Callorhinchus milii (elephant shark): 103190453
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Entry
103190453 CDS
T03088
Symbol
col9a3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04510
Focal adhesion
cmk04512
ECM-receptor interaction
cmk04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103190453 (col9a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103190453 (col9a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103190453 (col9a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cmk00535
]
103190453 (col9a3)
Proteoglycans [BR:
cmk00535
]
Extracellular matrix (ECM) proteoglycans
Others
103190453 (col9a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
103190453
NCBI-ProteinID:
XP_007909439
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search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NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcctggattcaagggacacacgggtcacaagggcgatcgaggagaattggggaagatc
ggagctccgggtgatgaaggattgcctggctcccctggagtgggcggtgccggaggactg
cagggtccccgcgggctgagaggtcctctgggtcaggcggggccagtgggaaaccgagga
gtcattggattccgggggccgatgggtctcccgggggccacgggacaagttggggatgaa
gggccaaaaggctatgatggattgcagggaccgaagggaaaccccggtaagatcggtccc
agaggaattccaggtgtggccgggacgaagggtgagccggggattcccggccgcgacggc
agagatggaacctcaggcatcgacggtgaaaagggcgaccctgggcagcctggtggtccc
ggagagaagggtcctgtcgggcaaccgggacttcccgggaagtcaggaaccaaaggctcc
gcaggtgaacagggaagccaaggaccgatgggggcaacaggaccacagggagctccgggc
agtgcaggaaacatgggcgactctggggagatgggtgaacgtggcccgagaggcgaggct
ggagaaatggggccgcaaggaggccgcggtgtcaggggtcggagaggtttccagggtcac
aaaggtgacattggggagccaggcgtgcccggacccaccggcctccgtgggggctttgga
gagcgaggtccaatgggagcttctggacccaaaggtacccagggattggccggcgctgat
ggacttcctggtgaaaaaggcgaaatgggtcagacaggtccacaggggcagaagggagag
ccgggccctcgcgggaatgtcggagtgaagggattgttcggaccgtcgggagtcgctggt
gtggagggggtcccggggccccccgggctgatgggggttcacggagacagcggtgtcccc
ggggtcactgggcggcgcggacctcccggtaaactagcgagtgagcagcggattagggag
ctttgtcgcgacctgattaacgatcaaatgaccttattggccaataacctccggcggccg
ctgtctccgggcatgactggccggcgtgggcctccaggaccctcgggtgtgcctggcact
aaaggtaacgctgggcacccgggcaagcgcggccccccgggactgtacggaccctccgga
gagctgggtgatacgggcgctcgcggtgacattggtgaaaaaggagacaggggcaggatc
ggcaaagccatcaacggcttagttgggcctcaaggacctacaggtcccacaggaatgatg
gggatcagcaagaatggtcgcgatggggctttgggagacccaggccttcccggagagcca
ggcaaagcaggatcacagggagcgatgggatccccaggaatctgtgacacttcggcctgc
cagggagccgtcgcagctggaaaatcctctcatcccaaaaaatcatga
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