KEGG   Callorhinchus milii (elephant shark): 103188702
Entry
103188702         CDS       T03088                                 
Symbol
neo1a
Name
(RefSeq) neogenin 1a isoform X1
  KO
K06766  neogenin
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk04350  TGF-beta signaling pathway
cmk04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    103188702 (neo1a)
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    103188702 (neo1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cmk04515]
    103188702 (neo1a)
Cell adhesion molecules [BR:cmk04515]
 Immunoglobulin superfamily
  DCC/UNC5 family
   103188702 (neo1a)
SSDB
Motif
Pfam: Neogenin_C fn3 I-set Ig_3 Ig_2 ig Pur_ac_phosph_N Ig_DSCAM-DSCAML_C V-set Interfer-bind C2-set_2 Tissue_fac Ig_5 C1-set Ig_4 F5_F8_type_C SusE TMEM154 EphA2_TM PRIMA1
Other DBs
NCBI-GeneID: 103188702
NCBI-ProteinID: XP_007906969
LinkDB
Position
Unknown
AA seq 1447 aa
MAEPRVRLLLTLAALSSATGTSESVVRTFTPFYFTAEPADTLAIRGSSVILNCSVFTEPS
VKIEWKKDGTFLNLVSDERREVLPEGSLLIRNVVHSKHHKPDEGFYQCVATIDSLGTILS
RTARMTVSGLPRFSSQPEAISVHQGDSTLLNCEVNADLGPFVRWEQNRQPVALEGRFLKL
PNGALEISNVSDSVAGSYRCVVETPGSSKISEEAQLDVLPDMGMERKLLFLQHPVSVNKL
TGQTVILPCVVSGYPTPTITWTRNEESITESDSFQRMAFVGGGSLRINGVTEEDGGMYSC
IAKSENETLEIQAELNVQVPPHFLKGPDNIYARESMDIVFECEVTGKPTPTVKWIKNGDV
VIPSDYFKIVNEQNLQVLGLVKSDEGLYQCVAENDVGNVQASAQLIILEHDIPIPTFAPA
SLTSATTDHPAAATAELLSSAPRDVVALLVSTRFIKLTWRPPAEPKGEILMYSVYYSRDG
INRERVENTSGPGNLEVTIKDLMPEVKYVFRVIAHNKQGPGESSAPFKVATQPEVQVPGP
APNLQALTTSPTSITITWEAPLSGNGPVVNYKLYYMEKGAVSEQDVDVENLSYTMNGLKK
FTEYSFRVVAYNKHGPGVSTEDIVTRTYSDVPSAAPQNITVEVRNSKSIVVHWQPPPPGT
HNGVITGYNIRYKKGGRRGETDSTGGNQLSQIIDGLERNTEYSFRVSAITVNGTGPSSEW
LSAETFESDLDETRVPDVPSSLHVRPLTNSIVVSWTPPENQNIIVRGYAIGYGIGSPHAE
TIRVDYKQRYYTIERLEPNSHYVITLKAFNKVGEGIPLYESAATRPLTDPFDPSKVYLFD
PYTPVPDPSPMLPPVGVQATVLSHDTIRVTWADSSLPKNQKIIDARFYTVRWKTNYPANT
KFKTADTTTLSYIVSGLKPNALYEFSVRVTKGRRTSTWSMTAHGTTFETVPTSPPKDLTV
VSKEGKPKTIIVNWQPPSEANGRITGYIIYYSTDISAEIHDWVVEPVVGDRLTHQIQDLT
LDTTYYFKIQARNSKGMGPLSDFVQFRTPKQYGTSGKSGNSFVIESPPDPKHSTSGRNSP
HGSPTSNLDSNMMLVIIVSVGVFTIIIVVIIAVICTRRINTQQKKKHAACKSANGSHKYK
GNCKDVKPPDLWIHHERLELKPIDKSPDPNTVMTDTPIPRNSQDITPVDGSMEKEQHQRR
NSYLAHDLDEGSTLSGRRGMRPKMMMPFDAQPPQPVISAHPIHSLDNPHHHHHSGLYSPT
RSYLHHQINSRLLGSSVPVVDRAPPTESVRNTPSSDMSPAPSSQIHAAEHTEPDIPPVSY
MPASQEEESNRNVPTAHVRPSHALKSFAVPAIPPASTSTTYETASSSTPLLSQPGGNPQV
HSVKTASIGTLGRSRSPMPVTVPNAPDVAESAKMLEDSDSNYGPDELTEEMTHLKGLMKD
LNTITTA
NT seq 4344 nt   +upstreamnt  +downstreamnt
atggcggagccccgcgtgcggctcctactgactctggcggcgctcagctcagctacaggc
acctcagagtctgtcgtcaggacgttcacccctttctacttcactgcagaaccagcagac
acgcttgcgattcgaggctcctcggttatactgaactgttcagtcttcactgaaccctct
gtcaaaatcgaatggaaaaaagatggaactttcctaaatctggtgtctgatgaacgccgt
gaggtgctgccggaaggctccttgttgatacgaaatgtggtgcattcgaagcaccacaaa
cctgacgagggattttatcagtgcgttgccaccattgatagtctgggaaccattctcagc
agaacagccaggatgactgtgtcaggtcttcctcggttcagcagtcagcccgaagcgatc
tccgtgcaccagggagacagcacccttctgaactgtgaagtaaacgccgacctcggtccc
tttgtgaggtgggagcagaaccgccagcccgtggcgctggaagggaggtttctgaagctg
cccaacggagctctggagatcagcaatgtctcagacagtgtggctggatcataccgttgc
gttgtggagacccctggttcatccaaaatcagcgaggaagcacagcttgacgttttaccc
gatatgggcatggagcgaaagctactgtttcttcaacatcctgtctctgtgaacaaactt
acaggtcagacagtaatattaccatgtgttgtctctggttatccaacacccaccattact
tggaccaggaatgaggaaagcatcacagaaagtgatagcttccaacggatggctttcgtt
ggtggcgggagtctgaggatcaatggtgtaacggaagaagatggtggaatgtacagttgc
attgcaaaaagtgaaaatgaaaccttggagatccaggcagaactgaacgttcaagttcct
ccccactttctgaagggtccagacaacatttacgctcgtgagtccatggacatcgtcttt
gagtgtgaggtgacaggaaaacctacaccaaccgtgaaatggatcaagaatggagacgtg
gtgattccgagcgattattttaagattgttaacgaacagaatctgcaagtgctgggcttg
gtgaagtcggacgagggtctgtatcaatgtgtggcagaaaacgacgtgggcaatgtccag
gccagtgcccagctcatcatcctggagcatgacattcccatcccaacatttgcccccgcc
tcactgacaagtgccactactgaccatccagcagccgccacggccgaactcctgtcctca
gcccctcgcgatgtggtcgctctcctcgtctccacacgtttcatcaagctgacctggcgt
ccaccagccgagcccaaaggagagatcctcatgtactctgtgtactactctcgggatggc
attaacagggaacgtgtggaaaataccagtggacctgggaatctggaggtaaccatcaag
gaccttatgccagaagtgaagtacgtcttccgagtcatcgctcacaacaagcagggtcca
ggagagagctcggccccattcaaagtggctacccagcccgaagttcaagttccaggtcca
gctcccaacctccaggctctgaccacttcgcccacctccatcaccatcacctgggaggca
ccgctctccggcaatggaccggttgtgaactacaagctgtactacatggagaaaggggca
gtgagcgagcaggatgtggacgttgaaaacctttcctacaccatgaatgggctgaagaag
ttcacggagtacagcttccgcgtggtggcttacaacaagcacgggcccggcgtctccacc
gaagacatcgtcaccagaacctattctgatgtgcccagtgcagctcctcagaatatcaca
gtggaagtgcgcaattccaagagcattgtggtccattggcagcctcccccaccgggcacc
cataacggagtgatcacaggttacaatatccgctacaaaaagggaggtcgccgtggcgag
accgacagcaccggagggaaccagctgtcacaaataatagatggattggagaggaataca
gagtacagtttccgagtctctgctattacagtcaacggcaccggcccctcctctgagtgg
ctgtcagctgaaacgtttgagagtgacctggatgaaacccgagtcccggatgtgcccagc
tctcttcatgtccgacctctgactaacagcatcgtggtgagctggacaccccccgaaaac
cagaacattattgtacgaggttatgcgattggctatggcattggcagcccccatgcagag
accatcagggtggattacaagcaacgctattacaccatcgaacggctggagcccaattcg
cactacgtgatcacactgaaggcgttcaacaaggttggggaaggaatcccactgtatgag
agcgcagccaccagacccctaactgacccctttgatccttctaaggtttatttatttgat
ccatacactccagtaccagaccccagccccatgctgccaccggttggagtccaggccact
gtgcttagccacgacactatccgggtgacgtgggctgacagctcactgcccaaaaaccag
aagatcatcgatgctcgcttctacaccgtacgctggaaaaccaactacccggccaacacc
aagttcaagacggcggacaccacaacgctgagctatattgtctcgggcctgaaaccaaac
gcgctgtacgagttttcagtgcgagtcactaagggacggaggacgagtacttggagtatg
accgcgcatgggaccacgttcgagacagtcccaacctctccacccaaagacctgaccgtg
gtgagtaaagaggggaagcccaagaccatcatcgtgaactggcagccaccctctgaggct
aatggcagaataacaggctacatcatctactacagtactgacatcagcgctgagatccat
gactgggtggtggagccagtggttggggaccggctgacacaccagatccaggacctgact
ctggacaccacctattacttcaaaatccaggcccgtaactccaaggggatgggccctttg
tcagactttgtgcagttccgcacacctaaacagtatggaacgtccgggaaatcaggaaat
tcctttgtgatcgagtctcctccggaccccaagcattccaccagtggtcgaaacagccct
cacggcagccccacatccaacctggacagcaacatgatgctggtcattatcgtttctgtg
ggcgtcttcaccatcatcatcgtggtcatcatcgccgtcatctgcacacgacggatcaac
acacagcaaaaaaagaaacatgcagcctgcaagtcagccaatgggtctcacaagtacaaa
ggcaactgcaaggatgtcaaaccccctgatttgtggattcaccacgaacggctggagctg
aaacctatcgacaagtcgccagatcccaacacggtcatgacggacactcccattccccgc
aattcccaggacattactcctgtggatggttccatggagaaggagcagcaccagagaagg
aattcctatctggcgcacgacctcgacgaggggtctacactgagtggacgccgcgggatg
cgaccaaagatgatgatgccatttgatgcacagcctccacaacctgtgattagtgctcat
cccatccattcacttgacaaccctcatcaccatcaccactccggcctttactccccaact
cgcagttaccttcatcaccagatcaacagccggctgctgggctcctctgtgccggtggta
gacagggctcctcctacagaatctgtacggaacacaccgagcagtgacatgtcaccggct
ccaagctcccagatccatgctgcagaacacacggagcctgacatcccacccgtgtcctac
atgccggcctcccaggaggaagaatccaaccgaaatgttcccacagctcacgtgcgccca
tcccatgcactgaaaagctttgcagtgcctgccatcccgcctgccagcaccagcaccacc
tacgaaactgcatcatccagtaccccattattatcccagccaggaggaaaccctcaggtg
cactcggtgaagacagcgtcaataggaactctggggaggagcaggtcacccatgccagtc
acagtgcctaacgcacctgacgtggcagaatctgcaaagatgctggaggactctgatagt
aattatggaccagatgaactcactgaagagatgactcacctcaaaggtttaatgaaggat
ctgaatactattaccacagcataa

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