Callorhinchus milii (elephant shark): 103188890
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Entry
103188890 CDS
T03088
Symbol
cfap54
Name
(RefSeq) cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cmk03037
]
103188890 (cfap54)
Cilium and associated proteins [BR:
cmk03037
]
Motile cilia and associated proteins
Sperm associated proteins
103188890 (cfap54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CFAP54_N
Ribosomal_L35Ae
CAP_N
Motif
Other DBs
NCBI-GeneID:
103188890
NCBI-ProteinID:
XP_042190951
LinkDB
All DBs
Position
Unknown
AA seq
2971 aa
AA seq
DB search
MFDGSAAQFLAILEAVTNSYRRVLHTGPPLPAETEVYDVLMELILAGVEILAGGGGNTQY
YMTSSTNPIAGIVELKSLIEMASAGEDGVSVEGVVRFVKAIFCYEHWDIFDNIIGPVFNF
LTSDENRTWRKYELDLELLLAMEPLLSNRKPKHGLQLREKCAGVGSFGAGRSNHWCDDFV
ILAETLYTYTCTTRENSVPDKDMVVDAVLFLWQKCKMVLQRTQIGLTDPIKYLQKIDHFG
KWIHILCLTEEVICWCNIGEIDPAVVAEVTLYLITLLENLVDSNLKPRKKSGFQVQDESQ
KPGIEQCFPSSIFKKKPVEKILVACKMAKKAIDSMDAARLIVASSNASSMVDSSRLKCIS
MGEKQLFHPMHCETQMKTTDKESSNKSASIHSFTMDLHLELIQAYHRLALKFIKLSPEED
IIANIKNNKISKALFLMQKALSLPNKGQISNTQKQLLEEVVSVLRKVEAEDKKLYHLNRD
QKSHPTENEGVVPAPILLYRAHNSMIFTPAPFNSSEKVYWYQIFGRIATGYNPKVRMNDC
HFLGTGQEVPASGKCFLKVGGLEPNEKYIFAVVAYSETGKIIGNTIGETTKPILACHPLP
ILTTWAYLCQYSYQLGHYPVAKLAFSVLWDHFVIAATNQDFAISLTEDWKIVPKSLCCTA
LQRASPILLRLFLGNIFISCDISVKEEEIFCDALCSNGPLLKGQLWRLAECEKMLVAIEL
AGWVNDNNQALQAVVQCYGLLAPVIWHMIPLVPVVQILIKCLSVLQEVLTTCKLKKQRAM
INSLQHMIACMTCHLAKVLRSWNEFDLAFAVINIGKKLLKSKVSDDESKAEEDPESVPQD
GWEKRAKQESVLLEKTLNEQVETVEAGLLQMSKEVVTKLTGNEDPSLLFGVILFSPIDSA
YEEVIKFKDSNRFLEFFNILIEKAIHLDQLSMVLEWVNLAESGLKHRKESTCNLKKNLKR
MHTPSQPETGKIAAAVVEYQHKPEYPSDSKKVKKAVAKLKDAKELYENKLNIQSEAKTRS
LKDIEDLRKSREKMEKKATQALEVILGPILREHAKRRKVRQKFADEMPFRSHMNLLFGFT
YFSLFIKSIEHHYKQGDQITTVINRYSFLDPAIFSLFNCGTVLLKDEEDKSTQVTIHESL
KLPPIRRKFSATWSRISDDSESNDNSECTDASEEDQAEEMLSEHEDELATMAEIQDQLGK
SFFYFKRAVVLAHRCYLWTALQNVCRGMWNCAHVAVMYVTGMEALPEPYPVTIKQVRSIF
SLPFYLASENLLDMVVHMQKIYSNVKFVDPDGIFVAPGFVEGISADKGGFSLRFEKEFDD
INVMDLRLVCDMVLYTLELLYFDEQWERLTDLAMHFNALTHERFIEKVTPVLVYAQRQLM
KRIREFNGPDPPQPHLLQTTKDSKDYINSRSFIASQMKIQMPIIEVVNQSSDLCFGVTRA
KALVGVPLDVNDTLSCFKDSLNKAHFLSRILRHSRKLFTLYLAYTQQQKLTRPKAIGFKL
GTAHIESCTPDFSNEEFLSFDSIQSKPVPESSLSLPISSYDKTIELLQAHRQNSLSAQAL
HELGNLHFCAGNKRSSFMCWCKAVDAALDMTNFLSNWRHLKKDKVNSGIESLKTSRDYSE
IFLDQAGIWGCLLAGVLTAKIAQYFASSDLKFRQDCCLVSALLFKSLFRSTLPYPRADYE
YASYEIGDGWPTHELIPGIDLFSDRFRIDVRSVVGSLRFVLYELHRTGQYLLALPLFTLY
QYFVTTICHDKQRSFEGRILKIKVLTDLAFFAEAFKEFSVVVHGEKVPHRILGCFKYVES
KNQMLFHNTKSLMAENNIMVLQELLNSSPPPDLCKLYGSRLMNKFKIAQTHFLIKIAETI
HQLPTTISEESQSLPRQTIEEDRVIDLDVAMPHLIIEHTQPRNPIVPQYERKVQKNMKID
LLSYKMMTPSKLKGILLTEAEFQLNALVLAVKKEYKGTDFTKLPAVGLEIIIEAKLQYAA
ISLQRLHVAFSAAIALSAIELLNKSQIYTKDKLTRSVASSSKMSATKTSPSQPPEKNADS
SPGQQCHNVEAHERIDIRLWLKCRLAFVTALTSHVYGVELNKEKDSILETSLLCAEGVEE
AKACGDIEMQTEFILQTVLLYLQLGQLKSDIKILLQNAVDLLNGRQFNSHRAKIMLAQSL
IQLADLKSLETDGKLSTTQNRIDLCISARNLLVQQLFLMGELVEQIPDDNCFTLVVPLKN
IYFPQLSVLTKVKLRLGHALARKALHDSSKTNSSPWIPALSELKATLDIWEATATREFNL
ESDILFQKGKVEHQLLEITEDPKLEGAKSLLDGINVNLFNEHNLWLIKQSYLEIALIYLR
VSAELDRETKTKPEAPVEKLTTSKTGSKRPKRKLSFNGAITGKGRLNEILLQILKHSPKY
ILPAWIALRAANQISEAITNRRLLPGNPSVDDQGLFQKTKQQIPQCAILDILASYEDFQT
DINELLPTFTTIQGEMLTNVQGSEGENSEENAEGNFEENVEVDTGIVIEIEGMIENQEGQ
IGEQFEGQFEQEAKGQVGEMFEETFEGKMEGKTEEKDEGTAAGKTKGESEKKMEEEVEGN
AEVKVEEKTERKTEENVEEGDEGKMKQDKYSIIFEKYQKEASQLTMIHLLRYKSHLYRLQ
NINLHSAGSEFKCLKEQLAKYSKQFNSTYNAAKPETETETDDESLSLHAVLDGLCTSVFD
TGTSLRLLAMHEFLTQNVFVYRTTCCGETPPKPLSELFEKPLRTSRIIQEQYYTTVFGEY
MIASPDESLTASKYTSTHIGKTVSAPTKELCIQWYLPTLDKPPQISEKQVLLIYAFNNKA
VTVISLKTCRVPHVNAGQKWIPLHGLLLLHEKLSELRQQAEALLQVREKTSSESPVHFGS
SEKRLGSATKTEALSEKSRKIQQLEDMTRLCCTQIKQLLLSKANIEPEPEIPFDVSISNL
QTLEKIFDPSRGHILSPGLLLDWIISFIIFV
NT seq
8916 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatggcagtgcagcccagttccttgctatactcgaggccgtgacaaatagctac
cggcgtgtgttacacacaggcccccctctccctgctgagaccgaagtatatgacgtgttg
atggaactgatcctagctggcgtggagatcctggcaggtggcggtggtaatactcaatat
tatatgacttcctccacaaatcctattgctggaattgttgaactcaagtcacttatagag
atggcatctgcaggagaagatggagtgtcagtggagggtgttgtgaggtttgtgaaggct
atattttgctacgagcactgggacatatttgacaacattattggcccagttttcaatttc
ctaacttcggatgaaaatagaacatggaggaaatatgagctggatttggaactgctgctc
gcgatggaacctttactatcaaatcggaaacccaaacacggtctccagctcagagaaaaa
tgtgcaggagttgggtcatttggggctggaagatccaatcactggtgtgatgattttgtg
atacttgcggagacactgtatacgtacacctgcactactagagagaactctgtgcctgat
aaggacatggtggtggatgctgtcctgtttctgtggcagaagtgtaagatggttttgcag
agaactcagattgggttgacagatcccattaaatacctacagaagattgatcactttggg
aagtggattcatatcctgtgcttgactgaagaggtgatttgttggtgcaacataggggag
attgacccagcagtggtggcagaagtgaccctgtatttaataacgttgctggagaacctg
gtggattcaaatttaaaacccaggaagaaatcaggtttccaggtgcaggatgagagccaa
aagccgggaattgagcagtgcttcccatcaagcatcttcaagaaaaagccagttgaaaag
attcttgtggcctgtaaaatggctaagaaggcgatcgatagcatggatgctgctcgctta
atagtcgcctcatctaatgcatcctcaatggtagacagttctcgtttaaagtgtatctct
atgggtgagaaacagcttttccacccaatgcattgtgaaacgcagatgaagactacagat
aaagaaagttccaacaaatcagcatctatccacagcttcaccatggatttacatctggaa
ctcatccaagcctatcacagactggcactcaaattcatcaagttaagtcctgaggaagac
atcattgctaacatcaagaataacaaaatatcaaaagctctgtttctaatgcagaaagct
ttgtcgttgcccaacaaaggacaaatcagtaatacccaaaaacaacttcttgaggaagtt
gtgtctgtgcttcggaaagtggaggctgaagataaaaagctctatcatttgaatagggat
cagaaatctcaccctacagaaaacgaaggtgttgtaccagctcctattctgctttacaga
gcacacaactccatgatattcacaccagctccgtttaattcatctgaaaaggtttactgg
tatcagatatttggccgtattgccacaggatacaatcccaaagtcaggatgaatgattgt
cactttctagggacaggacaagaggtaccagcatcagggaaatgttttttgaaggtagga
ggattggaacccaatgaaaaatacatctttgctgttgttgcctattccgagactggaaaa
ataattggaaacacaataggggagacgacaaagccaatcctcgcctgtcatcctcttccc
atccttacaacttgggcctatctttgtcagtattcgtatcaattgggacattatccagta
gcaaaattagctttttcagtgctttgggatcactttgtcatagcagcaaccaaccaggat
ttcgctatttctttaaccgaagattggaaaatagttccaaaaagtttatgctgtacggct
ttgcagagagcatcgcccattctgttgcggctttttctgggaaacattttcatcagttgt
gacattagtgtaaaggaggaagaaatcttttgtgatgctctctgtagcaatggaccactc
ctcaaaggacaactttggcgtttggctgaatgtgagaagatgctggtggcgatcgaactt
gccggctgggtcaatgacaacaatcaagcattgcaggctgtggtccagtgctatggactt
cttgcacctgtgatctggcacatgattcctttagtgccagttgtgcagatcctcatcaaa
tgtctgagtgttctacaagaagttctcactacctgcaagctcaagaaacaacgtgcaatg
atcaacagtttacaacacatgatcgcttgtatgacttgtcacttggcaaaggtgctgcgt
tcctggaacgagtttgatttggctttcgctgtaatcaatatcgggaagaaattgttgaaa
tcgaaagttagtgatgatgaaagcaaagctgaggaggatcctgagtctgtgccacaggat
ggttgggaaaaacgtgccaaacaggagtcagtgctgcttgaaaaaacattaaatgaacaa
gtggagacggtggaagcaggattgctacaaatgtccaaagaagttgtaacaaagctgact
gggaatgaagatccaagtttgctgtttggcgtcatcttattctccccaatagattctgct
tatgaagaagtgatcaaatttaaggattcaaatcgtttcctggagttctttaacatattg
atagagaaagctattcacttggatcagctcagcatggttttagagtgggtgaatcttgct
gaaagtggattaaaacatcggaaagagtccacttgtaatcttaagaaaaatctgaaaaga
atgcacactccttcacaacctgaaaccggtaaaatcgcagcagcagtggtggaatatcag
cataaacctgaatacccttctgatagcaagaaagtgaaaaaagctgtggccaaactgaaa
gatgccaaggagctgtacgaaaacaaactgaacattcagagcgaagccaaaacccgctcg
ctgaaagacattgaagaccttagaaagtcaagagagaagatggaaaagaaagccacacaa
gccttggaggttatactcgggcctatcctgcgggaacatgccaaacggaggaaggtgcgg
cagaagtttgctgatgagatgccgttccggagccacatgaacctgctgttcggtttcaca
tacttcagtttattcatcaagtccatcgaacatcattacaaacagggagatcagatcaca
actgtcataaacagatattcatttttggatcctgccattttctctctgtttaactgtggc
actgtgttgctcaaggacgaggaggataaaagcacacaagtgactatacatgaaagcctt
aaattaccaccaataagaaggaaattcagtgcaacttggagcaggatctctgacgacagt
gaaagcaatgacaattcagaatgtacagatgccagtgaggaagatcaggctgaggaaatg
ctttcagaacatgaggacgaattagcgactatggctgaaattcaggatcaacttggaaaa
tcgttcttttacttcaaaagagcagtggtacttgcacatcgctgctacctttggacagcg
ctgcagaatgtttgtcgagggatgtggaactgtgcacatgttgctgtgatgtatgtcact
ggtatggaagctttaccagaaccctatccagtaacaataaagcaagtccgaagcatcttc
tccctaccattttacttagcttcagaaaatcttctggatatggtggttcacatgcagaaa
atatacagtaacgtgaagtttgttgacccagatggcatctttgtggccccaggttttgtg
gaaggcatatcagccgataaaggaggatttagtttgagatttgaaaaagaatttgatgat
ataaacgtgatggacttgcgtttggtgtgtgatatggtgctgtacactttggaattgctg
tactttgacgaacagtgggagagattgactgacttggccatgcacttcaatgcattaaca
catgaaagattcattgagaaggtgacgcctgttctagtgtatgctcagagacagctgatg
aaaaggatacgagagttcaatggcccagatcctccccaaccccatttgttacaaaccaca
aaggattcaaaagactacataaattccagatcatttattgcatcccagatgaaaattcag
atgccaattatagaagtcgtcaatcaatcgtcagatttatgttttggggtaacgagagct
aaagcgttggtgggagtcccgctggatgtgaatgatacattgagttgtttcaaagactca
ttgaacaaggctcattttctcagtcgtattctcaggcacagcaggaaactgtttacgttg
tacctggcttacacacagcaacaaaaactcacaaggcctaaagccattgggttcaaatta
ggaacagctcatattgaaagctgtacacctgacttttcaaatgaagagttcctttcattt
gactccatccaatctaagcctgtacctgagtccagcctctcgctgcccatttcatcctat
gataaaactattgagctgcttcaagcacacagacagaactcgctgagtgcacaggcttta
catgaactcggaaacctgcatttctgtgcaggaaacaaaagatcatctttcatgtgttgg
tgcaaggctgttgatgcagctttagatatgacgaactttctcagcaactggcgtcacttg
aaaaaagataaagtgaacagcggtatcgagtcactgaaaacctccagagattacagtgaa
atatttttagaccaagctgggatctggggctgtctgctcgctggagtcttaactgctaaa
atagcgcagtattttgcatcttcagatttgaagttcagacaggattgctgccttgtatca
gccctgctttttaagagtctgttcaggtccaccctcccctatcccagggcagattatgaa
tatgcatcgtatgaaataggcgatggatggccgacacatgagctgattcctggaattgat
cttttctccgatcgattcagaattgatgtacgctcagtggtgggcagtttgagattcgtg
ctatatgagctgcatcgcactgggcaatacttattggctctacctttgttcacactgtat
caatactttgtcaccacaatctgccatgacaagcaaaggagttttgaaggacgaattctt
aagataaaggttttgacagacttggcgttctttgcagaagcttttaaagaatttagtgtt
gtggttcatggagaaaaggttccacatagaattctgggctgtttcaaatacgttgagtca
aagaatcaaatgttatttcacaatacaaaatcactgatggctgagaacaatatcatggta
ctccaggaattacttaacagcagtccgcccccggacttgtgtaaactttatggttcacgt
cttatgaataaatttaaaattgctcaaacgcattttctcatcaaaattgctgaaaccata
caccagctgccgacaactatcagtgaagaaagtcagagcttacccaggcaaactattgaa
gaagacagagttatagatcttgatgttgctatgcctcatctcatcattgaacatacacag
ccccgaaatccaattgtaccacaatatgagagaaaagtgcaaaaaaacatgaaaatcgat
ctcctctcctacaagatgatgactccgtccaaactgaagggaattctgttgaccgaggca
gaatttcaactgaatgctttggtgctcgctgtaaaaaaggaatataaaggcactgatttc
accaaacttcctgccgttgggttagaaattatcattgaggccaaactacaatatgcagcg
atctctctccagaggcttcatgtagcatttagtgctgccatcgctctctctgccatcgag
ctgctcaacaaaagtcagatctacacgaaggacaaactcactcgctcagtcgcatcctcc
tcaaaaatgtctgcaaccaaaacaagcccaagccagcctccggaaaagaatgctgacagc
agccccggccaacagtgccacaatgtggaagcccacgaacgcatagatatccgtctttgg
ctaaaatgtcggttggcttttgtgaccgcgttgacttctcatgtgtacggtgtggagctc
aacaaagagaaagattccatcctagagacgtccctgttgtgtgctgaaggggtggaggaa
gccaaagcctgtggtgatattgagatgcaaactgaatttatactgcagactgtcctgctt
tatctacaactgggacaattaaagagcgacatcaagatccttctgcagaatgcggtggat
ttactgaacggaagacagtttaattcacaccgagccaaaattatgttggcacaatccctg
attcaattggctgatttaaaatcactggaaaccgatggcaagctgagcaccacacagaac
cggatagacctgtgcatctctgcccgaaacctgcttgttcagcagctttttctgatggga
gaattagttgaacaaattcctgatgataattgtttcactctggtggtgcctttgaaaaat
atctactttccacagctttccgtgctaaccaaagttaaactgagactagggcacgcttta
gcaaggaaggctttacatgacagcagcaaaaccaattcatccccttggatcccagcgctg
tcggaactgaaggcaacgttagatatttgggaagccacggccaccagggagttcaattta
gaatctgatatcctcttccagaaaggaaaggtagagcatcagctgctggaaatcactgaa
gaccccaaacttgaaggtgctaaatctctattagacggcattaacgtcaacctgtttaat
gaacacaacctctggttgataaagcagtcatacctggaaatcgcgttgatttacctgcgt
gtgtctgctgagctggaccgggaaacaaaaacaaaacctgaagcacctgtagagaaattg
acaacatctaaaacaggttcaaaacgtccaaaaagaaagctctccttcaatggagcgatt
acaggcaaagggagattaaatgaaatacttctacaaattttgaagcattccccaaaatac
atattgccagcgtggattgctctccgagccgccaatcagatcagtgaagccataaccaat
cgacggttgctcccaggaaacccgtccgtcgatgaccaaggtctgttccagaagacaaaa
cagcagatcccacagtgtgcaatcctcgatattctagcttcatatgaagattttcagact
gacataaatgaattattgcccaccttcaccaccatccaaggagaaatgctgacaaatgta
caaggaagcgaaggagaaaatagtgaggaaaatgctgaaggaaactttgaagaaaatgtt
gaagtagacactggaatagtcattgaaattgagggaatgattgagaaccaagagggacag
attggggaacagttcgagggacagtttgagcaagaagctaaggggcaagttggggaaatg
tttgaggaaacatttgaagggaagatggagggaaagacagaggaaaaagatgaaggaaca
gctgcgggaaagactaagggagaaagtgagaaaaaaatggaggaagaggttgagggaaac
gctgaagtcaaagttgaggaaaagactgagagaaaaactgaagaaaatgttgaagaaggt
gatgaaggcaaaatgaaacaagacaaatattccatcatttttgagaagtatcagaaggaa
gccagtcaactgacaatgattcaccttctgcgctataagagccacctatacagactgcag
aacatcaacctacattctgctggatcagaattcaaatgtttgaaggaacaactggcaaaa
tacagtaagcagttcaattctacttataacgctgccaagccagaaacagaaacagaaaca
gatgatgagtctctctctctgcacgctgtgttggatggactttgtacatcagtgtttgac
accgggacttccctgcggctgttagcgatgcacgagtttctaacacagaatgtctttgtg
tatagaactacctgctgcggagaaactccacccaaacctctctctgaattgttcgaaaaa
cctctcagaacttcaaggattattcaagaacaatactacaccacagtgtttggagaatac
atgattgcatccccagatgaaagcctcactgcttccaagtacaccagcactcacatcggc
aagacagtgagtgctcccactaaagagctgtgtatccagtggtatttgccaaccttagac
aaacctccacagatctcagaaaaacaggttttgctgatctacgccttcaataacaaagct
gtcactgtgattagtctcaagacttgccgagtgcctcatgttaacgctggtcagaaatgg
attcctctacatggactactgttgctgcatgagaaactgtctgaattaagacaacaagct
gaggccttgttacaagtgagagaaaaaacatcttcagaaagtccagtgcattttggtagc
tcagagaaacgtttgggttctgcaaccaagactgaagcattaagtgaaaaatcccgtaaa
atccagcagctcgaggatatgacgagactttgctgcacccaaattaaacaactcttactt
tcaaaagcaaacattgaaccagaacctgagattccatttgatgtgtcaatctcaaatctg
caaactctggaaaaaatctttgatccttcgcggggacacatactgtcaccgggcctcctg
ctggactggattatttctttcattatatttgtttaa
DBGET
integrated database retrieval system
