Callorhinchus milii (elephant shark): 103189086
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Entry
103189086 CDS
T03088
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04620
Toll-like receptor signaling pathway
cmk04621
NOD-like receptor signaling pathway
cmk04622
RIG-I-like receptor signaling pathway
cmk04623
Cytosolic DNA-sensing pathway
cmk05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
103189086 (irf7)
04621 NOD-like receptor signaling pathway
103189086 (irf7)
04622 RIG-I-like receptor signaling pathway
103189086 (irf7)
04623 Cytosolic DNA-sensing pathway
103189086 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103189086 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmk03000
]
103189086 (irf7)
Transcription factors [BR:
cmk03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
103189086 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
MH2
Motif
Other DBs
NCBI-GeneID:
103189086
NCBI-ProteinID:
XP_007907546
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MGRTRMNHPKPQIRTWLIEQIDSAKYNGLRWLDHPDCTKFRISWKHASRQDLQEDDYSIF
KGWAIISGKYTEGDMTDPPKWKTNFRCALNSISSFQLLDDKSKESSDPHKVFLIKDHNPN
LSKKPQLNESVEEEDDLELRMSPETDFSYFTQLAFPHPQEHLDEMLTTMTLSDNPGENQW
EASHPVYLPNLCPYKPLMMEQFNNSLNIPYHEELRISPAQVVPNGLLWESMQPSVLPELA
HYAQEVPVAYETPQLPLNVPPLVAANGPAAELQHCHSIRNSLGVTVYYRGKAVLQRTVKT
GFRLLQNVQDTTCGHLEQIAFPSTESISDQKQKEFTDCLLSNVEGGLTLELRGQHIYAKR
TGKCQVFWSLTEVNESQESQKLMREKETRLFSLSDFLMEIKEFTEHRRGTPRCSIYLCLG
QYFPVRNPAKMLVLIKVVPKICSTLIELAQQGGASSLNSDNVNLQISNNSNDNFWAIVRE
LESSMEVDSACEPSTVITHSTQPYPNEFNYSEF
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgggcagaaccagaatgaaccacccaaagccacagatccggacatggttaattgagcag
atagacagcgccaaatacaatgggctgcgctggttagaccatcccgactgcaccaagttc
cgaatctcatggaaacatgcatccagacaagatctgcaggaggacgattatagtatcttt
aagggctgggctataataagtgggaaatacactgaaggagacatgactgaccctccaaaa
tggaagaccaatttccgttgcgccttgaacagcatcagttcgtttcagttgctggacgac
aagtcaaaggagtcctcagacccccacaaagtctttctcatcaaagaccataatcccaat
ctgtcgaaaaaacctcaactgaatgaaagcgtggaggaagaggatgatcttgagctgcgc
atgagcccagaaactgatttctcttactttacccagctagccttcccacatccacaggaa
catctggacgaaatgttgactacaatgactctgtcagacaatccaggagagaatcagtgg
gaggcgtcacatccagtatatcttccaaatctgtgtccttacaagcctctgatgatggaa
caattcaacaattcactcaatattccttaccatgaagaactccgcatttccccagcccag
gtcgtcccaaacggacttctgtgggaatccatgcagccatcagttctccccgagttggcc
cactatgcccaagaagttccagttgcttacgagacaccacagcttcctctgaatgtgcct
cccctggtggcagctaacggacctgcggccgaacttcaacactgccattccattcgaaac
agtttaggggtcactgtatactacagaggaaaagcagtgttgcagagaacggtcaagacc
ggattcaggttactccaaaatgtccaggacaccacctgtggtcacctcgagcagatcgcc
tttccaagcaccgagtccatatccgatcagaagcagaaagagttcaccgattgtctcttg
tcgaacgtggaaggagggcttacactggagcttcgaggacagcacatctatgctaagaga
acggggaagtgccaggtcttctggtctctcaccgaagtgaacgagagccaggaatcgcaa
aagcttatgagggaaaaagagaccaggctgttcagcttaagtgattttctgatggagatc
aaagagttcacagaacacaggcgtggaactcctcggtgctccatctacctttgtttgggt
cagtacttcccagttagaaatccagcaaagatgctcgtcttgatcaaggtggtccctaaa
atctgcagcacgctgatcgaacttgcacagcaaggaggggcttcgtctttgaacagcgat
aacgtcaacttgcagatctccaataactcgaacgataacttttgggcgatagtcagggag
ctggaaagctcgatggaagtagattcggcatgtgaaccctcaactgtgataactcactca
actcaaccctaccccaacgaatttaactattctgagttctga
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