Callorhinchus milii (elephant shark): 103189646
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Entry
103189646 CDS
T03088
Symbol
xrcc5
Name
(RefSeq) LOW QUALITY PROTEIN: X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
103189646 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmk03400
]
103189646 (xrcc5)
DNA repair and recombination proteins [BR:
cmk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
103189646 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
Motif
Other DBs
NCBI-GeneID:
103189646
NCBI-ProteinID:
XP_007908297
UniProt:
A0A4W3JFY9
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All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MHRMCWWKMARASKSAVVLCLDVGHTMGHAPPGHESPFEQAKRVLLMFVQRQVFAESKDE
TALVLYGSDATSNPLAGADQYQHITVHRNLMIPDFSLLEDVQSRIEPGLQQADFLDALVV
CMDVLQKQTLGKKYEKLHIAVFTDLNSPFSSDQLDIIIANLRQAGITLQFFLPFPLDSDG
EGGGCGDADSGVQADRSRGHPPGKGLTTQQXEGVKMVRKVMTAFDEEFGLDEVFTFSESA
ERLGLFKKLERRPMPWPCQLTIGSNISIRIVGYKAMCEEKVKKAWISVDAKTLQKEDVRK
EVVYCLNDDDETEILKDETIQGFRYGSDIIPFSRIDQDQMKYKTDGKCFSVLGFTKSSQV
LRHYNIGRQTLKVLPPKDDEHAAVALSALIQALEEMDMVAIVRYVYDRRSNPQVGVAFPL
IKEEYQCLVYIQLPFMEDLRQFTFASLSHKRWAASEEQLAAVDSLIDSMGLVQEDGEKTQ
DLFKVSKIPNPHYQRLFQCLQYKAFHPDQPLPPIEAQLTAMLERPQEVSVSCQPALQHLK
SLFTLQDAGKKKEPKIAQKIFNNVEEPDAKRARLDDEEFCITRLAEGRVTSVGSLHPAKD
FRFLISQKSDFREVSSQLKERVWQFLAVKGREYYIKSMDCISAFREEAVKAGKAQLFNTF
IKTLKESVEEKGLYDFWDLLVQDGVSLITQDEAGDSAVTEDEAKRFLAAEERAAEPEAVA
EDGGDVDDLLDMM
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcacaggatgtgttggtggaaaatggcgcgagcgagtaagtccgctgtggttctgtgc
ctggatgtgggtcacacaatgggccacgcgccaccagggcacgagtctccgtttgaacag
gccaagagagttctgttgatgttcgtgcaacgacaggtgttcgctgagagcaaagatgag
actgccttagtgctgtacggcagcgacgcaacctccaaccctctggctggggcagaccaa
taccagcacatcaccgtgcacaggaacctgatgatccccgacttcagtctcctggaggac
gtgcagagcaggatcgagcctggactgcagcaggcagactttctggatgccctggtggtc
tgcatggatgtgcttcagaaacagacactggggaagaaatacgagaagctgcacatcgcg
gtgttcacagacctgaacagccccttcagctccgaccagttggacatcatcatcgccaac
ctgaggcaggccggcatcactctgcagttcttcctcccattcccactggattcggacggt
gaaggaggcggatgcggggacgctgactcgggagtacaggcagatagaagccggggccat
cccccggggaaagggctgaccacgcaacagnaggaaggagtcaagatggtcaggaaggtg
atgacagcctttgatgaggagtttggtctcgatgaggtcttcaccttcagtgagagtgct
gagcgccttggcctgttcaagaagctggagaggagaccgatgccttggccctgtcaactg
accattgggtccaatatctccatcaggattgtgggctacaaggcaatgtgtgaggagaaa
gtgaagaaggcgtggatatctgtcgatgccaagacactacagaaggaggacgtgagaaag
gaggtggtttactgcttaaacgacgatgatgagacagagattctcaaggatgagaccatc
caaggattccgctacggcagtgatataatcccgttctcccgcattgaccaggatcagatg
aaatacaagacggacgggaagtgcttcagtgtgctgggattcaccaagtcctcacaggta
ttgaggcattacaatatcgggcggcagacgctgaaggtcctcccaccaaaagatgatgag
catgcggcggtggcactctcagcactgatccaggctctggaagagatggacatggtggcg
atcgtgcgctacgtgtacgaccggagatcaaacccgcaggtgggcgtggccttccctctc
atcaaggaggaataccagtgcctggtgtatatccagctacccttcatggaggatctcagg
cagttcacgtttgcctccctcagccacaagcgatgggcagcttccgaggagcagttggct
gctgtggattctctgatcgactccatggggctggtgcaggaggacggggagaaaacccag
gatctcttcaaagtcagtaaaatccccaatccacattaccagcgtttgttccagtgtctc
cagtacaaagcctttcacccggaccagccactgccccccattgaggcacagctgacagcc
atgctggagaggccccaggaggtgtctgtctcctgccagccagccctgcaacatctcaaa
tccctcttcactctgcaggatgctggcaagaagaaagagccaaagatcgcacagaaaatc
ttcaataacgtggaggagcccgatgcaaagcgagcacgactggatgacgaggagttctgt
atcactcgactggctgaaggcagagtcacctcagtcggcagtctgcatccagccaaagat
ttccgattcctcatcagccagaagagcgacttcagagaagtgagctcacaactgaaggag
cgtgtgtggcaattcctggctgtgaagggacgagagtattacataaagagcatggactgt
atctcggccttcagggaggaggcagtgaaggccggaaaagctcaactcttcaacaccttc
attaaaactctgaaggagagtgtggaggaaaagggtctgtacgacttctgggatctgctg
gtacaagacggagtttccctcatcacacaggatgaagctggagacagcgcggtgacagag
gatgaggccaagaggttcctggcggcagaggagagagcggcggagccggaggctgtggcc
gaggatgggggagacgtggatgatctgctggatatgatgtag
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