KEGG   Callorhinchus milii (elephant shark): 103188832
Entry
103188832         CDS       T03088                                 
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
  KO
K14315  nucleoporin NDC1
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103188832 (ndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmk03019]
    103188832 (ndc1)
Messenger RNA biogenesis [BR:cmk03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103188832 (ndc1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 103188832
NCBI-ProteinID: XP_007907156
UniProt: A0A4W3IJ26
LinkDB
Position
Unknown
AA seq 675 aa
MESAPGGRLVSKVLSWRAAAAIAWSVLLLPLSTFSFIFLSRISLLHPVQWATDSLQEMYN
SYTAFSLLVLAGIVVTIGTFNTEFYTVEPSIPCSRIALLGSVFHPQRLLHSVVHAALGVL
TAWCTTVLVGGRYHLMSAPSSQDSVGVEGLYLNEFHVFLLVGGAFFGYSYSLRYFINNMN
YLSFPAIQQFKYLRFKASLWLVVKYSAVQSFYFLRNYCLLYYFLGYVPRAWISASMSLQK
DSSVPALDTLSGLLDPPLLYVAWLSGTFLLLTWYLTWLLFKIFITEVYQFPVQLPFGEDA
DRCLPRVLTSKVSPLVKCLALQDLALLSQYSPCRRQEVFSLSQPGGHPHHWTAISSECLA
LLRDLTHTLTAYQEVAAGNGRVKAVPLTAEKRALGSSAEALGYNEAASYQPALRTSHLSH
TPRSSPLFKSSNSSVRSLLSFPFTPDLSSPFVSPMAPQQGEALDMASPCYGSLQSPHVMR
RGPKLWTSASRASGCIPTAEDYLVPVSCPTPETVRPSGLSHWLLHRQEQVKVFLSRRVPV
VYLFHKLPEASSQAVFANSQIHIWALEGLSHLTAASFTEDRYGVVQTTLASILSVLLSLQ
EAVDKHFKLPHACSRPARASGSLADSSYRTLRFALRSALKTSIYRITSTFGEHLGAVQVS
GEHRKRLQQFLTYKV
NT seq 2028 nt   +upstreamnt  +downstreamnt
atggagtcggcaccgggaggacggctggtcagcaaggtgctgagctggagggcagcggct
gccatcgcctggtctgtgctgctgctgcctctctccaccttctccttcatcttcctgagc
cgcatcagcctcctgcaccccgtccagtgggcaacagactcgctgcaagaaatgtacaat
tcgtacactgccttctccctgctggtgctggctggcatcgtggtgaccatcggcactttc
aacaccgagttttacactgttgagccttccatcccgtgcagtcggattgcgctgctgggg
agcgtgttccacccacagcggttactacattcggtggtgcacgcggcgctgggtgtgctg
actgcgtggtgcaccactgtgctcgtcggtggccgctaccacctcatgagtgccccttcc
tcacaggacagtgttggagtggagggcctgtacttgaacgagtttcacgttttcctgctg
gtggggggtgcgttcttcggctacagttacagtctccgatacttcatcaacaacatgaat
tacttgtcattcccagcaatccagcaattcaagtacctgcgtttcaaggccagcctgtgg
ctcgtggtgaagtacagcgctgtgcagtccttctacttccttcgcaactactgcctcctt
tactactttctaggttacgttcctcgagcctggataagcgcctcaatgtctctccagaaa
gacagttcggtaccagcgcttgacacactgagtggcctcttggaccctcctctcctgtac
gtggcctggctgagcggcaccttcctcctcctcacctggtacctcacctggctgctcttc
aagatcttcatcactgaggtttaccagttcccggtacagttgcctttcggtgaggacgcc
gatcgatgtcttcctcgagtcctgacgtccaaagtgtcaccacttgtgaagtgtctggct
ctgcaggacctggcattactgtcccagtattccccgtgccggaggcaggaggtcttcagc
ctgagccagccaggaggacaccctcaccactggacggccatctctagcgagtgcctggcg
ctgctccgggacctgacacacacactaacggcctatcaggaggtggcggccggcaatggc
agagtgaaggctgtaccactcaccgcagagaaacgggccctgggcagcagcgcagaggcc
ttgggctacaatgaggcagccagttaccagcctgcgctccgcacctcccacctttctcac
acgccccgcagctcgccgctgttcaagtcctccaactcctcagtgcggagcctgctcagc
ttccccttcacccccgacttgagcagccccttcgtctcgcctatggccccccagcagggc
gaggccctggacatggcctccccatgctacgggtcgttgcagagcccccacgtcatgagg
agggggcccaaactctggacatcagcttctcgagcctctgggtgcattcccaccgctgag
gactatctggttccagtcagctgcccgacccccgagacagtgcgccccagcggcctctcc
cactggctacttcaccgtcaggaacaggtgaaagttttcttgtcgcgccgagtgccggtg
gtgtatttgtttcataagcttccagaggcttcaagtcaggctgtgtttgccaacagccag
atacacatctgggcgctggaaggcctgtcccacctgacagcagcatccttcacagaggac
aggtatggagtggtgcagaccacactggcctccattctcagtgtcctgctctcccttcag
gaggctgtggacaaacacttcaagctgccgcacgcgtgcagtcggcctgcgagggccagc
gggagcctggccgactcctcctacaggacgctgcgcttcgccctgcgctccgccctcaag
acttccatctacaggatcaccagcaccttcggggagcacctcggggcggtccaggtctca
ggggagcacaggaagcgtctccagcagttcctgacctacaaggtgtga

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