Callorhinchus milii (elephant shark): 103189427
Help
Entry
103189427 CDS
T03088
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103189427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103189427
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103189427
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103189427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
LepA_C
FlgM
Motif
Other DBs
NCBI-GeneID:
103189427
NCBI-ProteinID:
XP_042201034
UniProt:
V9KFM4
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVETFEDIWQKVEVHSAANANQKEKYEADLKKEIKKLQRL
RDQIKTWVASNEIKDKRQLQENRKLIETQMERFKIVERETKTKAYSKEGLGSATKVDPAQ
KEKEEICQWLTNTIDTLNMQVDLFESEMETLSAVTRKKKGEKEKQDRLEELKQHIERHRY
HVKMLETLLRMLDNSTIEVDQIKKIKDDVEYYVDSSQDPDFKENEFLYDDLDLEDIAQTS
IMATSPASNSNSNVEDELFIPCNSTPTSTTSSSPVPLSPANPLVENHEDERKRSRSDSEM
SMSPAKVIGSKPHHSNNLPPSIAISQSSQVLSSTRPPALPPNGSSNGGSKLLQASKSYSA
TQAPISVSAYAAAVATGTTTISSSSVGSISSSSFQARPANAVPIPATKQQNGTASYSAVV
AENSVEQPNSYSLPSSTNSQPSSTTPVQNSVKEPVSVSVANTTNIIPVLAASQVNTQASN
FTDLKPSTAMMNGPLPFVSQELKQAPETLSSLKSMAERAAVSAGLEEQIQSLHLNERDLF
STPPTQNNSMPPSVPQTTEVHLQPVLGVCPLSPVHLSKDQEYQLHMVESAWLHMPHPSDS
ERIRHYLPRNPCPTPPYHHQIPPVHSDTLEFYQRLSTETLFFIFYYLEGTKSQYLAAKAL
KKQSWRFHTKYMMWFQRHEEPKTITDEYEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRD
LQ
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaaggaaattgcaaggagagattgaccggtgtctgaagaaagtcagtgaa
ggtgtagaaacctttgaagacatctggcaaaaggtagaggttcacagcgcagcgaacgcg
aatcagaaggaaaagtatgaagctgacctgaagaaagagatcaagaaactacagaggttg
cgagaccaaataaaaacatgggtggcctccaacgaaatcaaggacaagaggcaacttcag
gagaacaggaagctgattgagacgcaaatggaaaggttcaagatcgtggaaagagaaaca
aagaccaaagcttactctaaagaaggattggggtcagcgaccaaggtggaccccgcacag
aaagagaaggaagaaatctgccaatggctgacgaatacaatagacactttaaacatgcag
gtcgacctcttcgaaagtgaaatggaaacgttatcagccgtgacgaggaaaaaaaagggg
gaaaaggagaaacaagaccgcttggaggaactaaaacagcacattgagaggcacaggtac
cacgttaaaatgctggaaacgctgctccgcatgttagacaacagtaccatagaagtggac
cagataaagaaaatcaaagacgacgtggagtactatgttgattcctcccaagatcccgac
tttaaagagaatgagtttttatacgatgaccttgatttggaggatatagcacaaacgtcg
ataatggccacctcgccggccagcaacagcaacagcaatgtggaggacgagctatttatc
ccgtgtaacagtacgcccacctccacaacctccagctcgcccgtgccgctcagtcctgcc
aacccgttagtggaaaaccacgaggatgaaaggaaacggagccgatcggacagtgaaatg
agcatgtctccagcgaaggtgattggcagtaaacctcaccacagcaacaaccttccgcca
tccatcgctatctcacagagctcccaggtgctgagcagcacgaggccgcctgcgttgccc
cccaacggctccagcaatgggggcagcaaactgctgcaggccagcaagagctactcggcg
actcaggcccccatctctgtgtcagcctacgcggcggctgtggccacgggcaccaccacc
atcagcagcagcagcgtgggcagcatcagcagcagctcgttccaggccaggccggccaac
gccgtgcccatccctgccaccaaacagcagaacggcaccgcaagttacagtgccgtggtg
gctgagaacagcgtggagcagccgaacagctacagtcttccttccagtacaaacagccag
ccgagcagcacgacgcccgtacagaacagcgtgaaagagcccgtcagcgtgtctgtagcc
aacacgacgaacatcatccccgtgctcgccgccagccaggtcaacacacaagcctccaac
ttcactgatctgaagcccagcacggccatgatgaacggacccttgcctttcgtctcacag
gaactgaagcaagctcctgagaccctgagctctttaaaaagcatggcggagcgggcggct
gtcagtgccgggctggaggaacaaatccagtctttgcacctgaatgagagggatctcttc
agcacaccgcccacccagaacaactccatgccccccagcgtcccacagacaactgaagtt
cacctgcagccagtgctcggcgtgtgcccgctcagcccagtgcatctttccaaggaccaa
gaataccagctgcacatggtggaatcagcctggctccacatgcctcacccctcagactct
gagaggatacgacactacctcccgcgcaatccgtgtccgacaccgccttaccatcaccag
attcctccggtccactctgacaccctggaattctaccagcgattgtccacagaaactctc
tttttcatcttttattacctggaggggaccaagtcccaatatttagctgcaaaagcactg
aagaagcagtcatggagattccacaccaagtacatgatgtggttccagaggcacgaagag
ccaaaaacaatcaccgatgaatatgaacagggaacatatatttactttgactacgagaag
tggggccagcgcaaaaaggaaggcttcacatttgaatacaggtacttggaggacagagat
ctgcagtaa
DBGET
integrated database retrieval system
