KEGG   Callorhinchus milii (elephant shark): 103190453
Entry
103190453         CDS       T03088                                 
Symbol
col9a3
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk04510  Focal adhesion
cmk04512  ECM-receptor interaction
cmk04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103190453 (col9a3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103190453 (col9a3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103190453 (col9a3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:cmk00535]
    103190453 (col9a3)
Proteoglycans [BR:cmk00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   103190453 (col9a3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 103190453
NCBI-ProteinID: XP_007909439
LinkDB
Position
Unknown
AA seq 495 aa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NT seq 1488 nt   +upstreamnt  +downstreamnt
atgcctggattcaagggacacacgggtcacaagggcgatcgaggagaattggggaagatc
ggagctccgggtgatgaaggattgcctggctcccctggagtgggcggtgccggaggactg
cagggtccccgcgggctgagaggtcctctgggtcaggcggggccagtgggaaaccgagga
gtcattggattccgggggccgatgggtctcccgggggccacgggacaagttggggatgaa
gggccaaaaggctatgatggattgcagggaccgaagggaaaccccggtaagatcggtccc
agaggaattccaggtgtggccgggacgaagggtgagccggggattcccggccgcgacggc
agagatggaacctcaggcatcgacggtgaaaagggcgaccctgggcagcctggtggtccc
ggagagaagggtcctgtcgggcaaccgggacttcccgggaagtcaggaaccaaaggctcc
gcaggtgaacagggaagccaaggaccgatgggggcaacaggaccacagggagctccgggc
agtgcaggaaacatgggcgactctggggagatgggtgaacgtggcccgagaggcgaggct
ggagaaatggggccgcaaggaggccgcggtgtcaggggtcggagaggtttccagggtcac
aaaggtgacattggggagccaggcgtgcccggacccaccggcctccgtgggggctttgga
gagcgaggtccaatgggagcttctggacccaaaggtacccagggattggccggcgctgat
ggacttcctggtgaaaaaggcgaaatgggtcagacaggtccacaggggcagaagggagag
ccgggccctcgcgggaatgtcggagtgaagggattgttcggaccgtcgggagtcgctggt
gtggagggggtcccggggccccccgggctgatgggggttcacggagacagcggtgtcccc
ggggtcactgggcggcgcggacctcccggtaaactagcgagtgagcagcggattagggag
ctttgtcgcgacctgattaacgatcaaatgaccttattggccaataacctccggcggccg
ctgtctccgggcatgactggccggcgtgggcctccaggaccctcgggtgtgcctggcact
aaaggtaacgctgggcacccgggcaagcgcggccccccgggactgtacggaccctccgga
gagctgggtgatacgggcgctcgcggtgacattggtgaaaaaggagacaggggcaggatc
ggcaaagccatcaacggcttagttgggcctcaaggacctacaggtcccacaggaatgatg
gggatcagcaagaatggtcgcgatggggctttgggagacccaggccttcccggagagcca
ggcaaagcaggatcacagggagcgatgggatccccaggaatctgtgacacttcggcctgc
cagggagccgtcgcagctggaaaatcctctcatcccaaaaaatcatga

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