Callorhinchus milii (elephant shark): 103188702
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Entry
103188702 CDS
T03088
Symbol
neo1a
Name
(RefSeq) neogenin 1a isoform X1
KO
K06766
neogenin
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04350
TGF-beta signaling pathway
cmk04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
103188702 (neo1a)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
103188702 (neo1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmk04515
]
103188702 (neo1a)
Cell adhesion molecules [BR:
cmk04515
]
Immunoglobulin superfamily
DCC/UNC5 family
103188702 (neo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
C2-set_2
Tissue_fac
Ig_5
C1-set
Ig_4
F5_F8_type_C
SusE
TMEM154
EphA2_TM
PRIMA1
Motif
Other DBs
NCBI-GeneID:
103188702
NCBI-ProteinID:
XP_007906969
LinkDB
All DBs
Position
Unknown
AA seq
1447 aa
AA seq
DB search
MAEPRVRLLLTLAALSSATGTSESVVRTFTPFYFTAEPADTLAIRGSSVILNCSVFTEPS
VKIEWKKDGTFLNLVSDERREVLPEGSLLIRNVVHSKHHKPDEGFYQCVATIDSLGTILS
RTARMTVSGLPRFSSQPEAISVHQGDSTLLNCEVNADLGPFVRWEQNRQPVALEGRFLKL
PNGALEISNVSDSVAGSYRCVVETPGSSKISEEAQLDVLPDMGMERKLLFLQHPVSVNKL
TGQTVILPCVVSGYPTPTITWTRNEESITESDSFQRMAFVGGGSLRINGVTEEDGGMYSC
IAKSENETLEIQAELNVQVPPHFLKGPDNIYARESMDIVFECEVTGKPTPTVKWIKNGDV
VIPSDYFKIVNEQNLQVLGLVKSDEGLYQCVAENDVGNVQASAQLIILEHDIPIPTFAPA
SLTSATTDHPAAATAELLSSAPRDVVALLVSTRFIKLTWRPPAEPKGEILMYSVYYSRDG
INRERVENTSGPGNLEVTIKDLMPEVKYVFRVIAHNKQGPGESSAPFKVATQPEVQVPGP
APNLQALTTSPTSITITWEAPLSGNGPVVNYKLYYMEKGAVSEQDVDVENLSYTMNGLKK
FTEYSFRVVAYNKHGPGVSTEDIVTRTYSDVPSAAPQNITVEVRNSKSIVVHWQPPPPGT
HNGVITGYNIRYKKGGRRGETDSTGGNQLSQIIDGLERNTEYSFRVSAITVNGTGPSSEW
LSAETFESDLDETRVPDVPSSLHVRPLTNSIVVSWTPPENQNIIVRGYAIGYGIGSPHAE
TIRVDYKQRYYTIERLEPNSHYVITLKAFNKVGEGIPLYESAATRPLTDPFDPSKVYLFD
PYTPVPDPSPMLPPVGVQATVLSHDTIRVTWADSSLPKNQKIIDARFYTVRWKTNYPANT
KFKTADTTTLSYIVSGLKPNALYEFSVRVTKGRRTSTWSMTAHGTTFETVPTSPPKDLTV
VSKEGKPKTIIVNWQPPSEANGRITGYIIYYSTDISAEIHDWVVEPVVGDRLTHQIQDLT
LDTTYYFKIQARNSKGMGPLSDFVQFRTPKQYGTSGKSGNSFVIESPPDPKHSTSGRNSP
HGSPTSNLDSNMMLVIIVSVGVFTIIIVVIIAVICTRRINTQQKKKHAACKSANGSHKYK
GNCKDVKPPDLWIHHERLELKPIDKSPDPNTVMTDTPIPRNSQDITPVDGSMEKEQHQRR
NSYLAHDLDEGSTLSGRRGMRPKMMMPFDAQPPQPVISAHPIHSLDNPHHHHHSGLYSPT
RSYLHHQINSRLLGSSVPVVDRAPPTESVRNTPSSDMSPAPSSQIHAAEHTEPDIPPVSY
MPASQEEESNRNVPTAHVRPSHALKSFAVPAIPPASTSTTYETASSSTPLLSQPGGNPQV
HSVKTASIGTLGRSRSPMPVTVPNAPDVAESAKMLEDSDSNYGPDELTEEMTHLKGLMKD
LNTITTA
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccccgcgtgcggctcctactgactctggcggcgctcagctcagctacaggc
acctcagagtctgtcgtcaggacgttcacccctttctacttcactgcagaaccagcagac
acgcttgcgattcgaggctcctcggttatactgaactgttcagtcttcactgaaccctct
gtcaaaatcgaatggaaaaaagatggaactttcctaaatctggtgtctgatgaacgccgt
gaggtgctgccggaaggctccttgttgatacgaaatgtggtgcattcgaagcaccacaaa
cctgacgagggattttatcagtgcgttgccaccattgatagtctgggaaccattctcagc
agaacagccaggatgactgtgtcaggtcttcctcggttcagcagtcagcccgaagcgatc
tccgtgcaccagggagacagcacccttctgaactgtgaagtaaacgccgacctcggtccc
tttgtgaggtgggagcagaaccgccagcccgtggcgctggaagggaggtttctgaagctg
cccaacggagctctggagatcagcaatgtctcagacagtgtggctggatcataccgttgc
gttgtggagacccctggttcatccaaaatcagcgaggaagcacagcttgacgttttaccc
gatatgggcatggagcgaaagctactgtttcttcaacatcctgtctctgtgaacaaactt
acaggtcagacagtaatattaccatgtgttgtctctggttatccaacacccaccattact
tggaccaggaatgaggaaagcatcacagaaagtgatagcttccaacggatggctttcgtt
ggtggcgggagtctgaggatcaatggtgtaacggaagaagatggtggaatgtacagttgc
attgcaaaaagtgaaaatgaaaccttggagatccaggcagaactgaacgttcaagttcct
ccccactttctgaagggtccagacaacatttacgctcgtgagtccatggacatcgtcttt
gagtgtgaggtgacaggaaaacctacaccaaccgtgaaatggatcaagaatggagacgtg
gtgattccgagcgattattttaagattgttaacgaacagaatctgcaagtgctgggcttg
gtgaagtcggacgagggtctgtatcaatgtgtggcagaaaacgacgtgggcaatgtccag
gccagtgcccagctcatcatcctggagcatgacattcccatcccaacatttgcccccgcc
tcactgacaagtgccactactgaccatccagcagccgccacggccgaactcctgtcctca
gcccctcgcgatgtggtcgctctcctcgtctccacacgtttcatcaagctgacctggcgt
ccaccagccgagcccaaaggagagatcctcatgtactctgtgtactactctcgggatggc
attaacagggaacgtgtggaaaataccagtggacctgggaatctggaggtaaccatcaag
gaccttatgccagaagtgaagtacgtcttccgagtcatcgctcacaacaagcagggtcca
ggagagagctcggccccattcaaagtggctacccagcccgaagttcaagttccaggtcca
gctcccaacctccaggctctgaccacttcgcccacctccatcaccatcacctgggaggca
ccgctctccggcaatggaccggttgtgaactacaagctgtactacatggagaaaggggca
gtgagcgagcaggatgtggacgttgaaaacctttcctacaccatgaatgggctgaagaag
ttcacggagtacagcttccgcgtggtggcttacaacaagcacgggcccggcgtctccacc
gaagacatcgtcaccagaacctattctgatgtgcccagtgcagctcctcagaatatcaca
gtggaagtgcgcaattccaagagcattgtggtccattggcagcctcccccaccgggcacc
cataacggagtgatcacaggttacaatatccgctacaaaaagggaggtcgccgtggcgag
accgacagcaccggagggaaccagctgtcacaaataatagatggattggagaggaataca
gagtacagtttccgagtctctgctattacagtcaacggcaccggcccctcctctgagtgg
ctgtcagctgaaacgtttgagagtgacctggatgaaacccgagtcccggatgtgcccagc
tctcttcatgtccgacctctgactaacagcatcgtggtgagctggacaccccccgaaaac
cagaacattattgtacgaggttatgcgattggctatggcattggcagcccccatgcagag
accatcagggtggattacaagcaacgctattacaccatcgaacggctggagcccaattcg
cactacgtgatcacactgaaggcgttcaacaaggttggggaaggaatcccactgtatgag
agcgcagccaccagacccctaactgacccctttgatccttctaaggtttatttatttgat
ccatacactccagtaccagaccccagccccatgctgccaccggttggagtccaggccact
gtgcttagccacgacactatccgggtgacgtgggctgacagctcactgcccaaaaaccag
aagatcatcgatgctcgcttctacaccgtacgctggaaaaccaactacccggccaacacc
aagttcaagacggcggacaccacaacgctgagctatattgtctcgggcctgaaaccaaac
gcgctgtacgagttttcagtgcgagtcactaagggacggaggacgagtacttggagtatg
accgcgcatgggaccacgttcgagacagtcccaacctctccacccaaagacctgaccgtg
gtgagtaaagaggggaagcccaagaccatcatcgtgaactggcagccaccctctgaggct
aatggcagaataacaggctacatcatctactacagtactgacatcagcgctgagatccat
gactgggtggtggagccagtggttggggaccggctgacacaccagatccaggacctgact
ctggacaccacctattacttcaaaatccaggcccgtaactccaaggggatgggccctttg
tcagactttgtgcagttccgcacacctaaacagtatggaacgtccgggaaatcaggaaat
tcctttgtgatcgagtctcctccggaccccaagcattccaccagtggtcgaaacagccct
cacggcagccccacatccaacctggacagcaacatgatgctggtcattatcgtttctgtg
ggcgtcttcaccatcatcatcgtggtcatcatcgccgtcatctgcacacgacggatcaac
acacagcaaaaaaagaaacatgcagcctgcaagtcagccaatgggtctcacaagtacaaa
ggcaactgcaaggatgtcaaaccccctgatttgtggattcaccacgaacggctggagctg
aaacctatcgacaagtcgccagatcccaacacggtcatgacggacactcccattccccgc
aattcccaggacattactcctgtggatggttccatggagaaggagcagcaccagagaagg
aattcctatctggcgcacgacctcgacgaggggtctacactgagtggacgccgcgggatg
cgaccaaagatgatgatgccatttgatgcacagcctccacaacctgtgattagtgctcat
cccatccattcacttgacaaccctcatcaccatcaccactccggcctttactccccaact
cgcagttaccttcatcaccagatcaacagccggctgctgggctcctctgtgccggtggta
gacagggctcctcctacagaatctgtacggaacacaccgagcagtgacatgtcaccggct
ccaagctcccagatccatgctgcagaacacacggagcctgacatcccacccgtgtcctac
atgccggcctcccaggaggaagaatccaaccgaaatgttcccacagctcacgtgcgccca
tcccatgcactgaaaagctttgcagtgcctgccatcccgcctgccagcaccagcaccacc
tacgaaactgcatcatccagtaccccattattatcccagccaggaggaaaccctcaggtg
cactcggtgaagacagcgtcaataggaactctggggaggagcaggtcacccatgccagtc
acagtgcctaacgcacctgacgtggcagaatctgcaaagatgctggaggactctgatagt
aattatggaccagatgaactcactgaagagatgactcacctcaaaggtttaatgaaggat
ctgaatactattaccacagcataa
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