Callorhinchus milii (elephant shark): 103190752
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Entry
103190752 CDS
T03088
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04270
Vascular smooth muscle contraction
cmk04625
C-type lectin receptor signaling pathway
cmk04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
103190752
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
103190752
09153 Circulatory system
04270 Vascular smooth muscle contraction
103190752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmk04131
]
103190752
Membrane trafficking [BR:
cmk04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
103190752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
TORC_N
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
103190752
NCBI-ProteinID:
XP_042199794
UniProt:
V9K7S5
LinkDB
All DBs
Position
Unknown
AA seq
1523 aa
AA seq
DB search
MSITPSGLSERFPIRRLPRQGAVVQKDLSPDKKHEKKNLEKSPPFEFDPTGLVQRCVIIQ
RDENGFGLTVSGDNPVFVQSVKEDGAAVRAGVQQGDRIIKVNGTLVTHSNHVEVVRLIKS
GSYVALTVLGRPPGSPQIPLSTSDGDSGTFLFPGQPAPVFSPTSSTERITSPTLMGEDTI
VHSQKLQILQSMLDTECQQYQLLKEKCQKNPTQQLLREKQEAEKRIHQVREQLHKASGIS
QDVPGSATLSETLSIVEATTEEVRELEPYLHSPSESEIMERIQTSFSQIETDVSPFAVQD
GLSPRDYPPSGSASFKDSGNCERAETDDSPDWDSQLGSPPLRGGAHIIGAEDDDFGNEAE
QVDIQCSCFQTLETLRSRPAHVVAFLHHVLSQFDPVPSLCYLYAEFYNQTNSKENRRVFV
EFYHLFLEKGANLKVQAPEGITAELERRRLDLIPEELQRQFVQTVQDNVLAEVQAHLQDF
RQKRNMGMTIGEVELSKLDLERSRDRNMCEQRERLCAEQLLLKIEEVLATLSPTEEEKSN
SMLDVILTYMKHLGVKVKDPRNLDRDRRIRVAFFPKKKASIKKEKEDEKKKRFQSILDPI
RRTSKQDRIAIEKAKILHQKQLNQPNRSASLPEHPEPVRLRPMGSSSDTTDGNQHLSPGA
VPGHEGPTERLPDPLAGPVLGKPFGDNPLSGDLSTSTPKPGTIFDYPTGLVQVIEEDQES
ERSVETATPPCTPRPGRRGESLGWGDGQGGSQSPSLSQTEEDQTHISDVEQDPTNWQQLV
TREVLAGLKPLEIKRQEVINELFHTERAHIRMLRVLDVIFQQKMVRDGTLPPGDIKHIFC
NLEAILQLHVSLNERMKKVWKKNENLVVDNIGEELLAWFSGPEEEKFKRAAATFCSNQPF
ALEFIKNKQKKDSRFQAVIQEAESKPQCRRLQLKDIIPTEMQRLTKYPLLLENIAKNTEQ
LEEKQKVRKAAECCRHILNYVNQTVKEAENKARLEDYQRRLDLSSLKQLDYPLIEEFRSL
DLTKRNMIHEGPLTWRVNKDKTIDLYTLLLEDILVLSQKQDEKLVLKCHSKNLAATADTK
HTFSPIIKLTSVLVREVATDNKAFFVISMSVDGAQIYELVAHTVSERKTWQYLITQASDS
IKPLPHQVSTDRSVTEGLQEDDVESIPAEAQGSSDDRGISPPDKEVNSVAFSAELPPRTQ
EPGVHSLPHDTRSNLCEGAVRRASATRILPSRADLALKKLTSLRQLLLHLIDADEENVVA
SLKHLTQQDYLHAPLQEEICAPRQEHTNVLLQDSAHLSLRRDTIYASLGLDTLHPSLGED
TMYTSLGENTSELLGENLMHSSSVSLECTTCEMPNEALHGRLELDMGSLPETSVTTRTCP
SSQITLETGKLEYSGKVERDDCAVEERFYDAPEVHSEERPLDEDGGRSQIRVSGSYLMLE
ELEEMQESCTDPNETPAQFPECTAGSPDLRPEECRADGADLRTQILQCFESLESDLKHLQ
AVELEFYSQRELEAASAQPVGNS
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atgagcataacaccatccgggctgagcgagaggtttcccatcagaagacttcccaggcaa
ggagccgtggtgcagaaggacctgtcgcctgataaaaaacatgagaaaaagaacttggaa
aaatctcctccatttgagtttgacccaacaggtctggtgcaacgctgtgttatcatccag
cgcgacgagaacggctttgggctgactgtcagtggggacaacccggtatttgtgcagtct
gtcaaagaggatggagctgcagtacgagctggggtgcaacaaggagacaggatcattaaa
gttaatgggacgttggtcactcactccaaccatgttgaagttgttcggttaatcaaatcc
ggctcctatgtagctctcactgtgctgggacggccgccagggtctccccagatccccctc
agcacctccgatggagattcggggactttcctgttccctgggcaaccagctccggtcttc
tctccaaccagcagcacagagagaatcaccagccccacactcatgggtgaagacaccatt
gttcacagtcagaagctgcagatcctgcagagcatgttggacactgagtgtcagcagtat
cagttacttaaggaaaagtgtcagaaaaacccgacacaacagctgctgcgtgagaaacag
gaggcagagaaacgcatccaccaggttcgggagcagctccacaaagccagcggcatctcc
caggatgtgccgggctcagccacactttccgaaactttgtcaattgttgaagcaacgact
gaagaggtgagagagttggagccgtatttgcactccccgagcgagagtgagataatggag
agaatccagacttccttcagtcaaatcgagactgatgtgagcccctttgcagttcaggac
ggcctcagccccagagactatcctcccagcggctcagcctccttcaaggacagcggcaac
tgtgagagggcggagacagacgatagtcctgactgggattcgcagttggggagcccccct
ctccggggcggagcccacatcatcggagctgaggatgacgattttggtaacgaagccgag
caggtggacattcagtgcagctgcttccaaaccctggagacattgcggtcccgcccggca
catgtggtggcgtttctgcatcacgtcctctcgcagtttgacccggttccatcgctctgc
tatctttatgctgaattttacaatcagacaaactcaaaggagaatcgcagagttttcgtg
gaattctaccatttattcctggaaaaaggagccaatctgaaggttcaggccccagaggga
atcaccgcggagctggagcggaggcgcctggatctaatcccagaggagctgcagcggcag
ttcgtgcagacggtgcaagacaatgtgttggcagaggtgcaggcccacctgcaggacttc
aggcagaaacggaacatggggatgacgattggcgaggtggaactctccaagttggatttg
gagcgaagtcgggatcggaacatgtgtgagcagcgggaacgtctgtgcgcggagcagctg
ctgctgaagattgaagaagttctggcgactttgtcaccaacagaggaggagaaaagtaac
tccatgttggacgtgatcctcacttacatgaaacacctcggggtgaaggtgaaggacccg
cggaatctcgaccgtgaccgtagaatacgagtcgcgttctttccgaagaaaaaggcgagt
ataaagaaggaaaaggaagatgagaaaaagaaacgcttccagagtatcctggacccgatt
cgccgcacgagcaaacaagaccggattgcaattgaaaaggccaagatactgcaccagaag
cagttgaaccaaccgaaccgctcggcctcactccccgagcacccggagccagtgagactc
cgaccaatggggtcatccagcgacaccacagacgggaatcagcacctgtcgcccggagct
gtccctggtcacgagggtccgacagagagactaccagaccctcttgctggcccggtgctg
ggaaagccgtttggagacaatccattatctggagacttgagtacgtccaccccgaagccc
ggcaccatcttcgactatccgaccggtctggtccaagtgatcgaggaagatcaagagtct
gagagaagtgtggagacggccactcccccctgcacccccaggccaggtcgcagaggggaa
agtctgggctggggggacgggcaaggcggctcccagtccccgtcactcagccagaccgag
gaggatcaaacgcacatctccgacgtggagcaggatcccaccaattggcagcaactggtg
acccgggaggtgctcgcaggcctaaaacctctggagataaaacgtcaagaagttatcaat
gagctgttccacacggagcgggcgcacatccggatgctccgagtcctggacgtgattttt
caacagaagatggtccgcgatggcacgctgccccctggggacatcaaacacatattctgc
aacctggaagccatcctacaattacatgtttcattgaatgaacggatgaaaaaagtctgg
aaaaagaacgaaaacctggtagttgataatatcggggaggaactgctggcctggttcagt
ggccccgaagaggagaagtttaagcgagcggctgccacgttctgcagtaaccagccgttt
gctcttgaattcatcaaaaacaaacagaagaaagattcccggttccaggccgtgatccag
gaggccgagagcaaacctcagtgtcggcggctgcagctgaaggacattattcccactgag
atgcagcgactgacaaagtacccgctgctgctggagaacatcgccaaaaacacggaacaa
ctggaggagaaacagaaagtgaggaaagcggctgaatgttgccggcatatcctaaactac
gtcaaccagactgtgaaggaagcagaaaataaagcgcggcttgaggattaccagcgtcgc
ctggacctgtccagtctgaagcaattggattatccgttgatcgaggagttccggagtctg
gaccttacaaagaggaacatgattcatgaggggcctctaacttggagggtgaataaagac
aagacaatcgatctctacacgttgctgctggaggatatcttggtattgtcgcagaaacag
gatgagaagctggtgttgaaatgtcatagtaaaaacctggctgcaactgcggacacaaag
cacacgttcagcccgatcatcaaacttacctctgtactggtgcgtgaggtggcaacagat
aataaagctttctttgtcatctccatgtcagtagacggagctcagatttatgagctggtg
gcacacactgtctcggagcggaaaacgtggcagtatctgatcacacaggcgtctgactcc
attaaacctctgccccatcaggtgtctacagaccgctctgtcactgaggggctccaggag
gacgatgtagaatcgataccagctgaagcccaaggatcaagtgatgatcgagggatctct
ccaccagataaggaggtgaattctgtcgcattcagtgctgagctgccgcccagaacccag
gagccaggagtccactcgctgccacacgacactcggagcaacctgtgcgagggagctgtg
cggagagcgtcagcaacacgtatactaccctctcgcgcagacctcgccctgaaaaaactt
acctcattgagacaattgctgcttcacttaatcgatgctgatgaggagaatgttgtggcc
tcgcttaagcaccttacacaacaggactatctgcatgcaccactgcaagaggaaatttgt
gcaccacggcaggagcacacgaatgtgcttctgcaagacagtgcacatctatcattgaga
cgggacacaatttatgcatcgctaggtttggacacattgcatccgtcgctgggagaggac
actatgtacacatcactgggagagaacacaagtgaattgttgggagagaacttgatgcat
tcgtcaagtgtaagcctggaatgtacaacttgtgagatgcccaatgaggcactgcacggt
cgcctggagttggacatggggtcactgccggagacgtcagtcaccacaaggacttgtccc
tccagtcagatcacactggaaacgggaaaattggaatattctgggaaagttgagcgtgat
gactgtgcagtagaggagaggttttatgatgctccagaagttcattcagaagaacgtcca
ctggatgaggatggtggacgatcccaaatccgtgtctcaggaagttacctgatgctggag
gagctcgaggagatgcaggaaagctgcacagatcccaacgagacacctgcgcagttccca
gaatgcacagcaggtagccctgacctaaggcccgaggagtgtcgggcggacggcgcagat
ctccgtacacagatcctccagtgctttgagagcctcgagtctgacctgaaacacctacag
gcagtggagctggagttttacagccagagggaactggaggcagcatcagcgcagccagtg
gggaacagctaa
DBGET
integrated database retrieval system
