Callorhinchus milii (elephant shark): 121852118
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Entry
121852118 CDS
T03088
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03018
RNA degradation
cmk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121852118
09123 Folding, sorting and degradation
03018 RNA degradation
121852118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
121852118
03041 Spliceosome [BR:
cmk03041
]
121852118
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121852118
mRNA degradation factors
5'-3' decay
Lsm complex
121852118
Spliceosome [BR:
cmk03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
121852118
Complex C
U2 snRNP components
121852118
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
121852118
NCBI-ProteinID:
XP_042202155
UniProt:
V9LKC1
LinkDB
All DBs
Position
Unknown
AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEAIQQKQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgttgttctactcttttttcaagtccctggtggggaaggatgtggtggtggaactgaag
aacgatctcagcatctgcggaactctacactccgttgatcagtacctgaacatcaaactg
accgacatcagcgtcacggacccagagaagtatcctcacatgctctcggtgaagaactgc
ttcatccgaggctcggtggttcgctacgtccagcttcccgcggacgaggtcgacacgcag
ctgctccaggacgccgccaggaaagaggccattcagcagaagcaatga
DBGET
integrated database retrieval system
