Carnobacterium maltaromaticum: BN424_1514
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Entry
BN424_1514 CDS
T02342
Name
(GenBank) PHP domain protein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cml
Carnobacterium maltaromaticum
Pathway
cml03030
DNA replication
cml03430
Mismatch repair
cml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN424_1514
03430 Mismatch repair
BN424_1514
03440 Homologous recombination
BN424_1514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cml03032
]
BN424_1514
03400 DNA repair and recombination proteins [BR:
cml03400
]
BN424_1514
Enzymes [BR:
cml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN424_1514
DNA replication proteins [BR:
cml03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN424_1514
DNA repair and recombination proteins [BR:
cml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN424_1514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
Motif
Other DBs
NCBI-ProteinID:
CCO10955
UniProt:
K8E3U6
LinkDB
All DBs
Position
1552156..1553610
Genome browser
AA seq
484 aa
AA seq
DB search
MTFVHLQVISAFSLLKSTTSIEKLVISAKNKGYSAIALTDHNVLYGVVDFYKCCLKHNIK
PILGLTLDIAGVMDSGNNYPIVLLAENLEGYQNLMALSTEKQLLPDGERLDFQHIKPYSA
HVIAVTPGETGEIEQALLNKNPQLADDITTKWLDLFKKENFYLGVQIHQKLQPIQSNLKA
LAETKHLKTVALHDIRYLDPNDDFSTKVLRAIDAGEKIDLAIESTSGPFYLPEMSGIRER
FATAGLEKEVEETVKLANRIQPEILLHQHLLPRYPVPTDAKTEDYLAEQCFKGLQKRVPN
ADERYQKRLNYELSVIQKMGFSDYFLIVWDLMAYAHKTKILTGAGRGSAAGSLVSYVLEI
TDVDPIEYDLLFERFLNEERFTMPDIDLDFPDNRREEMLIYVKNKYGQGHVAQIATFGTL
AAKMALRDVARVFGLSQNEANVWSKAIPTVLGITLEEAFKTSSSLKKLVNENEKINFYLI
QLNA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgtacacttacaagtaatcagtgcctttagtcttttaaaaagtacaacttca
attgaaaagttggttatttctgctaaaaataaagggtatagtgcaatagctttaacggat
cacaacgtactatacggggtcgtggatttttataaatgttgtttaaagcataacattaaa
cctattttaggtttaacactagatattgcaggggtaatggatagtgggaataattatccg
atagttttattagctgaaaatttagaaggatatcaaaatttgatggctttgtctactgaa
aaacagcttttacctgatggggaacggcttgattttcaacatataaaaccatactctgca
catgtcattgcagttacacccggtgaaactggggaaatcgaacaggctttgcttaataaa
aatccccaactagctgatgatattacgacgaaatggttggacttatttaaaaaagaaaat
ttttatttaggtgttcaaatccatcaaaagttacaaccaattcagtcaaatttgaaggca
ttagctgaaacaaagcatttgaaaactgtcgcattacatgatatacgctatttagatcca
aatgatgatttcagtacaaaggtgctgcgtgctattgatgcaggtgaaaaaattgattta
gctatcgagtctaccagtggccctttctatttacctgaaatgtctggaatacgagaacga
ttcgcaacagctggtttagaaaaagaagttgaggaaactgtaaaattagctaatcgaatt
caaccagaaatcttattgcaccaacatttgcttccgagataccctgttccaacagatgct
aaaacagaagattatttagcagaacaatgttttaaagggttacaaaaacgtgttcctaat
gcagatgagcgttatcaaaaacgtttaaattatgaattaagtgtcattcagaagatgggt
ttttcagattatttcttaattgtttgggacttaatggcctatgctcataaaacgaagatt
ttaacaggagcgggtaggggttcagctgcaggttcattggtttcttacgtgcttgaaatt
acggatgtagatccaattgagtatgatttgctttttgaacgtttcttaaacgaagaacgt
tttacgatgccggatattgatttagattttccggataacagacgagaagaaatgttaatc
tatgttaaaaataaatatggacagggccatgtggcacaaattgcgacatttgggactctc
gcagccaaaatggctttacgagatgtagctcgtgtctttggcttgagccaaaatgaagcg
aatgtttggtcgaaagctattcctacggtactagggattacccttgaagaagcttttaaa
acatcaagtagtttaaaaaaattagtgaatgaaaatgaaaaaataaacttttatttgata
cagctaaacgcatag
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