KEGG   Callorhinchus milii (elephant shark): 103189463
Entry
103189463         CDS       T03088                                 
Symbol
casc3
Name
(RefSeq) protein CASC3
  KO
K14323  protein CASC3
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk03013  Nucleocytoplasmic transport
cmk03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103189463 (casc3)
   03015 mRNA surveillance pathway
    103189463 (casc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmk03019]
    103189463 (casc3)
Messenger RNA biogenesis [BR:cmk03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     103189463 (casc3)
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 103189463
NCBI-ProteinID: XP_007908066
UniProt: A0A4W3IH81
LinkDB
Position
Unknown
AA seq 702 aa
MADRRRRRASQDSDEEDEEVPGAAVEVVPAAPRVIDLPAVQSREAESECESEDGIGGDAV
VLSDYESAEENGSQKSGGDDEDGEYSEEEGPKEEMKKINDENESLKEGKPEEKGTVTGER
QSGDGQESTDPVENKIGKKNRRQLDDDEDRKNPAYIPRKGLFFEHDLRGHAEPEEVRPKV
RQRKLWKDEGRWVHDKFQEDEQAPKSREELIALYGYDIRSDRNPDEIRPRRIRKPRFRSP
NRDPEWLAEPLPRPYLRKATGSEPTPRTFNHKMGGLERRSPAKSYYKHAYNEECENMRPG
EVNNSKSCQSTGNLSADESNLETQRLEQGWMQEIVADSLQSVKDNSSKRENTHVPSQTFA
AENVQQQVQEKTIEKKSYSRIRRTRNKVTEAGKPLLTEDASQPGLLAPADQQPVQAVSPP
ALKTGSWETPPAVDSPLAGLECEISQLNVSGQNWTPSGQPQYIQPRELHGISSSIHISSA
GAQYNRVEEMAIQGGRAKRYSSQRQRSVPDAPPPPPPPPPPPPPPAPGPAPAPLHIGLME
GHYYDPLQFQGPIYTHNESPAPLPPQGMIVQQDIHLPHPVPGFNHHQSPNHLTNSGLYAP
QVPMPTGQPPPQQMLAPSYFTPGMMNFGNPSYPYTPGGLPPHIYPTTQAQSQVYGGVTYY
NTVQQQVLPKPSPPRRPSQPVTVKPPPPEDNRNEKSKEMTDG
NT seq 2109 nt   +upstreamnt  +downstreamnt
atggcggacaggcggcggcggcgcgcgtctcaggacagcgatgaggaggatgaggaggtg
cccggggccgcagtggaagttgttcccgctgcccctcgtgtcattgatctacccgcagtt
caatctcgcgaggccgagtccgagtgtgagagtgaagatggcataggaggtgatgctgtt
gtactctcagactatgaaagtgcagaagaaaatggttctcagaaatctgggggtgatgat
gaagatggagaatacagtgaggaagaaggtccaaaggaggaaatgaaaaaaatcaatgat
gaaaatgaatccttaaaagaaggcaaacctgaagagaagggaacagtaacaggagagaga
cagagtggtgatgggcaggaaagtacagaccctgttgaaaataaaatagggaaaaagaat
agaagacaactagatgatgatgaggatcgaaaaaatcctgcctatatcccacggaaagga
ctgttctttgaacatgatctcagaggacatgctgaaccagaagaagtgaggcccaaggtt
cgtcaaaggaagctctggaaagatgaaggcagatgggtgcatgacaagttccaagaagat
gaacaagcgcctaaatctagagaagagctcattgctctttatggatacgacattcggtca
gacagaaatcccgatgaaatcaggccaagaaggataaggaaacccaggttcagaagtcca
aatcgagatccggaatggctggctgaaccactaccaaggccttacttgcgtaaagctacc
ggtagtgaaccgactccaagaacgtttaaccacaaaatgggaggtctagagcggagatct
ccagcaaagagctactacaaacatgcttataacgaagaatgtgagaatatgagaccagga
gaagtaaataattcaaaaagttgccaatctacagggaatttatctgctgatgaaagcaac
cttgagacacagaggcttgagcagggttggatgcaggagattgtggcagacagtttgcag
tcagtaaaggacaatagttccaaacgggaaaatacccatgttccaagccagacatttgct
gctgagaatgtgcagcagcaggtacaagagaaaactatagaaaagaaatcctactctcgc
attcgaaggaccaggaacaaggtcacagaggcaggaaagccattgctgactgaggatgct
tcccaaccaggattgttggctccagctgaccagcaacctgttcaagctgtctctcctcca
gcactgaagaccggctcctgggagactcccccggctgtggactcccctttggcagggctc
gaatgtgagatttctcaactgaacgtatcaggacaaaactggacaccaagtggtcagcca
cagtacatccaaccaagagaactccacggaatttccagttcaatacacataagtagtgct
ggagcacagtataaccgagtggaagagatggcaattcaaggaggtcgagcaaaacgttat
tcatctcaaaggcaacggtctgtacctgacgctcccccaccacctcctcctccaccaccg
ccgccaccaccaccagccccaggacctgctcctgcaccgctccacatcggcctgatggaa
ggacattactacgatccactacaatttcaaggacctatatacacacacaacgaaagtcca
gctcctttaccacctcaaggaatgattgtccagcaagacattcaccttcctcatccagtc
ccaggtttcaatcatcaccagtcacccaatcacctcactaactcgggattgtatgctcca
caagttcctatgccaactggacagccacctccacagcagatgcttgctccttcctacttc
acacctggaatgatgaactttggaaatcctagttatccatacacgcctggaggcctccca
cctcacatttatccaaccactcaggcccagtctcaagtctatggtggagtcacatattac
aataccgtacagcaacaggtgctgccaaagccatcccctcctaggagaccgtctcagccg
gttactgttaagccaccacctcctgaggacaaccgaaatgaaaagtctaaagaaatgact
gatggttaa

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