Callorhinchus milii (elephant shark): 103189463
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Entry
103189463 CDS
T03088
Symbol
casc3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03013
Nucleocytoplasmic transport
cmk03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103189463 (casc3)
03015 mRNA surveillance pathway
103189463 (casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103189463 (casc3)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103189463 (casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
103189463
NCBI-ProteinID:
XP_007908066
UniProt:
A0A4W3IH81
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MADRRRRRASQDSDEEDEEVPGAAVEVVPAAPRVIDLPAVQSREAESECESEDGIGGDAV
VLSDYESAEENGSQKSGGDDEDGEYSEEEGPKEEMKKINDENESLKEGKPEEKGTVTGER
QSGDGQESTDPVENKIGKKNRRQLDDDEDRKNPAYIPRKGLFFEHDLRGHAEPEEVRPKV
RQRKLWKDEGRWVHDKFQEDEQAPKSREELIALYGYDIRSDRNPDEIRPRRIRKPRFRSP
NRDPEWLAEPLPRPYLRKATGSEPTPRTFNHKMGGLERRSPAKSYYKHAYNEECENMRPG
EVNNSKSCQSTGNLSADESNLETQRLEQGWMQEIVADSLQSVKDNSSKRENTHVPSQTFA
AENVQQQVQEKTIEKKSYSRIRRTRNKVTEAGKPLLTEDASQPGLLAPADQQPVQAVSPP
ALKTGSWETPPAVDSPLAGLECEISQLNVSGQNWTPSGQPQYIQPRELHGISSSIHISSA
GAQYNRVEEMAIQGGRAKRYSSQRQRSVPDAPPPPPPPPPPPPPPAPGPAPAPLHIGLME
GHYYDPLQFQGPIYTHNESPAPLPPQGMIVQQDIHLPHPVPGFNHHQSPNHLTNSGLYAP
QVPMPTGQPPPQQMLAPSYFTPGMMNFGNPSYPYTPGGLPPHIYPTTQAQSQVYGGVTYY
NTVQQQVLPKPSPPRRPSQPVTVKPPPPEDNRNEKSKEMTDG
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggcggcggcggcgcgcgtctcaggacagcgatgaggaggatgaggaggtg
cccggggccgcagtggaagttgttcccgctgcccctcgtgtcattgatctacccgcagtt
caatctcgcgaggccgagtccgagtgtgagagtgaagatggcataggaggtgatgctgtt
gtactctcagactatgaaagtgcagaagaaaatggttctcagaaatctgggggtgatgat
gaagatggagaatacagtgaggaagaaggtccaaaggaggaaatgaaaaaaatcaatgat
gaaaatgaatccttaaaagaaggcaaacctgaagagaagggaacagtaacaggagagaga
cagagtggtgatgggcaggaaagtacagaccctgttgaaaataaaatagggaaaaagaat
agaagacaactagatgatgatgaggatcgaaaaaatcctgcctatatcccacggaaagga
ctgttctttgaacatgatctcagaggacatgctgaaccagaagaagtgaggcccaaggtt
cgtcaaaggaagctctggaaagatgaaggcagatgggtgcatgacaagttccaagaagat
gaacaagcgcctaaatctagagaagagctcattgctctttatggatacgacattcggtca
gacagaaatcccgatgaaatcaggccaagaaggataaggaaacccaggttcagaagtcca
aatcgagatccggaatggctggctgaaccactaccaaggccttacttgcgtaaagctacc
ggtagtgaaccgactccaagaacgtttaaccacaaaatgggaggtctagagcggagatct
ccagcaaagagctactacaaacatgcttataacgaagaatgtgagaatatgagaccagga
gaagtaaataattcaaaaagttgccaatctacagggaatttatctgctgatgaaagcaac
cttgagacacagaggcttgagcagggttggatgcaggagattgtggcagacagtttgcag
tcagtaaaggacaatagttccaaacgggaaaatacccatgttccaagccagacatttgct
gctgagaatgtgcagcagcaggtacaagagaaaactatagaaaagaaatcctactctcgc
attcgaaggaccaggaacaaggtcacagaggcaggaaagccattgctgactgaggatgct
tcccaaccaggattgttggctccagctgaccagcaacctgttcaagctgtctctcctcca
gcactgaagaccggctcctgggagactcccccggctgtggactcccctttggcagggctc
gaatgtgagatttctcaactgaacgtatcaggacaaaactggacaccaagtggtcagcca
cagtacatccaaccaagagaactccacggaatttccagttcaatacacataagtagtgct
ggagcacagtataaccgagtggaagagatggcaattcaaggaggtcgagcaaaacgttat
tcatctcaaaggcaacggtctgtacctgacgctcccccaccacctcctcctccaccaccg
ccgccaccaccaccagccccaggacctgctcctgcaccgctccacatcggcctgatggaa
ggacattactacgatccactacaatttcaaggacctatatacacacacaacgaaagtcca
gctcctttaccacctcaaggaatgattgtccagcaagacattcaccttcctcatccagtc
ccaggtttcaatcatcaccagtcacccaatcacctcactaactcgggattgtatgctcca
caagttcctatgccaactggacagccacctccacagcagatgcttgctccttcctacttc
acacctggaatgatgaactttggaaatcctagttatccatacacgcctggaggcctccca
cctcacatttatccaaccactcaggcccagtctcaagtctatggtggagtcacatattac
aataccgtacagcaacaggtgctgccaaagccatcccctcctaggagaccgtctcagccg
gttactgttaagccaccacctcctgaggacaaccgaaatgaaaagtctaaagaaatgact
gatggttaa
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