Callorhinchus milii (elephant shark): 103190444
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Entry
103190444 CDS
T03088
Name
(RefSeq) pseudouridylate synthase 7 homolog-like protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmk03016
]
103190444
Enzymes [BR:
cmk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
103190444
Transfer RNA biogenesis [BR:
cmk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103190444
Prokaryotic type
103190444
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
103190444
NCBI-ProteinID:
XP_007909423
UniProt:
A0A4W3J9C6
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MEEELRLSDGSVSAPSTCWLNPHTGFFGTIKNSPSDFVVTEISLCGCMVSDVHSESCRGA
EETDQEPCVPFRKRLKKAEEIWDNVGSVESSSGCLSLGGSEGLEDSCSEATGCNSPGSVF
RSVKLAPGSALDSFLDVAVADSLERFARLVEAWITQEEGDGEGTVFSLGVFPDKSHRADI
HRAVRQKYPFLKTLTIGAEILVKPDGNYSGLSRLLSRREAGDFLRFLDSRDKNSTFTFSP
DGSKDHRKAVHHFVSKRFGKMVEAKSFPERGGDGGHQRAAITVRFRERFAFGKKRSADDC
PEAPATYTAFTLRKENTETLDAIGILAAELGVVPSDFSYAGIKDKKAVSFQTVVVKNVTP
RRLDVKKARLQSKGLKVYNIRLAPQHLRLGQLWGNHFNIVVRGVRKHQGDDPEASLSDRV
LEAIHNVKEKGFVNFYGLQRFGLGQNVQADQIGLALLKEHLVQAVHLFFTPEEGNNPVNK
AKRHFLLTGDVKATLALMPDYKTRERLMLRALNRYGTDQEGCAQAWLSIPHSMRLLYIHS
YCSKVWNQAVSYRVKTYGLRPVEGDLVIAESAEASSSQNDRVHVVTAEDQKANLYSIDQI
VLPMPGNSTQYPSNQLDQWYQETLARDGLKTCKFRLPALHLNIPGCYRRLLAHPQHLAWQ
WLGDGDVAPVSRDCHPVDECGAVSDSLSLTFSLRPSCYATECLREVMKSSV
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaattgcggctctcggatggcagtgtatctgctccctccacgtgctggctc
aaccctcacaccggattctttggcaccattaagaactccccgagcgactttgtggtgacg
gagatcagcttgtgcgggtgcatggtaagcgatgttcactctgagagctgcagaggcgct
gaggaaactgaccaagagccctgtgtgccattccgcaaaagactaaagaaggcagaagaa
atttgggacaatgttgggtcagtggagagctcttctgggtgtttaagtctcggaggttcc
gaaggtctcgaagacagttgcagtgaggctactggttgtaattcaccaggttctgtcttt
cggtcagtgaaactggctccgggcagtgccttggattccttcctggacgtggctgtggct
gactcgctggagagatttgcccgtttagttgaagcatggatcacacaggaggagggagat
ggggaagggacggtcttctccctcggagtatttcctgacaaaagccaccgagcagacatc
caccgtgccgtccgtcaaaaataccccttcctcaagacgctgacgattggggccgaaatc
ctagtcaagccggacgggaactactccgggctcagtcgcctgctctcccggcgggaagct
ggtgactttctccgcttcctggactccagggataaaaattccacatttaccttcagccca
gatggcagcaaggaccacaggaaagccgtccaccattttgtcagcaagcgctttgggaaa
atggtggaagcaaaaagctttccagagcgcggaggcgacggtggccaccagagggcagcg
attactgttcgattccgggagagatttgctttcggtaagaaacgcagtgcagatgattgt
ccggaggcaccagcgacctacacagccttcacacttcgtaaggaaaacacggaaaccctg
gacgctatcggtatcctggcggcagaacttggtgtcgtgccatcagatttcagctatgcc
ggcattaaagataagaaggcggtgtctttccagactgtggtggtgaagaacgtaacaccc
aggaggttagatgtgaagaaggcgaggctacagagcaaaggtttgaaggtgtataacatc
cgcctggcccctcagcacctgcgccttggccaactctggggaaaccatttcaatattgtg
gtgagaggtgtccgcaagcaccagggggatgatcctgaggcaagtctctctgatcgggtg
ctggaagctattcacaacgtcaaggaaaagggctttgtgaatttctatggactgcagcga
tttggattggggcagaatgttcaggcagatcaaattggtttggctctacttaaggaacat
ttggtccaggctgtccatttattcttcacaccagaagaaggaaataatcctgtcaataag
gcgaagagacattttctcctaactggggatgtcaaagcgacactggccttgatgccggac
tacaagaccagagagcggctgatgcttcgtgctttgaatcgctatggcacagatcaggag
ggctgtgcccaggcttggctcagtattccacactccatgaggctcctttatatccactcc
tactgcagcaaggtatggaaccaggcagtgtcttaccgggttaagacatatggcttgaga
cctgtggagggcgacttggtgatcgcagagagtgctgaggcttcgtcatctcagaacgat
cgggtacatgttgtgacagcagaagatcagaaggcaaatctttattccattgaccaaatt
gttcttccaatgcccggtaacagcacccaatatccatccaaccagcttgaccaatggtac
caggaaaccttggccagggatggactgaagacatgcaagtttagacttcctgctctacat
ctgaacatccctggttgttatcgtcggctgctcgcccaccctcagcaccttgcctggcag
tggctgggagacggagatgtggctccagtgagcagagactgtcatcctgtcgatgaatgc
ggtgctgtgagcgactcgctctccctgaccttcagcctcagaccatcgtgctacgcaacc
gagtgtctccgagaagtgatgaagtccagcgtgtga
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