccctcactcaactggtatgaggacaacgactacaagctc
ttgtttggcagaaacagcacagaccagaaagccatcagcttcgacaattcaacacctcct
cactgcaaagatctggtcaggaatctagaatccaaccccatctctcgcatcatgtggcgg
ggaatcaaaccgctcttcattggcaaaatcctctacaccccaaacactcccaccacgtgg
aaaatcatgaaagaggtaaaccgcacgtttgaggagctgagcttgctgcgggaggtgcgg
gggtcttgggccgaaatcggcccccagatctggaagttcttggaaagcagccgggaggtt
cacctgcttcagaagatgctgaggaacccgtctgtgtcggagctggtggacctgcagctg
aactccagcggctgggatgctgccagcgtcgccaccttcctgtctaacggcagcgcggag
ccctccagctcggccggctacacctggaagcgagcgtacggggaggtggatcagatgatc
cactcgctgtccaaggtcatcgagtgtgtgtctctgaacaaactggaggcggtggccaca
gaggacgtgttggtggtccgagcgttagagctgctggaggagcgtcagttctgggctggg
gtggtcttccagatgaacgaaagtgagacccccgacctgcagccgcacatcacgtacaaa
atcaggatggacatcgacgacgtcactcggacaaacaagatcaaggacaggttctgggac
ccgggaccgtcagccgatccctttgacgacctgcgttacatctggggtggcttcgtatat
atccaggacctggtagagggggcactggtgagggtgctgaccggcagcgaccagaagacg
ggcatttacctgcagcagatgccgtatccctgctacgtggacgatgtttttttgcgtgtg
ttgaaccgctcgctacctctcttcatgaccctggcctggatttattcggtggccatgatc
attaaggggatggtccatgaaaaggaggcgcggctgaaagagaccatgaagatcatgggg
ctgagcaacggcatcctgtgggtcagctggttcatcagcagcttcatccccttcctcatc
agctctgccttcctcatcctgatcctcaagaaaggctcgatcctaccgtacagcgacccc
tccgtggtcttcctcttcctcgccaccttcgccatcgccaccatcatgcagtgtttcctc
atcagcaccttcttctcgggcgccaacctagccgcagcctgcgggggcatcatctacttc
tctctgtacctgccctacgtgctgtgtgtggcctggcgtgaccacgtcacataccccctc
cgcatcgctgcgagcctgttgtccccggttgccttcggctttggctgtgagtatttctct
ctgtacgaggagcaaggcatcggcatccagtggtttaacctgggctccagcccagtggag
ggtgacgcctacaacttcaacacctcccttttcctcatgctctttgatgctggcctgtac
ggagttgccacctggtacattgaggccgtctttccaggacagtacggcattcccaagccc
tggttcttcctgttcctgaggagctattggtgcggggagcccctgccacagaacaagctg
gactttgatgcatgcagcatgaccaaagttcatctggaggaggagcccactcacctgccg
ctgggtgtgtccatccagaacctggtcaaggtttacagaaacggggagaagatggcgatc
aatggcctcagcctcaacttctaccagggccagatcacctccttcctcggccacaacgga
gccggcaaaaccaccaccatgtctatcctgaccggcctgttcccccccacctcggggaca
gcctacattctgggccgagatatcttcactgaaatggatctgatcaggaaatcgcttggc
atgtgccctcagcataacgtgctgtttgacagtctaacggtggaggagcacatctggttt
tacgggcgtctgaagggtctgacggaggaggaggtgaacgaggagatgcggcagattgtg
atagacgtggggcttccccacaaacgtaccgaactgaccaagaacctgtcaggtggaatg
cagcggaagctgtcggtggccatcgccttcgtggggggctcgaaggtggtgatcctggac
gagcccacagcgggtgtggatcccttctctcgcagaggcatctgggaattactgctcaaa
tacaaaccaggccgcaccatcatcctgtccactcactacatggatgaggctgacctgctg
ggggacaggatcgccatcatctcccatgggaagctgtgctgctgtggctcctccctcttc
ctcaagaaccagctggggacgggctactacctgacattagtgaagaaagagggcgacaag
acccccccggccagctccagcagcgtaaccatcggcatcaggaaggacgacacggattct
gaacgcagctatgacacggggctgggcagtgagcagtacagcgaggccagcgccctggac
gcgctggcggtgtcggcgctggtccagaggtacgtgcccgaggcccggctggtggaggag
gtggggcaggagctgacctacgtgctcccgtatgtgggggccaaggacggggccttcgtg
gaactgtttcaggagctggacacccgcctgtgtgagctcggcatctccagctacggcatt
tccgacaccacactggaggagattttccttaaagttgcggaggacaccggggtagacacc
aacatagcagcttttgcggacggcgccatcccaagcaagcgcgggcgtgtctcgaggccc
agcgagcagaccctgcagcccgtcagcgaggagggggacggagggaaccccgacgcagac
cccgagcacagagagacagacttcctgcagatcacggacggcaaaggttctcaccagctg
catggctggcggctgacctgccagcaattccagtcgctcttcaccaagcgcttcctgtac
gcgcgacggagccgcagggggctgtttgcacagatcgtgttgccggccctgtttgtcttt
gtggctctgctcttcagcctcatcgtgccgcccttcggcaagtacccagcgctggagctg
caaccctggatgtacgaggagcaattcacgttcatcagtgaggacgtcccagaggaagcc
agcactaagcggctgatcagtgcactgctcaacaatcccggctttggaaccaagtgtatg
aaggatcgtccagaggacaccccgtgtgaggggagtggcagtgactgggcccctcccccg
ctggccccggccctgatggacatgctgctaaacgggaattggacggcggagttcccgtcc
ccggggtgtgagtgcagctcgaagaacaacaagcggatgttgccggagtgcagtgcggga
gccggggggatgccccctccccaggtgccgaggaacacaggggacacgctgcaaaacctg
actggccgcaacatctctgactacctggtgaagacctacccgcagatcatcagcaaaagc
ctgaaatcgaagaagtgggtaaatgagttcaggtacggaggtttctcactgggagcgagg
agctctcagattctgccgtcagtgactgaaatcaaccgttccatcagcgagatccgctcc
tggctcaacgtcacccagggaagctccacggaccggctcctgggcagagtcactgagttc
atgaacgggctgagcaccaggaacaatgtaaagatttggttcaacaacaagggctggcac
tccatggtgtcctttgtcaatgtgatgaacaatgcagtgctgagggccaacctccccccg
ggacaggatcccgagatgtttggaataacagccttcaaccacccactcaacctaaccaaa
gagcagctgtctgaggtggccctgatgactacgtcggtcgatgtcctcgtctccatctgc
gtgatgttcgcaatgtccttcgtccccgccagcttcgtcctcttcctcatcgaggagcgg
gtcagccaagccaagcacctgcagttcgttagcggggtcaagccctctgtgtactggctg
gcaaacttcgcctgggacatgtgtaattactcgattcccgccactctggttgtgtccatc
tttatctgctttcaacagaagtcctacgtgtcggcttccaacctgccagccctgatcctg
ttgctgtttctgtacgggtggtcgatcactcctctcatgtacccggcctcgttcctcttc
agtatccccagcaccgcctatgtggtcctgacctgcgtcaacctcttcatcggcatcaac
ggcagcatcgccaccttcgtcctcgagctcttcaccgacaagaagttaaatgacgtaaat
cggatcctgaagaaagttttcctcattttcccgcacttctgtctgggccgagggctgatc
gacatggtgaagaaccaggccatggcagatgctctggagagattcggagagaagcagttt
atctcaccgctgtcctgggaacttgccggcaagaacatgtttgcgatggccgtgcagggg
ctcctcttcttctccttcaccctcctcctgcagtacaagttctttatcaccgtcaggccg
atgtctatcaagctgccccctctggggcccgaggacgaggatgtagccagagaacggcag
cgagttgcggagggaggggctgaggcggacatcctggtcatcaaggaactcaccaaggtt
tacagaatgaaaaagcagccctcggttaatcgtatctctgtggggattccctcgggggag
tgtttcgggctcctgggaattaatggggccggaaaaacatccaccttcaagatgctgacc
ggagacactgaggtcaccagcgggaatgccttcctgaacaaccacagtatcctgtctgac
atccaggctgtgcaccagaacacgggttactgcccgcagtttgacgccatcactaagctg
ctgacggctcgtgagcacctgatgctctacgcccagctccgcggggtcccggagcccgag
gtcgcacgggtggctgagtgggggatcaggaagttggggttggtgaattacgcagacaga
ccggccgggacctacagtggaggaaaccgtcgcaaactctccaccgccatcgccctcatc
ggctgccccgccgtggtcttcctggatgaacccaccacggggatggaccccaaggctcgg
cggttcctgtggaactgtatcctgagtgtgatcaaggagggtcgctgtgtggtgctcacc
tcccacagtatggaggagtgtgaggctctgtgcacccgaatgtccatcatggtgaacggg
cagttccggtgcctcggcagtgtccagcacctgaagagcaggttcggagatggctacacc
attgtcctgcggctgtgtgggctggcctcagacttgccgcctgtggaggagttcatgggt
gccagcttcccgggctgcgtgctgaaggagcgacaccccaacatgctgcagtaccagctc
ccagccacccactgctccctcgccaagatcttcagtgccctgacctccaacaggcagagg
ctgaggatcgaggactactccgtctcacagacaacgttagaccaagtgtttgttaacttt
gccaaggaccaaagcgatgaggaccagcacacgaaggccgtgccccccgaccagcccagc
gaggctttgcagagacacatcacaagcttcttaacagacgatactgtgaaggaaagtatt
gtatga
DBGET
integrated database retrieval system
