Callorhinchus milii (elephant shark): 103191003
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Entry
103191003 CDS
T03088
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03440
Homologous recombination
cmk03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103191003 (top3a)
03460 Fanconi anemia pathway
103191003 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmk03032
]
103191003 (top3a)
03400 DNA repair and recombination proteins [BR:
cmk03400
]
103191003 (top3a)
Enzymes [BR:
cmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
103191003 (top3a)
DNA replication proteins [BR:
cmk03032
]
Eukaryotic type
DNA Topoisomerases
103191003 (top3a)
DNA repair and recombination proteins [BR:
cmk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
103191003 (top3a)
FA (Fanconi anemia) pathway
103191003 (top3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
HypA
Motif
Other DBs
NCBI-GeneID:
103191003
NCBI-ProteinID:
XP_042197042
LinkDB
All DBs
Position
Unknown
AA seq
1001 aa
AA seq
DB search
MTSLLRRCLSGEAVAMSRRRLQARQVLCVAEKNDAAKGIADILSGGRCRRREGFSKFNKI
YEYEYNLFGQNIKMVMTSVSGHLLELEFKAPFQKWYSCNPVSLFDAEVEKYCPEKYVDIK
RTLEREVHWCQALIIWTDCDREGENIGFEVIHVCKAVKPNLQVLRARFSEITPRSIRNAC
ENLLEPDQNISDAVEVRQELDLRIGASFTRFQTLRLQKIFPNVLSNQVISYGSCQFPTLG
FVVERFKAIQAFIPEPFYKIKVTHEKDDSSVEFNWKRNRLFNHTACLVLYQICMEDPVAT
VLDVFSKPKSKWRPLPLDTVEFEKLASRKLRINAKETMRVAEKLYTQGYISYPRTETNIF
PKDLNLSGLVQLQTPDPRWGGFAQGILDRGGPTPRNGSKTDQAHPPIHPTKYTNNLQGNE
QRIYEFVVRHFLACCSQDAQGQETTVEIRIADELFVAHGLMIIARNYLEVYPYDKWNAKV
IPVYESGATFQPSTIEMVDGETSPPQLLTEADLIALMEKHGIGTDATHAEHIEKIKSRMY
VGLTPDQRFLPGELGMGLVEGYDSMGYEMSKPDLRAELEGDLKLVCEGRKDRFAVLQQHV
LKYKQVFIEAVSKAKKLDEALSHYFGEASEIPQAEELRMEIPEPIRKCPQCGRDMFLKQK
RDGGYYLSCVGYPSCKCAAWFPDSVLEVRRDESVCPTCKPHPVHRLKFKFRRGSVPVLVP
LEFVGCIGGCDEMLREILDLRYLRVGPLPLANSQPGNQPLPGTARNQRPTGTGHNQPPSG
TGRNQPPTGTGRNQPPPGTGRNQPPPGTGRNQPPPGTGHNQPLGGRGNPHPGPRAGSAGI
LGVDDDNMVVCNCGQDALLLTVRKDGPNQGRKFYKCSTGNCNFFLWADQSEGGGVSTTTS
RGHFSRPSSDGGGGGGAMTCTCNEPVVTRTVQKDGPNKGRAFHTCAKPREQQCGYFQWVD
ENSQTQAERRPAGNAPPAKRARCCGLCHQPGHTRTKCPQNR
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgctgctgaggcggtgtctgagcggcgaggccgtcgccatgagccgccgccgg
ctgcaggcgcggcaggtgctgtgcgtggccgagaagaacgacgcggcgaaaggcatcgcc
gacatcctgtctggcggcaggtgccggaggagagaaggattctcaaagtttaacaagatt
tatgaatatgagtataatctgtttggtcagaatattaaaatggtgatgacctctgtctcc
ggtcacctgctcgagttagagttcaaagcaccttttcagaaatggtacagctgcaaccct
gtgtccctctttgatgctgaggtggagaagtactgccccgaaaaatatgtggatattaag
agaaccctggagcgggaggtgcactggtgtcaggctctcattatttggacagactgcgat
cgcgaaggagagaacatcggcttcgaagtcattcatgtttgtaaggcagtgaagcccaat
ctgcaggtgctgagagctcgtttctcggagatcacgcctcgctccatcaggaatgcttgc
gagaacctgctggagcctgatcagaacatcagtgatgctgtggaagtcagacaagagctg
gacctgagaatcggggcttcgttcaccaggtttcagaccttgcgcctccagaaaatcttc
cccaacgtgctgtcaaaccaggtcatcagctacggcagctgccagttccccacgttaggc
ttcgtggtggagaggttcaaagccatccaggccttcatccccgagcccttctacaagatt
aaagttactcacgagaaggatgattccagcgtggaatttaactggaagcgaaatcgactc
ttcaatcacacggcgtgcctggtgctttaccagatctgcatggaggatcctgtagcgaca
gtgctggatgttttcagtaaaccgaagagcaagtggcgacctttacccctcgacaccgtg
gaatttgagaagctggcctcgcggaaactgaggataaacgccaaggaaaccatgcgagtg
gctgagaagctgtacacacagggttacatcagttatcctcgcacagagactaacatcttc
cctaaagatctgaacctgtctgggctggtgcagctgcagaccccggaccctcgctggggt
ggttttgctcagggtatcctggaccgaggtgggccgacaccccgcaacgggagcaagaca
gatcaggcccatccccccatccaccccaccaagtacaccaacaacctgcagggaaacgag
cagcgtatctatgagtttgttgtgcgtcacttcctggcgtgctgctcacaggacgcccag
ggccaagagactacggtggagatcaggatcgcggacgagctgtttgtggctcatgggctg
atgatcattgctcgcaactatctggaggtttatccctatgataagtggaacgccaaggtt
atcccggtgtacgagagcggcgccacgttccagcccagcaccatcgagatggtggatgga
gagaccagtcccccgcagttactcactgaggcggacctcatcgctctgatggagaaacac
gggatcggcactgacgccactcacgccgagcacattgagaagatcaagtcccgaatgtac
gtggggctgactcccgatcagaggttccttcctggggaactgggcatgggcctggtggaa
ggctacgattcgatgggttatgaaatgtcgaagccggacctgcgggcggagctggagggg
gacctgaagctggtctgtgaggggagaaaggacaggtttgcggtgctccaacagcatgtt
ctgaaatacaagcaggtcttcatcgaggctgtgtccaaggccaagaagctggatgaggct
ctgtctcactattttggagaagccagtgaaatcccgcaagctgaggagctccgcatggag
attcctgagcccatccgcaagtgtccccagtgtgggagagacatgttcctcaaacagaag
cgagatggcgggtactacctgtcctgtgtggggtatccaagctgtaagtgcgctgcttgg
tttccagattctgtgctcgaggtcaggcgggatgagagcgtgtgtccaacatgtaaaccg
catcctgttcacaggttgaagtttaagttccggcgtggcagtgtgcctgtgctggtgccg
ctggagttcgtcggttgtattggaggctgcgatgaaatgctgcgtgagattctggacctg
cgatatctccgagtgggacctctgccgctggcgaacagtcagcctggcaaccagccacta
cctggcacagcacgtaaccaacggccgactggcacagggcataaccagccaccgtccggc
acagggcgtaaccaaccgccaaccggcactgggcgtaaccagccaccgcccggcactggg
cgtaaccagccaccgcccggcacagggcgtaaccagccaccgcctggcacagggcataac
cagccacttggaggtcgtgggaaccctcacccaggcccgcgggctgggtcggctgggatc
ctgggtgtggatgatgacaacatggtggtgtgtaactgtggccaggacgctttgctgctg
accgttcggaaggacgggcccaaccagggtcggaaattctacaagtgcagcacaggaaac
tgcaacttcttcctgtgggccgaccagagcgagggaggcggggtcagcacgaccaccagc
agggggcacttcagtcgcccgagcagcgatggaggaggcggagggggggcgatgacgtgc
acatgcaatgagccagtggtcacgcggacagtacagaaggatggacccaacaaggggcgg
gcgttccacacctgcgcgaagccccgcgagcagcagtgcggctactttcagtgggtggat
gagaacagccagacacaggctgagagaagaccagcaggaaacgctcccccagcaaagcga
gcccggtgctgtgggctgtgtcatcagccaggacacacaagaacaaaatgtccccagaac
aggtga
DBGET
integrated database retrieval system
