Callorhinchus milii (elephant shark): 103190613
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Entry
103190613 CDS
T03088
Name
(RefSeq) LOW QUALITY PROTEIN: alpha-actinin-1
KO
K05699
actinin alpha 1/4
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04510
Focal adhesion
cmk04517
IgSF CAM signaling
cmk04518
Integrin signaling
cmk04519
Cadherin signaling
cmk04520
Adherens junction
cmk04530
Tight junction
cmk04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
103190613
04518 Integrin signaling
103190613
04519 Cadherin signaling
103190613
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103190613
04520 Adherens junction
103190613
04530 Tight junction
103190613
09142 Cell motility
04810 Regulation of actin cytoskeleton
103190613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmk04131
]
103190613
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cmk04812
]
103190613
04147 Exosome [BR:
cmk04147
]
103190613
Membrane trafficking [BR:
cmk04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
103190613
Cytoskeleton proteins [BR:
cmk04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
103190613
Exosome [BR:
cmk04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103190613
Exosomal proteins of colorectal cancer cells
103190613
Exosomal proteins of bladder cancer cells
103190613
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
XisI
EF-hand_5
Ig_C19orf38
Motif
Other DBs
NCBI-GeneID:
103190613
NCBI-ProteinID:
XP_042201346
LinkDB
All DBs
Position
Unknown
AA seq
901 aa
AA seq
DB search
MVDYHAANAPQSVPQANHGEYMHPEDDWDRDLLLDPAWERQQRKTFTAWCNSHLRKAGTQ
IEVIEEDFRDGLKLMLLLEVISGERLPRPERGKMRVHKINNVNKALDFIASKGVKLVSIG
AEEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFHI
SWKDGLAFNXLIHRHRPELIDYDKLRKDDPLTNLNNAFEVAEKYLDIPKMLDAEDIVGTA
RPDEKAIMTYVSCFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYEKLASDLLEWIR
QTKPWLENREPEKTMQAMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNRP
AFMPSEGKMVSDINNAWQGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKATIHEEWTK
GKEAMLTQKDYETATLADIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNDLDYYDSPN
VNARCQTICDHWDTLGALTQNRREALERTEKLQETIDQLYLEYAKRAAPFNNWMEGAMED
LQDMFIVHTTEEIQGLIAAHEQFKATLPDADKEREAILGIHNEMIKIAQSYNIKLSGVNP
YTTITPQSINDKWGKVQQLVPARDQALQVEFNKQQSNEHLRQQFASQANVVGPWIQTKMQ
EIGRISIEMHGTLEDQLNQLKQYENSIINYKANIEKLEQDHQLIQEALIFDNKHTNYTME
HIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQLNEFRASFNHFDKDLSGKLGPEEF
KACLISLGYDVGNDQQGEAEFARIMGVVDPNNTGEVSFQAFIDFMSHETTDTDTAEQVMA
SFKILAGDKNYITADELRRELPPDQAEYCIARMAPYAGPDAVPGALDYMSFSTALYGESD
L
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggtggactatcacgcggccaacgcgccgcagtcggtgcctcaggccaaccacggcgag
tacatgcaccccgaggacgactgggaccgcgacctgttactggaccccgcctgggagcgg
cagcagcgcaagacatttacagcatggtgcaactcacacttgaggaaggcagggacacaa
attgaagttattgaagaggatttcagagatggactcaaactcatgctgttactggaggtg
atttcaggagaacgactacccagacctgaacgaggaaagatgagggtgcataaaataaac
aatgtcaacaaagcattagattttattgcaagcaaaggagtgaagctggtttcaattgga
gcagaagaaatcgtcgatgggaatgcaaagatgactcttgggatgatctggactatcatc
ctccgctttgccattcaagatatatctgttgaagaaacttctgccaaggagggacttctg
ctgtggtgccagaggaagacagcgccatacaaaaatgtcaatgtgcagaacttccacatc
agctggaaagatggtctggcattcaacngcctcatccacagacatcgaccagaactcatc
gactacgacaagctgagaaaggacgacccactcacaaacctgaataatgcctttgaagtg
gctgagaaatacctggatatccccaagatgttggatgcagaagacattgtcggcactgcc
cgtcctgatgagaaagcaattatgacctatgtgtcgtgtttctaccatgccttttcgggc
gcccagaaggctgaaaccgctgccaataggatctgtaaagtcctggcagtgaatcaggag
aatgaacacctgatggaagactatgagaagctagccagtgacctgctggagtggatccgt
caaaccaagccctggctggagaaccgggagcccgagaagaccatgcaggccatgcagcag
aaactggaagacttccgcgattaccgccgggtgcacaagcctcccaaagtccaggagaag
tgtcagctcgagatcaacttcaacaccctgcagaccaaactgcggctcagcaaccggccc
gcgttcatgccatcggaaggcaaaatggtctccgacatcaacaatgcgtggcaaggcttg
gagcaggccgagaagggctacgaggagtggctgctcaacgagataaggagactggaaaga
ctggaccacttggcagagaaattcaggcagaaggccaccatacacgaggagtggaccaaa
ggtaaagaggccatgttgacgcagaaagactacgagacggccactctggctgacatcaag
gccttgctgaagaaacatgaggcgtttgagagcgacctggcagcacaccaagaccgggtg
gagcagatcgctgccattgcacaagaactcaacgatctggattactacgactcccccaac
gtcaatgcgcgctgccagaccatttgcgaccactgggacactctgggcgctctaacacag
aacaggagggaagcgctggagaggaccgaaaagctgcaggagacgatcgatcagctgtac
ctggagtacgccaaaagggccgcgccattcaacaactggatggagggagccatggaggac
ctgcaggacatgttcatcgtccacaccactgaggaaatccaggggctcattgcagcccat
gagcagttcaaagccaccttgcctgacgctgacaaggagcgagaggcaatactgggcatc
cacaacgagatgataaaaatcgcccagtcctacaacatcaagctgtccggtgtgaacccc
tacacaaccatcactccccagagcatcaacgataagtggggcaaggttcagcagctggtg
cctgcgcgagaccaggccttgcaagtcgagtttaacaagcagcagtcgaatgaacacctg
cggcagcagttcgccagccaggccaacgttgttgggccctggattcagaccaagatgcag
gagatcggtcgtatctcaatcgagatgcacggcacactggaggatcagctgaaccagctg
aagcaatacgagaacagcatcatcaactacaaggccaacattgagaaactggagcaggac
catcagctcatccaggaggccctcatcttcgacaataagcacaccaactacaccatggag
cacatccgagtcggctgggaacagctgcttacgaccattgctcggaccattaacgaagtg
gagaaccaaatcctcacccgcgatgccaagggcatcagccaggaacaactcaacgagttt
cgagcatctttcaatcactttgacaaggacctcagtggcaaactgggacccgaggagttt
aaagcctgccttatcagcttgggttatgatgtgggaaatgaccaacagggcgaagcggag
tttgcccggatcatgggtgtcgtcgaccccaacaacacgggcgaagtctcgttccaggcc
ttcatcgacttcatgtcacacgagacgacagacacggacacggctgagcaagtcatggcc
tccttcaagatcctggcgggagacaagaactacatcaccgcagacgagttgcggagagag
ctgcctcctgatcaggcggagtactgcattgcccggatggcaccctacgcgggcccagac
gctgtgccaggagctctcgattacatgtccttctccacagctctgtacggggagagtgac
ctgtaa
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integrated database retrieval system
