Callorhinchus milii (elephant shark): 103191473
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Entry
103191473 CDS
T03088
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103191473 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmk03021
]
103191473 (smarcd1)
03036 Chromosome and associated proteins [BR:
cmk03036
]
103191473 (smarcd1)
Transcription machinery [BR:
cmk03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103191473 (smarcd1)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103191473 (smarcd1)
PBAF complex
103191473 (smarcd1)
GBAF(ncBAF) complex
103191473 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
103191473
NCBI-ProteinID:
XP_007910652
LinkDB
All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
MAARGFQTMSAGPGAPPPVRVAPSQQQGLYRPAPPGQGYPRPGMPPGSRMPPQGASMGPP
GPSYGGSPAVRPGMPQSMMDQSRKRPAPQQIQQAQQQAAQNRNHNAKKKKMADKILPQRI
RELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPPKADA
EDGEGTVASWELRVEGRLLEDSAVSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVE
WHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQ
ALWQYIKTHKLQDPHEREFINCDKYLQQIFECQRMKFSEIPQRLHALLMPPEPIIINHVI
SVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKIHETIETINQLKTQ
REFMLSFARDPQGFINDWLQSQCRDLKSMTDVVGNPEEERRAEFYFQPWAQEAVCRYFYS
KVQQRRQELEQALGIRNT
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcgaggttttcaaacaatgagcgcggggcccggggcgccgccccccgtcagg
gtggcccccagtcagcagcaggggctgtaccggcccgcgccccccggccagggctacccg
cgcccagggatgcccccaggcagcaggatgccacctcagggggcttccatgggacccccg
ggcccttcttacggcggtagcccagcggtacggcccggcatgcctcaatccatgatggac
cagtctcgcaagcggccggcgcctcagcagatacaacaagcgcagcagcaagcagctcag
aaccgcaaccacaacgccaagaaaaagaagatggcagacaaaattctacctcagaggatt
cgggagttggtaccggaatcccaggcctacatggatctgctagcgttcgagaggaagttg
gatcagactataatgaggaaacggctggacattcaggaagcactgaagcgtccaataaag
caaaagcgaaagcttcgaatatttatttccaacacgttcaaccccccgaaagcggacgca
gaggacggggaaggaactgtggcctcgtgggagctccgtgtggaagggaggcttctggaa
gattcggctgtatcgaagtacgatgccacaaaacagaagcggaaattttcctccttcttc
aaatcgctcgtgatcgagttggacaaagacctctatggacctgacaaccacctggttgag
tggcacaggacagccacaacccaggagaccgatggtttccaggtgaagagaccgggtgat
gtgaatgtccgctgcacagtgttgctgatgctggattaccagccgccccagtttaagttg
gatccacgactggcccggctgctgggtatccacactcagaccaggcccgtcatcatccag
gccctgtggcagtacatcaaaactcacaaactgcaggatccgcatgagcgcgagtttatc
aactgtgacaaataccttcagcagatctttgagtgccagcgaatgaagttctcggaaata
ccgcaaaggctccatgccctgctgatgcctccagagcccatcatcatcaaccacgtgatc
agcgtggaccctaacgaccagaagaaaaccgcttgctatgacatagatgtggaggtggac
gacactctaaagacccaaatgaattcctttctcctctctaccgccagccagcaggaaatc
gctgctctggataacaagatccatgagaccatcgagaccatcaaccagctgaagacccag
agagagtttatgctgagcttcgctagggacccccaaggcttcatcaacgactggctgcaa
tcccagtgccgggatctcaagtccatgacggatgtggtgggaaacccagaggaggagcga
agggcagagttctacttccagccctgggcccaggaggctgtgtgcagatacttctattcc
aaggtgcagcagaggaggcaggagttggagcaagcgctagggatacgcaacacctaa
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