Callorhinchus milii (elephant shark): 103188880
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Entry
103188880 CDS
T03088
Symbol
rc3h2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmk03000
]
103188880 (rc3h2)
04121 Ubiquitin system [BR:
cmk04121
]
103188880 (rc3h2)
Transcription factors [BR:
cmk03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
103188880 (rc3h2)
Ubiquitin system [BR:
cmk04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103188880 (rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
Prok-RING_4
zf-C3HC4_3
zf-CCCH_4
zf-C3HC4
zf-C3HC4_4
zf_CCCH_4
zf-C3HC4_2
zf-CCCH_UNK
FYVE
RING_XB3-XBAT31
Vesi_VP2
Motif
Other DBs
NCBI-GeneID:
103188880
NCBI-ProteinID:
XP_007907231
LinkDB
All DBs
Position
Unknown
AA seq
1148 aa
AA seq
DB search
MPVQASQWTEFLSCPICYNEFDENVHKPISLGCGHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDQQTVNLSNLAENKHYEIAKKCVEELALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTADPANLNRLRPHLELLANI
DPNPDAAPPTWEQLENAMVAVKTVVHGLVDFIQNFSKKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGANCTFAHSQEELEKYRMRNKKINATIRPFPLLNKPGITNLATTSAGSIVSVT
GITEATVKMVQISNGIISPESSTPQLIPRCADTSSSLEIAKKIGQSNLSTPGSLSGSPPE
NRIGSPPKTALNQMSSTSAIMSSRIGPDASLPPSKPGQFVPRVSVYPSQQPDVYYPDPRA
PVSYELPPYHQPGGYYPPHPGLPSGVTACLPRYARPNNIPESSLAPTVPYPEHCTAYPPR
ERLAASPYPSGPAQQYGSVPAIHSGMYAPVYDSRRMWRPQMYQRDDVMRSNSLPPMDVVP
SPAYQPPPRERYSSLDGYYSIPGPPLNEPRSVTMQRDLYSRSQPSGFDDPLRRKVDQWVH
YPTPKPPPVSSTLSTVAQPSAPPSPLFSVDFSSEFSENPSDLCVGTKFEDQHMSQYSPWS
CGTISSCISAMEPDPKDVMATTNVEIMDLDVKRRLNLFDPQRRGKDEDPIIPFGDGPIIS
KWGAISRSARTGYHNTDPIQATASQGSATKPISVTDYSSYVSHTDSSSWSSSALSYGSDS
TPPAQYLDRDRLGAADLSAHRKHPNGGDQLSIELQQGEFSEDSGDTRPDRDIELELSALD
TDEPDLNQDEEIEDVLDRQLGISSQGDPTSHMMSENEHHHKHRGEEQEEQGRRIAEQIAI
TEEQKVILPRTSCFNQPITASVGISTSPAMSASISINNLLLKTSAHRLSEDGNDMKPATN
GEALVNGS
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttcaagcgtcgcagtggacagaattcctttcttgtcccatctgctacaatgag
tttgatgagaacgtgcacaaacccatcagtttgggctgtgggcatactgtctgcaagacc
tgtctgaataaactacatcgcaaggcatgcccctttgatcagaccgccatcaacacagac
atcgatgttcttcctgtaaattttgcacttcttcagttagttggtgcacaggtcccagac
cagcagacagtcaatctgagtaacttggctgaaaataaacattatgaaattgcaaagaag
tgtgtggaggagctggctctctacttgaaaccgcttagtggaggaaagggtgttgcaagt
ttaaatcaaagtgcactgagtcggccaatgcaacggaaattggttaccctggttaactgt
cagttggtagaggaagaaggtcgtgttcgggcaatgcgagcagcaagatcactaggcgaa
aggacagttactgagcttattctgcagcatcagaacccccagcagttatcagccaatttg
tgggcagccgttagggcccgaggttgccagtttttggggccagccatgcaggaagaagct
ctaaaactggtattgcttgcattggaagatgggtcagcactctcgaggaaagtgctggtt
ctctttgttgttcagaggcttgaaccacggttccctcaggcgtctaaaactagtattggg
catgtggtccaactcttgtaccgtgcttcatgtttcaaggtaacaaaaagggatgaagac
tcttctctgatgcaactaaaagaggagtttcgtacctatgaagctttgcgtagagagcac
gatgcacagattgttcacattgccatggaggcaggacttcgaatttcacctgaacaatgg
tcttcccttctgtatggagacttggcacacaagtcacatatgcagtccataattgataag
ctccagtcgcccgaatcgtttgccaaaagcgttcaggaattgacaattgtcctgcagagg
accgcggatccagctaatttgaaccgactcagaccacatcttgaacttttggcaaatatt
gatcccaacccagatgctgcacctccaacatgggagcagctggagaatgcgatggttgct
gtgaagacagtggtccatggccttgtggattttatccagaactttagcaagaagggtcat
gaaacaccacagccacagccaaacagcaaatacaaaaccagcatgtgccgagacctgcga
caacagggaggctgcccacggggagctaattgtacatttgctcattcccaggaggagctg
gaaaagtatcggatgcggaataagaagatcaatgctaccatcaggccctttcctctgctg
aacaaacctggaatcactaatctagccaccacttctgcaggcagtatagtgtctgtaaca
ggaatcacagaagccactgtgaaaatggtgcagatatcaaacgggatcataagtccagaa
agtagtaccccacaactaataccacgctgtgcagatacctcgtcctctttggagattgct
aaaaaaattggacaaagcaatttgagtacacctggatcactatctggttcaccaccagaa
aatagaattgggtctcctcccaagacggctctcaatcagatgtcctctacctcggctata
atgtcttcacgtattggaccagatgcttcactacccccatcaaagcctggccagtttgtg
ccgagagtatctgtgtatccatcccaacaacctgatgtgtattatccagacccaagggca
ccagtttcatatgaactgcctccttatcaccaaccaggaggatattatcccccacatcct
ggtttaccatctggagtgactgcttgccttcctcgctacgcacgtccgaataacatcccc
gaatcctcacttgcacccactgtgccctaccctgaacactgcactgcatatccacctcgg
gaacggttggcagcttctccttatccatcaggacctgctcaacaatatggctccgtcccc
gctatccactctgggatgtatgcaccagtctatgacagcaggcgcatgtggagaccacaa
atgtatcaacgggatgatgttatgcggagcaattctttacctccgatggatgtggtgcct
tcgcctgcctatcagcctcctccacgggaacgatacagctcacttgatgggtattattcg
atacctggaccaccattaaatgaaccaaggagtgtcaccatgcagagggacctgtacagc
cggtcacagccctcgggctttgatgacccattaagacggaaggtcgatcaatgggtacac
tatccaactccaaaaccacctccagtctcgtccacactgtccacagtagcccaaccctct
gctcctccatcaccgctgtttagtgtcgactttagctcagagttctctgagaatcccagc
gatttgtgtgtaggcactaaatttgaggatcagcacatgtcccagtattctccatggtcc
tgtgggactatcagctcttgcattagtgcaatggagcctgatccaaaagacgtcatggca
acgaccaatgtggagataatggaccttgatgtgaaaagacggctaaatctatttgaccct
cagagaagaggcaaagatgaagatcccataattccatttggtgatggaccgatcatctcg
aagtggggtgcgatttctcggtctgcacgcacaggctatcacaacactgatccgatccag
gccacagcttcccaaggaagtgccaccaagcctatcagtgtaactgactatagttcctat
gtgagccatacagattccagtagttggagttcctctgccctttcatatggatcagattct
actccacctgctcaataccttgacagggaccgactgggagcggcagatctatcagcccac
aggaaacatcctaatggtggagatcagctaagtattgagctgcagcagggtgaattttcg
gaagattcaggcgacaccaggccggatcgggatatcgaactggagctttctgctctagat
actgatgaacctgatcttaatcaagatgaggaaatagaagatgtcctagatcgacagttg
ggtatcagctcccaaggtgatccaaccagtcacatgatgtctgagaacgaacatcaccac
aaacaccgaggtgaggagcaggaggagcagggccgcaggatcgcagagcagatcgcaatc
acagaggaacagaaggtgatcctacctagaacgtcctgcttcaatcagcccatcacagcg
tcagttggcatcagcacctccccagctatgtctgcatccattagcattaataacctgctt
ctgaaaacctctgctcacaggctatcagaggacgggaacgatatgaaacctgcaacaaac
ggcgaggctctagttaatgggagctga
DBGET
integrated database retrieval system
