Callorhinchus milii (elephant shark): 103191220
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Entry
103191220 CDS
T03088
Symbol
polb
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103191220 (polb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmk03400
]
103191220 (polb)
Enzymes [BR:
cmk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
103191220 (polb)
DNA repair and recombination proteins [BR:
cmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
103191220 (polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
103191220 (polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
NTP_transf_2
Cdd1
HHH_2
ExoX-like_C
Motif
Other DBs
NCBI-GeneID:
103191220
NCBI-ProteinID:
XP_042200499
UniProt:
V9KTT2
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MSKRKAPMESTNEGITDFLIELANFEKNVNRAMHKYNVYRKAASVIAKYPTKIKSGAEAK
KLEGIGDKIAKKIDEFLATGKLQKLEKIRQDDVSSSINFLTRVTGIGPAAARKLVDEGVK
NLEDLRNNEDKLNYHQRIGLKYFEDFEKRIPRNEMLKMQDLVLEEVKKLDPEYISTVCGS
FRRGALSSGDMDILLTHPDYTSESTKKPKLLHKVVECLERTGFVTETISKGDTKYMGVCQ
LPDDNDACDYPHRRIDIRLIPKDQYFCGVLYFTGSDIFNKNMRTTALEKGFTLNEYTIRP
MGSTGIPGEPLPVDSEQDIFDYIDWVYREPKDRSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaggaaggcccccatggagagcaccaatgagggcatcactgacttcttaatc
gaattggcgaactttgaaaagaatgtgaatcgagccatgcacaagtacaacgtctacagg
aaagcagcttccgttatcgcgaaatacccaacaaaaatcaagagtggtgccgaggcaaaa
aagctggagggaattggtgacaagattgcgaagaaaattgacgagtttctggcaacgggg
aagctccagaaactggagaagattcgtcaggatgatgtcagttcatccattaacttttta
actcgagtgactggaataggtcctgcagcagcaagaaagcttgtggatgaaggagtcaaa
aacttggaagatctgaggaataatgaagataagttaaattatcaccagaggattggtttg
aagtattttgaagatttcgaaaagagaattcctcgaaatgaaatgttgaaaatgcaggac
ctagttctggaagaagtcaagaagttggatccagagtatatctccactgtttgcggaagt
ttcagacgaggtgccttgtccagtggtgatatggatattcttttgactcatccagactat
acctcagagtcaaccaaaaagccaaagcttctccacaaagttgtggaatgtctggaaagg
acaggatttgtgacggaaaccatttctaagggggacaccaagtatatgggtgtgtgtcag
ttaccagatgacaatgatgcctgtgactatccacacaggagaattgacatcaggctgatt
ccaaaagatcagtatttctgcggagtgctgtatttcaccggcagtgacatatttaataag
aacatgaggactaccgcactggaaaaaggcttcacattgaacgagtataccattcgccca
atgggatccacaggaattccaggtgagccgctgccagtggacagtgagcaggacatcttt
gactatattgactgggtttatcgagaacctaaagatcgaagcgagtga
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