Callorhinchus milii (elephant shark): 103190032
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Entry
103190032 CDS
T03088
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03082
ATP-dependent chromatin remodeling
cmk03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103190032
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103190032
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmk01009
]
103190032
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmk03021
]
103190032
03036 Chromosome and associated proteins [BR:
cmk03036
]
103190032
Protein phosphatases and associated proteins [BR:
cmk01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103190032
Transcription machinery [BR:
cmk03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103190032
SWI/SNF complex
103190032
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103190032
PBAF complex
103190032
SWI/SNF complex
103190032
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
103190032
NCBI-ProteinID:
XP_007908828
UniProt:
V9KYG3
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MRAGLPGGKMAASKTFGQKPIKFQLEEAGEWYMIGSEVGNYLRMFRGSLYKRYPSLCRRL
ATVEERKKIVASSHDHGYTTLATSVTLLKAAEVEEILEGNDEKYKAVSISTEPPAYLREQ
KAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMSRDKKRTFPLCFDDHDPAVIHENASQP
EVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLTFVPAIASAIRQ
QIDSYPMDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGL
GGEFVTTIAYSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEK
KIRDQDRNTRRMRRLANTAPAW
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgctgggctgcctggcgggaagatggcggcgagtaaaacgttcggacaaaaacca
ataaagttccagttggaggaggcgggagagtggtacatgatcggctctgaggttggaaac
tatctgcgcatgttcaggggctctctgtacaagagatatccatcactatgtagacggctt
gccacagttgaagaaaggaagaaaatcgtagcatcatcacatgatcatggttataccact
ttagctaccagcgtgacacttcttaaagctgcggaggtggaggagattctcgagggaaat
gatgaaaagtacaaggccgtttccatcagcactgagccaccagcgtacctcagagaacaa
aaagctaagcggaacagtcagtgggtgccaacgctaccaaacagctcccatcatctagat
gcagtaccatgttccacaaccatcaatagaaaccgtatgagcagagacaaaaaaagaacc
tttcctctatgctttgatgaccatgacccagctgtgatccatgagaatgcctcacagcct
gaagtgctggttcctattcgactcgacatggaaatagatggccagaaattgagagatgcc
tttacatggaacatgaatgaaaagttaatgaccccggagatgtttgcagagattttgtgc
gatgacctggatttgaatcccttaacctttgtccctgccattgcctcggcgattcgccaa
cagatagactcctaccctatggacagtattctagaggatcagtctgatcagagagttatc
attaagctaaatatccacgttggtaacatctccctggttgaccagtttgagtgggacatg
tctgagaaagagaattccccagagaagtttgccctgaagctgtgctctgagttgggtctc
ggaggagagtttgtcaccacaattgcttacagcatcagggggcaactgagctggcatcag
aggacgtacgcattcagtgagaacccactgcctacagtggaaattgcaattcgcaacaca
ggagatgctgatcagtggtgtccccttctggagacactaaccgatgccgagatggagaag
aagattcgggatcaggataggaataccaggcgtatgagacgtctcgcaaacactgcacca
gcctggtaa
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