Callorhinchus milii (elephant shark): 103188721
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Entry
103188721 CDS
T03088
Name
(RefSeq) LOW QUALITY PROTEIN: Down syndrome cell adhesion molecule-like protein 1 homolog
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmk04515
]
103188721
Cell adhesion molecules [BR:
cmk04515
]
Immunoglobulin superfamily
Other
103188721
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
Interfer-bind
V-set_CD47
Receptor_2B4
fn3_2
DUF1461
Motif
Other DBs
NCBI-GeneID:
103188721
NCBI-ProteinID:
XP_042199873
LinkDB
All DBs
Position
Unknown
AA seq
1909 aa
AA seq
DB search
MRGSVAVFKCLIPSSVQEYVRVVSWEKDTISIIPGSRFHITSYGALYISDVQKEDALSTY
RCITRHKYSGETRQSNGARLSVSDPMESAPTVLDSFKSREVWTGRSVELPCAASGYPNPA
IRWLKDSRPLPVDSRWTKRITGLTITGLRVEDSGTYICEVTNTFGSAEVTETLTVIDPLR
VMVTPKKLKMGIGSTVVLSCAVAGSPEYIIRWYRNTELIAPDNFISIRGINNETLLITSA
QKSHSGAYQCFATRKTQTAQDFSIIVLEDGTPRIISSFSEKVVNPGEQFSLMCAAKGAPP
PTITWTLDDETIHRDSGHRTSQFTMTDGTAISHMNVSHPQIKDGGVYCCSARNLVGSAEY
QARINVRGSPSIRSMRNITAVAGRDTFVNCRVIGYPYYSIKWYKDAVLLPDNHRQAVFEN
GTLKLVDVQKGMDEGEYVCSVLVQQQHSISKRVHVAVKVPPLIQPFEFPPASIGQLLYIP
CVVSSGDMPIRITWRKDGQVILSGSGVTIETKEFMSSLQISSVSLKHNGNYTCIASNDAA
TVMRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGNPQQYH
PVPLTGRIQILANGSLLIRHVLEEDIGYYLCQASNGVGTDISKSMFLTVKIPAMITSHPN
TTIAIKGQNKELNCTARGERPIIIRWEKEDTVIDPDRMFRYTVGTKDNGEEVVSTLRIVP
ADRGDSGFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRFDGNSL
ILGFDIEYKNKSDSWDLKQSTRNINPTINQANIVDLHPASVYSIRIYSFNKIGRSDPSKE
LTVSTEEAAPDGPPMEVILQPVTSQSIRVTWKAPRKELQNGVIRGYQIGYRENGPGSNGQ
YSIVEMKATGDNEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPDN
VKAVSISSDVVTISWSPPPRSTLNGVLKGFRVIYWSMHRDGDWGQMQNITTTKNRVELKG
LEKFTNYSVQVLAFTQAGDGVRSVVLYMQTKEDIPGPPSGIKAVPSSASSVVVSWLPPAK
PNGIIRKYTIFCSSPGSRQPAPSEYEASPETLYYRIPNLYQGQQYMLWVAAVTSAGRGNR
SEKVTVEPTLKAPAKIIAFGGTVTTPWMRDVVLPCRAVGEPVPTIKWTKDSEDSAIPVHV
DGQRMIYNNGSLALRSVKAEDSGYYTCTATNTWGFDTIIVNLLVQVPPDQPRLIVSDTSA
SSITLDWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFINPTERSFKLDNLKCGTWYKVKLA
AKNSVGAGRISEIIEAKTHGKEPAFNKDQHLFTHINSTHARLNLLGWNNGGCPIAVVVLE
YRAKGSWPWHSLRTNMSGEVFLQDLREATWYELKMRACNSAGCGNETTQFATLDYDGSTI
PPIKSLQGEGDDVKKLFTIACPVILATVAVVLLFIVRKKRKERRLKRLRDAKSLAEMLIS
KNNRSFDTPVKGQPQARLHIDIPRVQLLIEDKEGIKQLGEDKATIPPADAEFSQSVNPQS
FCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVARKSVKSAHSTRSRYSSQWTLTKCQAST
PARTLTSDWRTMGSQHGITVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEH
AKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMSTPSEAGICRFTASPPKPQ
DPERGKNVAVPIAHRAADYSNLPLYVKAEAFFRKTGIQDPCPAVPPREASIRNMARAYQT
QARHATLEAGGSKPPLHPHSTATLPQRTLTVPSTSGPAPSTMASACAPASAPTAPAPNVN
VSAASVEPRLPAHSKISGSKDSLLEMSTTGLNRSHKQGSAAYSKSYTLV
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggaagtgtcgctgtgttcaagtgcctcattccttcttcggtgcaagagtatgtc
agggttgtgtcgtgggagaaagataccatctccatcattccagggagtagattccacatc
acttcttacggagccttgtacatatccgatgtacagaaggaggatgcgctatcaacgtac
cggtgtatcacccgacataaatacagcggggaaacacgacagagcaatggagctcgcctc
tctgtttcagatcctatggaatcagcacctacagtgttggacagtttcaagtccagagag
gtctggacgggaagaagcgtggagcttccttgcgccgcctccggttacccgaaccccgcc
atccgctggctgaaggacagcagaccgttgccggttgacagccggtggaccaaacgcatc
accggcctcaccatcaccgggctacgtgtggaggacagcggcacttacatctgtgaagtc
accaacaccttcggttcggcagaggtgacggaaacgctgacagtgatagatccgctgagg
gtcatggtgacgccaaagaagctgaagatggggatcgggagcacggttgtcctgtcgtgt
gccgtggccggctcccccgagtacatcatccgctggtacagaaacaccgagctcatcgcc
cccgacaacttcatctccatcagaggcatcaacaacgagactctgctcatcacctccgct
cagaaatctcactcaggcgcctatcagtgctttgctaccagaaaaacccaaacggcacag
gacttctccatcatagtgctcgaagacggaacccctcgaatcatctcgtccttcagcgag
aaagtagtcaacccgggggagcagttttcactgatgtgcgcggccaagggggcgcccccc
cccaccatcacctggacgctggacgacgagaccatccaccgggacagcgggcaccgcacc
agccagttcaccatgacggacggcacggccatcagccacatgaacgtcagccacccgcag
atcaaggacggaggcgtttactgctgctcggccagaaacctcgtcggaagcgccgagtac
caagcgcgaataaacgtaagaggttcccccagtatccgctcgatgagaaacatcacagcc
gtggccggcagggacaccttcgtgaactgccgggtaatcgggtacccctattactccatc
aagtggtacaaggacgccgtgctgctccccgacaaccacaggcaggcggtcttcgagaac
ggcactctcaagctggtggacgtgcagaagggaatggacgagggggagtacgtgtgcagc
gtgctcgtgcagcaacagcactccatcagcaagagggtccatgtcgccgtcaaagttcct
cccttaatccagccgtttgagttcccgcctgcgtccatcggccagctcctgtacatcccc
tgtgtggtgtcgtcgggggacatgcccatccgcatcacctggaggaaggacggtcaggtc
atcctctcgggatcaggggtcaccatcgagaccaaagagttcatgagctcgctgcagatc
tccagtgtgtccctcaagcacaacggcaactacacctgcatcgccagcaacgacgcagcc
accgtcatgcgggaacggcagctcatcgtgagagtgcccccccgctttgtggttcagccc
aataaccaggacggtatctatgggaaggctggagtgctgaactgctctgtagacggctac
cctcccccaaaggtcatgtggaaacacgccaaaggcagtgggaacccacaacagtatcat
cccgtcccactgaccggacgcatccagatcttggctaatggctccctgttgatccgccat
gttctggaggaagatattggctattacctgtgtcaggccagcaatggggtcgggactgac
atcagcaagtccatgtttctgaccgtgaagatccccgccatgatcacatctcaccccaac
accaccatcgccatcaaaggtcagaacaaagagctgaactgcacagcgagaggagaacgg
cccatcattatacgctgggagaaggaagacacggtcattgaccctgacaggatgttccgc
tacacggtgggaaccaaggacaacggggaagaggttgtctccacactcaggattgtgccc
gctgaccggggagactcaggattcttctcctgccacgcaatcaattcatacggagaagat
cggggtctcatccagctcacggttcaagagccgcctgacccacctgagctggagatccgg
gaggtgaaagctcgcagtatgaacctccgctggactcagagattcgacgggaacagtctg
atcctcggcttcgatatcgaatacaagaacaagtcagattcctgggacctgaagcagagc
acacgaaacatcaaccccaccattaaccaggccaacatagtagacctgcatccagcctct
gtctacagcatccgcatatactccttcaacaagataggccggagcgatcccagcaaagag
ctgactgttagtacagaggaagcagctcctgatggacctcccatggaggttatattgcag
ccggtgacgtctcaaagcatcagagttacttggaaggcacccaggaaagagcttcaaaat
ggcgtgatacgaggctaccagattggttatcgggagaacggcccaggaagcaatggtcag
tacagtatcgtggagatgaaagccaccggtgacaacgaggtctacacgctggacaatctg
aagaagtttgctcagtatggggtcgtggtgcaggcgttcaacagagccggcacgggaccc
tcctcctccgagatcaacgccaccacgctcgaagatgttcccagccaacctcccgacaat
gtcaaagccgtgtccatctcctctgacgtggtgaccatctcctggtcccctccgcctcgc
agcacgctgaacggagtgctgaagggattccgagtcatctattggtccatgcaccgagac
ggagactgggggcagatgcagaacatcaccaccaccaagaacagagtggaactgaaaggg
ctggagaagttcaccaactacagtgtgcaggtcctagcgttcactcaggcgggcgacgga
gttcgcagtgtggtcctctatatgcagaccaaggaagacatcccgggacctccctctggg
atcaaagccgtgccctcctccgccagcagcgtggtggtgtcctggctgccccctgccaag
ccgaacggaatcatccggaagtacaccatcttctgctccagtcctgggtcgaggcagccg
gctcccagcgagtacgaggcttcgccggagactctgtattaccgtatcccgaacctgtac
caggggcagcagtacatgctgtgggtggcggcggtgacctcagccgggagaggcaaccgc
agcgagaaagtaaccgtggagccgactttgaaggctccggccaaaatcatcgcctttggg
ggtacggtgaccacaccctggatgagggacgtggtgttgccgtgtcgagccgtgggcgaa
ccggtgcccaccataaagtggaccaaagacagtgaggattccgccattccggttcacgtg
gacgggcagagaatgatctataacaacgggagcttggctctgcgctcagtcaaggcagaa
gattccggatattacacctgcacagcgaccaacacctggggcttcgataccatcatcgtc
aatctgctggtgcaagtgccccctgaccagccccgcctgattgtctcggacacctccgcg
tcctccattactctggactggattcccggtgacaacggagggagctctatcagagggttt
gtgttacagtattctgtggacaacagcgaggaatggaaggacgtcttcatcaaccccacc
gagagatccttcaagctggacaacctcaagtgcggcacgtggtacaaggtgaaactggcg
gccaaaaacagcgtgggagcaggacgcatcagcgagatcatcgaggccaagacacacggc
aaagaaccggctttcaacaaggaccagcacctcttcacccacattaactccacccacgcc
cggctcaacctgctgggctggaataacgggggttgccccatcgccgtggtggtcctggag
taccgtgccaagggcagctggccctggcactcgctccgaaccaacatgtcgggcgaggtg
ttcctgcaggacctgcgagaggccacctggtatgagctgaagatgagagcctgcaacagc
gccggatgcggcaacgagaccacccagttcgccaccctggattacgatggaagcaccatc
ccccccatcaagtctctacagggagagggggacgacgtgaagaagctgttcaccatcgcc
tgccccgtcatcctggccaccgtggccgtggtcctgctcttcatcgtcaggaagaagcgg
aaagagcggcgtctgaagagactgcgcgacgccaagagtttagccgagatgctgatcagt
aaaaataatcgcagcttcgacaccccggttaaaggtcagccccaggcccgcctccacatc
gacatcccccgcgtccagctgctgatcgaggacaaagagggcatcaaacagctgggagaa
gataaagccaccatccctccggcagacgctgagttcagccagtctgtaaacccgcagagt
ttctgcaccggggtctctctgcaccatccagctctgatccagaacacaggccctctgatc
gacatgtcagacatacggccaggtaccaaccctgtggcgaggaagagcgtcaagtcagcc
cacagcacccgcagcaggtactccagccaatggaccctcaccaagtgccaggcctccacc
ccggcccgcacgctgacctccgactggagaaccatggggtcacagcacggaatcacagtg
accgagagtgacagctacagtgccagtctgagccaggacacggacaaaggacggaacagt
atggtgtccacggagagcgcctcctccacttacgaggagctggccagagcgtacgaacac
gccaagctggaggagcaactgcaacacgccaagttcgagatcaccgagtgcttcatctcc
gacagctcgtccgaccagatgaccacgggaaccaacgagaacgccgatagcatgacctcc
atgagcaccccctccgaggccggcatctgccgcttcaccgcctcgccccccaagccccag
gaccccgagcggggcaagaacgtggctgtgcccatcgcacaccgagccgccgactacagc
aaccttcccttgtacgtgaaagccgaagccttcttccgcaagacaggaatccaggacccc
tgccctgccgtgcccccccgggaggcgtccatccgcaacatggcccgagcgtaccagacg
caggcgcgacacgccacgctggaggcggggggcagcaagccccccctgcacccgcactcc
accgccaccttacctcagaggactctgaccgtgcccagcacctcgggaccagccccctcc
accatggcctcggcctgtgcccccgcctctgcccccacggctcctgcccccaacgtcaac
gtctccgcggcctctgtggagccacgtctgcccgcacacagcaagatcagcggctccaaa
gactccctgttagaaatgagcacaaccggactcaaccgatctcacaaacaaggctcagcc
gcctactcaaagtcttacacactggtgtag
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integrated database retrieval system
