Callorhinchus milii (elephant shark): 103191044
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Entry
103191044 CDS
T03088
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmk03041
]
103191044
Enzymes [BR:
cmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103191044
Spliceosome [BR:
cmk03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103191044
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
103191044
NCBI-ProteinID:
XP_007910174
UniProt:
A0A4W3I4F2
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MRGFGGDRDRSRERGSPRFGGLSRGGPSLGKKFGQPGERLRKKKWDLDDLPKFEKNFYVE
HPDVVRLTDFEIEEFRKKKEITTKGTNCVKPVTQFHHASFPSYVMDVLASLNFVEPTPIQ
CQGFPVALSGRDMVGIAQXGSGKTLAYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQ
QVQLVAEDYGKSSRIKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRR
CTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYVQIN
VGALELSANHNILQIVDVCQETEKDLKLLHLMEEIMAEKENKTIIFVETKRRCDELTRRM
RRDGWPAMCIHGDKSQPERDWVLNEFRTGKAPILIATDVASRGLDVEDIKFVINYDYPNS
SEDYVHRIGRTARSTNKGTAYTFFTPGNVKQARELIKVLEEAHQAINPKLLQLVDHGRGT
SRGGRSRYRPSGSNPNTMYREDRDRGRRGDRFRDLDSDRRDRGDGRGRFGGQRESGDQGF
RSTQQTSTFGSGVFGTQTSTQYPNFTQGGVYGGATQSIFGTPGSTAFGKAGGFQATNAAS
SFASAGYPASTAGATYGSATFGSSSSTTAGRTAQASSLLSRQNGLGQQPQPLLAQAFQQG
GSLLSYMTQAGYQYPPPPPPPPQQGTARK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaggggattcggcggagaccgtgaccggagcagagagcggggaagcccacggtttgga
gggctcagccgtggtggcccatcgcttgggaagaagttcggacagccaggtgagcgcctg
aggaaaaaaaagtgggaccttgatgacctgccaaaatttgagaagaacttctacgtggaa
cacccagacgtcgttagattgactgattttgagatcgaagagttccgtaaaaagaaagag
atcacaacaaaaggaaccaactgtgtaaaaccagtcacgcagtttcaccacgccagcttc
ccatcctatgtgatggacgtcctggcctcactgaactttgtggagccaacaccgatccag
tgccagggtttccctgtggcgctttccgggcgtgacatggttggaatcgctcagnacggc
tctggcaaaactcttgcatacttgctgcccgccattgtgcacatcaatcaccagccattc
ctggagcgcggtgatggtcccatctgcttggtgttagcaccgactcgagagctggcacag
caggtgcagttggtggcagaggactacggtaaatcttcgcggataaagagcacctgtata
tatggaggtgcacctaaaggcccacagatccgggacctggagagaggagtggaaatctgc
atcgcgaccccaggccgtttaattgactttctggaagccgggaagactaacctgcggcgc
tgtacgtacctggtgttggacgaggccgaccggatgctggatatgggcttcgagcctcag
atccggaaaattgtggatcagatcaggccggacaggcagacgctgatgtggagcgccacc
tggccaaaagaggtccggcagctagcagaggatttcctgcgggattatgtacagatcaac
gtgggagccctggagctgagcgccaaccacaacatcctgcagattgtggacgtgtgccag
gagactgagaaagacctcaagctgcttcatctgatggaggagatcatggcagagaaagag
aacaagaccatcatctttgtggagacaaagcggcgttgtgacgaactgacccgcaggatg
aggcgagatggctggccagctatgtgtatccatggagacaaaagtcagccggagagagac
tgggttctcaatgaattccggacaggaaaggctccgatccttatagcaactgacgttgcc
tctcgtggtctagatgtggaggacatcaagttcgtcatcaactacgattaccccaactcc
tctgaggactacgtgcaccgcattggccgaacagcccgcagcaccaacaagggcacggcc
tacaccttcttcacccccggcaacgtcaagcaagccagagagctgatcaaggtgctggag
gaggctcatcaggctatcaaccccaaactcctgcaacttgtggatcacggcagaggaacc
agcagaggaggtcgatctcgttaccgcccgtccggctccaaccccaacaccatgtaccgc
gaggacagagaccgcgggcggcgaggagaccgattccgagacctggacagcgaccggagg
gaccggggggatggcaggggcaggtttggggggcagcgagagagcggggaccaggggttc
cgctcgacccagcagaccagcaccttcgggagcggcgtatttgggacccaaacctccacc
cagtaccccaacttcacccagggcggggtgtacgggggggccacccaaagcatcttcggg
accccaggctccacggccttcgggaaggcggggggcttccaggccaccaacgccgccagt
agttttgcgagcgctgggtatccggctagcactgcgggggccacgtatggctcggccacc
ttcgggagttcatcctcaacaactgcggggagaacggcacaggcctcaagcctactgtcc
aggcagaacgggctaggccaacagccacaaccactgctagcacaggccttccagcagggc
gggtcactgctgagctacatgacccaggccggctatcaatacccccctcccccccctcct
ccccctcaacaaggtacagccaggaaataa
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integrated database retrieval system
