Carnobacterium maltaromaticum: BN424_1400
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Entry
BN424_1400 CDS
T02342
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
cml
Carnobacterium maltaromaticum
Pathway
cml03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BN424_1400 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cml03400
]
BN424_1400 (uvrB)
DNA repair and recombination proteins [BR:
cml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN424_1400 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BN424_1400 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
Endonuclease_1
AAA_16
AAA_7
AAA
AAA_5
AAA_25
AAA_22
CsgA
CSN11_N
DUF87
Motif
Other DBs
NCBI-ProteinID:
CCO10842
UniProt:
K8E3H1
LinkDB
All DBs
Position
1438464..1440443
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AA seq
659 aa
AA seq
DB search
MKDTFDLVSKYQPNGDQPEAIRQLVKGINEGRKEQTLLGATGTGKTFTVSNVIQQVNKPT
LVIAHNKTLAGQLYGEFKEFFPNNAVEYFVSYYDYYQPEAYVPSSDTYIEKESSVNDEID
KLRHSATSSLIERRDVIVVASVSCIYGLVNPLDYKEHVLSIRQGAEMERNELLRRLVEMQ
FERNDIDFQRGRFRVRGDVVEIFLASRDSEAIRVEFFGDEIERIREIDVLTGEIKADVEH
VPIFPATHFIANADKTREAVNNIKAELEARLKVLRGEDKLVEAQRLEQRTNYDMEMMLEM
GYCSGIENYSRQMDGRKAGEPPYTLLDFFPDDSMIVIDESHITMSQIRGMYNGDQARKQR
LVDYGFRLPSALDNRPLRLEEFEEHVNQIMYISATPGPYELERTPEVVQQIIRPTGLLDP
IIEVRPIHGQIDDLIGEINARSERNERVFITTLTKKMSEDLTNYLKEVGIKVKYLHSDIK
TLERTEIIRDLRLGEFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRSERSLVQTIGR
AARNSNGKVIMYADKMTDSMKAAIDETGRRRATQEAYNKEHGIVPQTIIKEVRDLISITK
AVDDSNDYDSAAEMINDLTQAERKELIVKMEMEMRAAAKELDFEKAANLRDIVLELKAK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagatacattcgatttagtatcaaaatatcaacctaatggggatcagcctgaggcg
attcgtcagttagtcaagggaattaatgagggacgaaaggaacaaacacttttgggagcg
acggggactggtaaaacatttacagtctcaaacgtcattcaacaagtcaataaacctacc
ttagttatcgctcataataaaacattagctgggcaattatatggagaatttaaagagttc
ttccctaataatgctgttgaatattttgttagttattatgattattatcaaccagaagca
tatgtcccttctagtgatacgtatattgaaaaggaatcaagtgtcaacgatgaaatcgat
aaactacgacattcagccacaagttcattaattgagcgacgtgatgtaattgttgtagct
tcagtttcctgtatttatggcttggttaaccctttagattataaagagcatgtcctttca
attcggcaaggcgcagaaatggaacgcaatgaattactacgccgcctagtcgagatgcaa
tttgagcgcaatgatattgattttcaacgaggtcgttttagagttcgtggcgatgtggtt
gaaatatttttagcttcaagggatagtgaagcgattcgtgtagagttttttggtgatgaa
attgaacggattcgtgaaattgatgtactaacgggtgagattaaagcagatgttgagcat
gtacctatttttcccgcgactcattttattgcaaatgcggataagactcgtgaagccgtt
aataatattaaagcagaacttgaagctcgtttaaaggttttacgcggggaagataagcta
gtagaagcacaacgtttagaacaaagaacgaactatgatatggaaatgatgctagaaatg
ggctattgttctggtattgaaaactattctagacaaatggatggtcgtaaggctggagag
ccaccatatacattgttagacttctttcctgatgattcaatgattgtgatagatgagtca
catattacgatgtcgcaaatcagaggaatgtacaatggtgaccaagctcgtaaacaacgt
ttggttgattatggattccgtttaccaagtgcattagataatcgtccattacgtttagaa
gagtttgaagaacatgtgaatcaaattatgtatatttcagcaacacctggtccttatgaa
cttgagcgaactccagaagttgttcagcaaattattcgtccaactggtttgttggatcct
attattgaagttcgaccaattcatggtcaaattgatgatttgattggagagataaatgca
cgatcagaacgaaatgagcgtgtctttattaccacactaactaaaaaaatgtcagaagac
ttaacaaactatttgaaagaagttgggattaaagttaagtatctccatagtgatattaag
actcttgaacgaaccgaaatcattcgtgatttacgcttaggagaatttgatgttctgata
gggatcaatttattacgtgagggaatcgatgttcccgaagtctccttagtggctatttta
gatgcagataaagaaggctttttacgtagtgagcgttcattggttcaaacgattggacga
gctgctagaaattcaaacggaaaagtaattatgtatgcagataaaatgacggattcaatg
aaagctgcgattgatgaaacgggtcgtcgtcgggctactcaagaagcctacaacaaagaa
catgggattgtaccgcaaacgattattaaagaagttcgtgatttaatttcgattactaaa
gctgtagatgactcaaatgattacgattcagctgcagaaatgattaatgatttgacgcaa
gcagagcgtaaagaattgattgtgaaaatggaaatggaaatgcgtgctgctgcaaaagag
cttgattttgaaaaagcagcaaacttaagagatattgtcttagagttgaaagctaagtaa
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