Carnobacterium maltaromaticum: BN424_1142
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Entry
BN424_1142 CDS
T02342
Symbol
polA
Name
(GenBank) DNA polymerase I family protein
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cml
Carnobacterium maltaromaticum
Pathway
cml03030
DNA replication
cml03410
Base excision repair
cml03420
Nucleotide excision repair
cml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN424_1142 (polA)
03410 Base excision repair
BN424_1142 (polA)
03420 Nucleotide excision repair
BN424_1142 (polA)
03440 Homologous recombination
BN424_1142 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cml03032
]
BN424_1142 (polA)
03400 DNA repair and recombination proteins [BR:
cml03400
]
BN424_1142 (polA)
Enzymes [BR:
cml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN424_1142 (polA)
DNA replication proteins [BR:
cml03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BN424_1142 (polA)
DNA repair and recombination proteins [BR:
cml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BN424_1142 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN424_1142 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_polI_exo1
5_3_exonuc_N
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
CCO10584
UniProt:
K8E381
LinkDB
All DBs
Position
1189810..1192470
Genome browser
AA seq
886 aa
AA seq
DB search
MTKKNKLLLIDGSSIAFRAFYAIPGSLDRFMNKNGLHTNALFSFHRMLDNEMKKEQPTHV
LVAFDAGKTTFRNAFYDAYKDGRQKTPGEFKEQMPYLRDLLEGFGIPHYELDNYEADDII
GTLATVVDPNEFDVVVVSGDRDLTQLAKENVRVDITIKGVSEIEENTPAYLMEKYGIEPH
QIIDMKGLAGDSSDNIPGVTNIGEKTALKLLHEFGSVEGVYENIDGMKPSKRKENLINDK
EQALLSKKLATIEVDAPLEIKVDELLYTGKDVGKLIEFYKEMDFKSFLKDLDTTEYDEEN
KIEKAEIIFEFVTELKADMFGPIGGLYVEMLTDNYHTAEIVGLSWSNGEKIYVAEPDVAL
ASPIFQEWAKDPENKKQVFDAKRTVVALQRYDTTLEGVDFDVLLASYILNTNDNSKDLAE
VAMEHDYYEVAADESIYGKGAKLAIPEDASVLNEHLARKIKAIEVLSIKLKQELIDSEQT
ALFYEMELPLSMVLAEMEMTGIKVNANRLLEMKAEFAIRLTDIENRIYEEAGETFNINSP
KQLGVILFEKMQLPVIKKTKTGYSTAVDVLEQLRPQAPIVDDILHYRQIAKIQSTYVEGL
LKVINGNTGKVHTRYVQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQAFVPSHEGWKIFA
SDYSQIELRVLADISNDQHLKEAFLEGQDIHSSTAMRVFGIEKAEDVTGNMRRQAKAVNF
GIVYGISDYGLSQNLGITRKEAQTFIDTYFEKYPGVKQYMSDIVREAKDKGYVETLFHRR
RFLKDINSRNFNLRSFAERTAMNTPIQGSAADIIKVAMIQMDRRLKAENLKTKMLLQVHD
ELIFEAPEEEIAILEKLVPEVMESAVKLNVPLKVDSSYGDSWYDAK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaaaataaattactattaattgatggtagtagtattgcgtttcgagcgttt
tatgcaattccaggttcattagatcgttttatgaataaaaatggtttacacacaaatgcg
ctgtttagttttcatcgtatgttagacaatgaaatgaaaaaagagcaacctactcatgtt
ctagttgcttttgatgctgggaaaacaacttttcgtaatgctttttacgatgcctataaa
gatggtcgccaaaaaacgccaggtgaatttaaagaacaaatgccttatttgcgtgacttg
ttagaaggttttgggattcctcattatgagttagataattatgaagcggatgatattatt
gggacattagctactgttgttgatccaaatgaatttgatgttgttgtagtttcaggtgac
cgagatttaactcagttagcgaaagaaaatgtgcgagtagatattacaattaaaggtgtt
agtgaaattgaagagaatacacctgcctatctaatggaaaaatatggcattgaacctcat
caaattattgacatgaaaggtttagctggagattcttctgataatattccaggagtaaca
aatattggagaaaaaacagctttaaaactgttacatgaatttggttctgttgaaggtgtt
tatgaaaatatagatggcatgaagccaagtaaacgtaaagaaaatctgattaacgataaa
gaacaagctttgttaagtaaaaaattagcaacgattgaggtcgatgctccacttgaaata
aaagtagatgaattgctttacactggcaaagatgttggtaagctaatagagttttataaa
gaaatggatttcaagtcattcctaaaagatttggatacaacagagtatgatgaagaaaat
aaaattgaaaaagccgaaattatttttgaatttgttacagaattaaaagcggatatgttt
gggccaatcggcggattatatgtcgaaatgctaacggataattatcacactgcggagatt
gttggtttaagttggagtaatggtgagaagatttatgttgcagaacctgacgtagctttg
gcatctcctatttttcaagagtgggccaaagatccagaaaataaaaaacaagtttttgat
gcaaaacgtacagttgtggctttacaacgttacgatacaaccttagaaggggttgatttt
gacgtcctactagcatcttacattctaaatacaaatgataatagtaaagatttagccgaa
gtagctatggaacatgattattatgaagttgctgcagatgaaagcatttatggaaaaggg
gctaagcttgccataccagaagatgcttctgttttgaatgaacatcttgctcgaaaaatt
aaagcaatagaagtcttaagtatcaaattaaagcaagagttgattgatagcgaacaaaca
gctttattttatgagatggaattgcctttatccatggtgttagctgaaatggaaatgact
ggaattaaagtcaatgcgaatcgtttactagaaatgaaagctgagtttgccattcgttta
acagatattgaaaatcgcatttacgaagaagctggagaaacatttaatattaattctcct
aagcaattaggtgtgattttatttgaaaaaatgcagttaccagttattaagaaaacaaaa
acgggttattcaacggctgttgatgttttagaacaactgcgcccacaagcaccgattgta
gatgatattttacattatcgtcaaattgctaaaatccaatcaacctatgttgaaggatta
ttaaaagttattaacgggaatacaggaaaagttcatactagatatgttcaaacgttaact
caaacgggccgtctaagctctgttgatcctaatttacaaaatatcccgattcgcttagaa
gaaggtcgcaaaattcgtcaagcttttgtaccaagtcatgagggctggaagatctttgct
agtgattattcacaaattgaattgcgtgttttagcggatatttcaaatgatcagcatttg
aaagaagcctttttagaaggtcaggatattcactcaagtacagcaatgcgtgtttttggc
attgaaaaagctgaagatgtaactgggaatatgcgccgtcaagcaaaagccgtgaacttt
ggaattgtctatggtatcagtgattatggtttatcgcaaaatcttggaataaccagaaaa
gaagcacaaaccttcatagatacttattttgaaaagtatcctggagtaaaacaatatatg
agtgatatcgttcgagaagctaaggataaaggctatgtagaaactttattccatcgccgt
cgtttcttaaaagatattaattcacgcaactttaatctacgctcatttgctgaaagaaca
gcgatgaatacaccgattcaaggtagtgctgccgatattattaaagttgccatgattcaa
atggatcgtcgcttaaaagccgagaatttaaaaacaaagatgttgctacaagtacatgat
gaattgatttttgaggcacctgaggaagaaattgctattttagaaaaattagttcctgag
gttatggaatcagcagttaaattaaatgtacctttaaaagtcgatagcagctatggtgat
agttggtacgatgcaaaataa
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