KEGG   Callorhinchus milii (elephant shark): 103189086
Entry
103189086         CDS       T03088                                 
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
  KO
K09447  interferon regulatory factor 7
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk04620  Toll-like receptor signaling pathway
cmk04621  NOD-like receptor signaling pathway
cmk04622  RIG-I-like receptor signaling pathway
cmk04623  Cytosolic DNA-sensing pathway
cmk05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    103189086 (irf7)
   04621 NOD-like receptor signaling pathway
    103189086 (irf7)
   04622 RIG-I-like receptor signaling pathway
    103189086 (irf7)
   04623 Cytosolic DNA-sensing pathway
    103189086 (irf7)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    103189086 (irf7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cmk03000]
    103189086 (irf7)
Transcription factors [BR:cmk03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    103189086 (irf7)
SSDB
Motif
Pfam: IRF-3 IRF MH2
Other DBs
NCBI-GeneID: 103189086
NCBI-ProteinID: XP_007907546
LinkDB
Position
Unknown
AA seq 513 aa
MGRTRMNHPKPQIRTWLIEQIDSAKYNGLRWLDHPDCTKFRISWKHASRQDLQEDDYSIF
KGWAIISGKYTEGDMTDPPKWKTNFRCALNSISSFQLLDDKSKESSDPHKVFLIKDHNPN
LSKKPQLNESVEEEDDLELRMSPETDFSYFTQLAFPHPQEHLDEMLTTMTLSDNPGENQW
EASHPVYLPNLCPYKPLMMEQFNNSLNIPYHEELRISPAQVVPNGLLWESMQPSVLPELA
HYAQEVPVAYETPQLPLNVPPLVAANGPAAELQHCHSIRNSLGVTVYYRGKAVLQRTVKT
GFRLLQNVQDTTCGHLEQIAFPSTESISDQKQKEFTDCLLSNVEGGLTLELRGQHIYAKR
TGKCQVFWSLTEVNESQESQKLMREKETRLFSLSDFLMEIKEFTEHRRGTPRCSIYLCLG
QYFPVRNPAKMLVLIKVVPKICSTLIELAQQGGASSLNSDNVNLQISNNSNDNFWAIVRE
LESSMEVDSACEPSTVITHSTQPYPNEFNYSEF
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgggcagaaccagaatgaaccacccaaagccacagatccggacatggttaattgagcag
atagacagcgccaaatacaatgggctgcgctggttagaccatcccgactgcaccaagttc
cgaatctcatggaaacatgcatccagacaagatctgcaggaggacgattatagtatcttt
aagggctgggctataataagtgggaaatacactgaaggagacatgactgaccctccaaaa
tggaagaccaatttccgttgcgccttgaacagcatcagttcgtttcagttgctggacgac
aagtcaaaggagtcctcagacccccacaaagtctttctcatcaaagaccataatcccaat
ctgtcgaaaaaacctcaactgaatgaaagcgtggaggaagaggatgatcttgagctgcgc
atgagcccagaaactgatttctcttactttacccagctagccttcccacatccacaggaa
catctggacgaaatgttgactacaatgactctgtcagacaatccaggagagaatcagtgg
gaggcgtcacatccagtatatcttccaaatctgtgtccttacaagcctctgatgatggaa
caattcaacaattcactcaatattccttaccatgaagaactccgcatttccccagcccag
gtcgtcccaaacggacttctgtgggaatccatgcagccatcagttctccccgagttggcc
cactatgcccaagaagttccagttgcttacgagacaccacagcttcctctgaatgtgcct
cccctggtggcagctaacggacctgcggccgaacttcaacactgccattccattcgaaac
agtttaggggtcactgtatactacagaggaaaagcagtgttgcagagaacggtcaagacc
ggattcaggttactccaaaatgtccaggacaccacctgtggtcacctcgagcagatcgcc
tttccaagcaccgagtccatatccgatcagaagcagaaagagttcaccgattgtctcttg
tcgaacgtggaaggagggcttacactggagcttcgaggacagcacatctatgctaagaga
acggggaagtgccaggtcttctggtctctcaccgaagtgaacgagagccaggaatcgcaa
aagcttatgagggaaaaagagaccaggctgttcagcttaagtgattttctgatggagatc
aaagagttcacagaacacaggcgtggaactcctcggtgctccatctacctttgtttgggt
cagtacttcccagttagaaatccagcaaagatgctcgtcttgatcaaggtggtccctaaa
atctgcagcacgctgatcgaacttgcacagcaaggaggggcttcgtctttgaacagcgat
aacgtcaacttgcagatctccaataactcgaacgataacttttgggcgatagtcagggag
ctggaaagctcgatggaagtagattcggcatgtgaaccctcaactgtgataactcactca
actcaaccctaccccaacgaatttaactattctgagttctga

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