Callorhinchus milii (elephant shark): 103190594
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Entry
103190594 CDS
T03088
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04140
Autophagy - animal
cmk04148
Efferocytosis
cmk05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103190594 (vps11)
04148 Efferocytosis
103190594 (vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103190594 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmk04131
]
103190594 (vps11)
Membrane trafficking [BR:
cmk04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
103190594 (vps11)
Hops complex
103190594 (vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
zf-C3HC4_2
Clathrin
zf-RING_2
zf-rbx1
zf-C3HC4
TPR_GEMI5
zf-C3H2C3
TSGP1
zf-RING_5
WD40_Prp19
zf-RING_11
Paralemmin
NUDE_C
zf-ANAPC11
Beta-prop_EML_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
103190594
NCBI-ProteinID:
XP_007909626
UniProt:
A0A4W3JE14
LinkDB
All DBs
Position
Unknown
AA seq
933 aa
AA seq
DB search
MAALLQWRRFVFFDKESVKETGDGGGGGGTDFRFPGDSAISVCASGRGSLVLGDIEGNIW
FLTRTLLVNSFQAYKLRVTHLYQLKQHSILVSVGADELGINPLVKVWNLDKRDSSGNPLC
TRIFSAIPGNKPTEVTCLTVHENLNYMAIGFTDGSVVLKKGDITRDRHSKTDVLPEETYP
ITGLGFQQSSKLTHLFVVTTHNVKSYNLSQKDFPATELNSQGCSLRCSALCDPSQDNQFM
VAGDECVYLYQPEERGPCFAFNGRKQVVHWYRGYLVIVSKEKKPPKTDFSGTNGQAVEKQ
LLTIYDLDNKFIAYSAVFDDIIDVLAEWGSLYVLTGNRTLSVLQEKDTQSKLEMLFKKNL
FVMAISLAKSQHLDNDGLAEIFRQYGDHLYIKGDHDGAIQQYIRTIGKLEPSYVIRKFLD
AQRIHNLTAYLQALHCQLLASEDHTTLLLNCYTKLKDSSKLEEFIKMSEREVHFDVETAI
RVLRQAGYYQHALYLAERHLHHQWYLKIQLEDIKNYQEALHYIGKLPFEQAESNMKKYGK
TLMHHAPDKTTELLKVLCTGYRPSKDPQPDTESQHEGKANSEEFIPIFANNPRELKMFLE
HMMVEQPDSPQAVYDTLLELRLQDWAHEDETQAKWQLQEEAMALLRGGLFKDVLDKALVL
CQMHNFKDGVLYLYEQGRLYQQIMHYHMQNEAFAKVLDTCEQYGEQEPCLWEQALGYFAR
KEEDCKEYISRVLQHIDTNNLMPPLLVVQTLAHNSTATLSVIKDYLISKLQQESEQIRED
EQRVQQYREETRRLRHEIQELKTSAKIFQKTKCSICSSALELPSVHFLCSHSFHQHCFES
YAEHDSECPTCMPENRKVTDMIRAQEQKRDLHDTFQHQLKYSKDGFSVVADYFGRGVFNK
LTLITEPPTGRGATVSIDTGLQRDLLIHTKRHA
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctgcagtggagacgctttgttttctttgacaaggagtcggtgaaggag
acgggcgatggcggcggcggcggcggcacggatttccgcttccccggggactccgccatc
agcgtgtgcgccagcggccggggcagcctggtgctgggggatatcgaaggtaatatctgg
ttcctgacccgcactctgctggtcaactcgttccaggcctacaaactgcgggtgacgcac
ctgtatcagctcaaacagcacagcatcctggtgtcagtgggcgcagacgagctaggcatc
aacccgctggtgaaggtgtggaacctggacaaacgggacagcagcgggaatccactctgc
acccggatattttccgcaattccaggaaacaaacccacggaagtgacatgtttgactgtg
cacgaaaatctcaactacatggccataggcttcactgacggcagtgtggtgctcaagaaa
ggcgatatcactcgggacagacacagtaagacggatgtgctgcccgaggagacctacccc
atcaccggccttggcttccagcaatccagcaaactcacccatctcttcgtggtgaccaca
cataatgtcaagtcatataacctgtcgcagaaggatttcccagccacggaactgaacagc
cagggttgcagcctgcgctgctcagccctgtgcgatccctcgcaggacaaccaattcatg
gtggcgggggacgagtgcgtgtacctgtaccagcccgaagagcgaggaccctgcttcgct
ttcaacggccggaagcaagttgtgcactggtatcgtggctacctggtcatcgtgtccaag
gagaagaagccgcccaagacggatttctctggcaccaatggccaggctgtggagaagcag
ctgctgaccatctacgatctggacaataaattcatcgcctacagtgcagtgtttgatgac
atcattgatgtgctggcagagtgggggtccctctacgtgctgaccggcaacagaacactc
agtgtcctccaggagaaggatacccagagcaagctggagatgctgtttaagaagaacctg
tttgtgatggcgatcagcctggcaaagagccagcacttagacaacgatggactggccgag
atattccgtcaatatggtgaccatctgtacatcaagggagatcacgacggtgcaatacag
cagtacatccgcaccattgggaagctggaaccctcatatgtgatccggaagtttctggac
gcccagcgcatccacaacctgacggcgtacctgcaggcgctgcactgccagttgctggcc
agcgaggaccacaccaccctcctgctcaactgctacaccaaactaaaagacagctccaag
ctggaggagtttatcaagatgagcgagcgtgaggtgcactttgacgtggagacggccatc
agggtgctgcgccaggcaggttactaccagcatgcgctctacctagcagagagacatcta
catcatcagtggtacctgaaaatacagctggaggacatcaagaattaccaggaagctctg
cactacatcgggaagctgccctttgagcaggccgagagcaacatgaagaaatacgggaaa
accctgatgcaccacgcgccagacaagaccaccgagctgctgaaggtcctgtgcaccggt
tatcgacccagcaaagaccctcaacctgacacagagagccaacacgaggggaaggctaat
tccgaggagtttattccgatcttcgccaacaaccctcgggagctgaagatgttcctggag
cacatgatggtggagcagcctgactccccccaggctgtgtacgacaccctgctcgagctc
cgcctccaggattgggctcacgaggacgagacacaggccaagtggcagctgcaggaggaa
gccatggcactgctgagaggtgggctgtttaaggacgtgttggacaaggccctggtgctg
tgtcagatgcacaacttcaaggacggagtgctgtacctgtacgagcaggggcgtctgtac
cagcagatcatgcactatcacatgcagaacgaggccttcgccaaagtgctggacacatgt
gagcagtacggggagcaggagccctgcttgtgggagcaggcgctcggatactttgcccgt
aaggaggaagattgtaaagaatatatcagccgcgtgctgcaacacatcgacaccaacaac
ctcatgcccccgctgctggtggtccagacgctcgctcacaactccacggccacgctctcc
gtcatcaaggattacctgatcagcaaactgcagcaggagagtgagcaaatccgggaggac
gagcagcgagtgcagcaataccgtgaggagacacgcagactgcgccatgagatccaggag
ctgaaaaccagcgccaagatcttccagaaaaccaagtgcagcatctgcagcagtgccttg
gagctgccgtctgtgcactttctgtgctcacactccttccaccagcactgcttcgagagc
tacgccgagcacgactctgaatgtcccacctgcatgccggagaaccgcaaggtcactgac
atgatccgggcccaggagcagaagcgagaccttcacgacactttccagcaccagctgaaa
tactcgaaggatggattttccgtggtggcggattactttggtcgtggggtctttaacaag
ctgactctgatcacggagccccccacggggaggggagcgacagtcagcatcgacaccggg
ctccagcgtgacctcctcatacacactaagaggcacgcctag
DBGET
integrated database retrieval system
