Callorhinchus milii (elephant shark): 103189952
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Entry
103189952 CDS
T03088
Name
(RefSeq) LOW QUALITY PROTEIN: clustered mitochondria protein homolog
KO
K03255
protein TIF31
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cmk03012
]
103189952
Translation factors [BR:
cmk03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
103189952
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_12
CLU_N
TPR_NPHP3
TPR_10
GSKIP_dom
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
103189952
NCBI-ProteinID:
XP_007908722
LinkDB
All DBs
Position
Unknown
AA seq
1494 aa
AA seq
DB search
MVQGGEEKAIASRPGPVTAATTTADSKAERVALNGRKREEIPSVNGQVMKPDGEEVIPDQ
DLLNIKIQVTGSDAFDLQVSPQELVQEIIQVLMDREDTCHRTCFSLQHRGNILDNFSELS
SVKGLGDGSVLKVVEEPYTAREARIHIRHIXDLLKSLDLADAYNGMNCNSLSFLTEVSEG
DAAGESISGNNGKKKRRSVSDQIFDAVDCSPPEYILPGSKDRLLSPLQPPVLDNKSVQCL
KALMLSGWNPPPGNRRMHGDLMYLYVITMEKRHVSLTASTRGFYINQSTMDVFNPKPASP
SLLCHSLVELLSQISPAFKKNFTALQKKRVQCHPLKRIATPYQLYSWTTPHSEHTIDCVR
AEDAFTSRLGYEEHIPGQTRDWNEELQTTRELPREVLTQRLQRERAMFKVNSDFVAAATR
GAMAIIDGNVMAINPGEEVKMQMFIWNSIFFSLGFDVRDHYKDFGGDCAAYVASGHDLKG
VRAFSLEDTSGLYTLGTVVLDYRGYRVTAQSIIPGILEREQEQSVVYGSVDFGKTVMSNH
QYVDLLLKSAKALCVQKHLVLNEHDQPVLLCSSVECKGIVGNDGRFYILDLLRTFPPDLN
FLPVEGEEMPEECRRWGFPRQYRHKLCSFRPELLERFVQHKYTLFTKLVKEKMKESDSMQ
NGQEEGDSETDEKCSALKAACRAVGSVNDVVFDIRFNPNMYSSGVRFHELENEAIVIQKR
LLRDAAAFLVAEQIPSFITDCLRHKVVPADGVTMTDALHRRGINIRYIGTIAQLVSQSEE
RQRLDHIMRLLVSEVITRAATHILTTYLQGVEMSGLSSAVSRFLNCLLSSYPNPVAHLPP
DELVSRRKKSKRKLRSPGAVDTAWSSLAPCELWRHINSEASECFNYTLACDGIDQAVERF
GFQKVSLLREFCIKAGIQILLRDYSFDSRHKPTFTEEDVLNIFPVAKHVSVRATDGERIY
QSAKEKVEKGNLTEGFELLTEALNQFNNVYGAMHPDMCDALHLLARLRYLKGDVSEAVNH
QQKTVIMSERTRGFDHPRTTQEYISLALYSFANSQVCVALKLLYRARYLTLTVSGEDHPA
MAVLDSSIGLVLQAVLECDLALRFLQKALEINLKYFGLQSLQTALSYHLLAQVCASKAEF
RTAMQHEKETYTIYRAQLGESHQQTRVSSEFLKHVTQQAVNLQRTMNEIYQNGSGSNTNT
NLPLVQITPPSIDTMLEQLNTINGVSILPVSDPEAERKFQLEKTAQRIKQLIRAEAEMTQ
RLKAAGASGTSSSTMITQIAALRELANGTKALTENQPSAGGETGDVASSESVTGSVAVNE
AMAGGVAMSEGVVGSESVTGGVAVSEGVAVNEGVAGGVAVSESVAVSEGLAVGMAISKSV
AVSEGVAGGVAISEGVAGGVAVSEGVVGGVAMGEGVAGGVAVCEGVAGGVAISKGVAVSE
GVAGDVAIREGVAVSEGVAGDVAIREGVAGGVAVSEGVAVGVAESKVELGQNAL
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaggggggcgaggagaaagctatcgcctctcgccctggcccagtcacggcagcc
accaccacagcagactcgaaggctgagcgagtcgcattgaatggcaggaaaagggaggag
attccatctgtgaatggccaggtcatgaagcctgatggtgaggaagtaattcctgatcag
gatctactgaacatcaaaatacaggtgacgggaagtgatgcgtttgacttgcaggtgtcc
ccccaggaactggtgcaagagattatccaggtgctgatggacagagaggacacgtgtcat
cgcacctgcttctcgctgcagcacaggggcaacatcctggacaacttctctgagctgagc
agcgtgaaggggctgggggacggatcggtcctcaaagtggtggaagagccttacactgcg
cgagaagctcggattcacatccgccatatcnaggatctgctgaagagtctggatctggct
gatgcctacaatggcatgaactgcaactccctgtccttcctcactgaggtctcagagggt
gatgctgcaggtgaatcaatttctgggaacaatggaaagaagaaaagacgttcagtttcg
gatcagatatttgatgccgttgactgttccccaccagagtatatcctaccgggatccaag
gatcggcttctgtcccctcttcagccaccagtcctggataacaagtctgtgcagtgcctg
aaagctctgatgctaagtggttggaaccctccccctgggaaccgccggatgcatggggac
ctgatgtacttgtacgtcatcaccatggagaagcggcatgtcagcttgaccgcctccact
cgtggcttctacatcaaccaatccacgatggacgtgtttaacccgaagccggccagcccg
agcctgctgtgccactcgctggtggagctgctcagccagatcagccccgccttcaaaaag
aacttcacagctttgcagaagaaaagagtgcagtgccacccgctgaagcggatcgccacc
ccctaccagctgtacagctggaccacaccccactccgagcacaccatcgactgtgtgcgg
gcagaggatgccttcacctcccggctcggctatgaggagcacattcccggccagacgcgg
gactggaatgaggagttacagacgacgcgagagttgccccgtgaggttctgacccagcgg
ctgcagagggaacgcgccatgtttaaggtgaacagtgactttgttgctgccgccacgcgg
ggagcgatggccatcatcgatgggaacgtcatggccatcaacccgggcgaggaggtcaag
atgcagatgttcatctggaacagcatcttcttcagtctgggctttgacgtgcgtgaccac
tacaaggacttcggcggcgattgtgccgcgtacgtagcctcgggccatgatctgaagggg
gtgcgagcgttcagcttggaggacacctcgggtctgtacacgctgggcaccgtggtgctg
gattaccggggataccgggtcacggcacagtccatcatcccgggaattctggaacgggag
caggagcaaagtgtggtgtatggatccgtagacttcgggaagacagtgatgtccaaccat
cagtacgtggacttgctgttgaagagcgccaaggcgctgtgtgtccagaaacacctggtg
ctgaacgaacacgaccagcccgtgctcctctgctcctcggtcgagtgtaaagggattgtg
ggaaacgacggccgcttctacatcctggacttgctccgcactttcccgcctgacctgaac
ttcctgcccgtggagggcgaggagatgccggaggagtgccggagatggggcttccccagg
cagtaccgacacaagctgtgcagcttccggccggagctgctcgagagattcgtccaacac
aaatacacactttttacgaaactggtgaaggagaaaatgaaggaaagtgattcgatgcag
aacggccaggaggagggggacagcgagactgatgagaaatgcagtgcactgaaggcagcg
tgtcgtgctgtgggctccgtcaatgacgttgtctttgacattcgcttcaaccccaacatg
tattcctcaggtgtgagattccacgagttggagaacgaggcgattgtgatccagaagcgt
ttgctcagagacgctgcagccttcctggtggcagagcagatccccagcttcatcacagac
tgcctgaggcacaaggttgtgccggccgacggagtgaccatgacggacgccttacaccgg
cgcgggatcaatatccgatacatcggcaccatagcgcagctggtcagtcaatcagaggag
aggcaacgactggatcacattatgaggctgctggtcagtgaggtcatcacccgggctgcc
actcacatcctcaccacctacctccagggcgtggagatgtcagggctgtcatctgcggtc
agtcgcttcctgaactgtctgctcagctcctaccccaatcccgtcgcccacttgcccccc
gatgaacttgtgtctcgcaggaaaaagagcaagcggaagctgcggagccctggggcggtt
gacacagcttggagcagcctggcgccctgtgagctgtggaggcacataaacagcgaggcc
agtgagtgcttcaactacacactggcatgtgatgggatcgatcaggctgttgagcggttc
ggattccagaaggtgtctcttctccgggaattctgtattaaggctggaatccagattctg
ctgcgagactacagctttgacagccgccacaagccaaccttcacagaggaagacgtcctt
aacatcttccccgtggccaagcacgtcagcgtgagggccacggatggcgagcgcatttat
cagagcgcaaaagagaaggtggagaaaggcaatctcacagaaggctttgagctgctgact
gaagctttgaatcagtttaacaatgtgtacggagccatgcacccggacatgtgtgatgct
ctacacctactcgcccggctccgctacctgaagggagacgtttccgaggctgtgaaccac
caacagaaaactgtgatcatgagcgagcgaacccggggctttgaccatccaaggaccacc
caggaatacatcagcctggctctgtactccttcgccaacagccaggtgtgtgtggctctc
aagctgctgtaccgtgctcgctacctgacgctcaccgtgagtggagaggaccaccctgcc
atggcagtgctggatagcagcatcgggctggtactgcaggctgtgctggagtgtgatctc
gctcttcggttcctgcagaaagctctcgagataaacctcaagtatttcgggctccagtcg
ctgcagactgcgctcagctaccacctcctggctcaggtgtgcgccagcaaagccgagttc
cgcacagctatgcagcacgagaaggagacatacaccatctaccgagcccagctcggtgag
agtcaccagcagaccagagtgagctccgagttcctgaaacacgtcacccagcaagcagtg
aacctacagagaaccatgaatgagatctaccagaatggttccggctccaacaccaacacc
aacctcccgctggtgcagatcacccccccgagtattgacacaatgctggagcagctaaac
accatcaatggagtttccatccttcccgtcagtgatcctgaagcagaaagaaaattccag
ttggagaaaacggcgcagaggataaaacagctgattcgggccgaggccgagatgacccag
cgactgaaggctgcgggtgctagtgggacgagcagctcgacaatgatcacgcagattgca
gctctgagggagcttgctaatggcaccaaagccctcactgaaaaccagccttcagctggc
ggagagaccggggacgtagccagtagtgagagtgtgactgggagcgtggccgtgaatgag
gctatggctggaggcgtggccatgagtgagggtgtggttgggagtgagagtgtgactgga
ggcgtggctgtgagtgaaggtgtggctgtgaatgagggtgtggctggaggtgtggccgtg
agtgagagtgtggctgtgagtgagggtttggctgtaggcatggccataagtaagagtgtg
gctgtgagtgagggtgtggctggtggtgtggccataagtgagggtgtggctggaggtgtg
gctgtgagtgagggtgtggttggaggtgtggccatgggtgagggtgtggctggaggtgtg
gctgtgtgtgagggtgtggctggaggcgtggccataagtaagggtgtggctgtgagtgag
ggtgtggctggagatgtggccatacgtgagggtgtggctgtgagtgagggtgtggctgga
gatgtggccatacgtgagggtgtggctggaggtgtggcagtgagtgagggtgtggctgta
ggtgtggctgagagcaaagttgagttgggacagaatgctctgtaa
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