Callorhinchus milii (elephant shark): 103190239
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Entry
103190239 CDS
T03088
Name
(RefSeq) serine/arginine-rich splicing factor 5
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03040
Spliceosome
cmk05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103190239
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103190239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmk03041
]
103190239
Spliceosome [BR:
cmk03041
]
Common components
Common spliceosomal components
SR proteins
103190239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
SET_assoc
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
103190239
NCBI-ProteinID:
XP_007909131
UniProt:
V9L593
LinkDB
All DBs
Position
Unknown
AA seq
277 aa
AA seq
DB search
MNGCRVFIGRLSPQVRERDVEKFFKGYGRIREIDLKRGFGFVEFDDPRDADDAVYELNGK
ELFRERITVELAKAPPRRGGRFGSRFNYQRSRTERSSGQRYGPPVRTEYRLIVKNLSSRV
SWQDLKDIMRQAGEVTFTDAHRTHNNEGIVEFASYSDLKSAIEKLDGKEINGRRIQLIEE
SRHRRSWTRSRSRTSTRSRSNKGSRSVSRSASRSRSRSRSPSRSPLRVAQRTRAESRSPQ
GERRRQPPPSRSPSDSPRKSARSWSGSREQSPVNSAE
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaacggttgccgagtttttatcggacgcctgagccctcaggtgagggagcgcgatgtg
gaaaagttcttcaaagggtacgggcggattcgtgagatcgatctcaagagaggcttcggg
tttgtggaattcgatgatccccgtgacgcagatgatgccgtttacgaactgaatggtaaa
gagctgttccgagagaggatcacggtggagctggctaaggcccctcctcggagaggcggc
agatttggcagcaggttcaactaccagcgatccaggaccgagcgcagcagcggacagaga
tacgggccgcccgtgcgtacagagtatcgcctgatcgtcaagaacctctcttcccgtgtc
agttggcaggatctgaaggacatcatgcgccaggctggtgaagtgaccttcactgatgct
cacagaactcacaataatgaaggtattgtggagtttgcttcctacagcgacttgaaaagt
gccattgagaagctggatggcaaagagatcaatggaaggcggattcagctgattgaggag
tctagacatcgcagatcctggaccagatcccgctccagaacctccaccagatcccggagt
aacaagggctcccggagtgtgtcccggtctgccagccggtctcggagccgctcgcgctcc
cccagcaggtccccgctccgtgtcgcccaacgcacccgagccgagtcccgctccccccag
ggagagcgacgacggcagccgcccccatcccgatccccgtccgactccccccgcaagtca
gcccgctcctggtcaggctcccgggaacagtcgcccgtcaacagcgcagagtaa
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