Carnobacterium maltaromaticum: BN424_1922
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Entry
BN424_1922 CDS
T02342
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha subunit, Gram-positive type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
cml
Carnobacterium maltaromaticum
Pathway
cml03030
DNA replication
cml03430
Mismatch repair
cml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN424_1922 (polC)
03430 Mismatch repair
BN424_1922 (polC)
03440 Homologous recombination
BN424_1922 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cml03032
]
BN424_1922 (polC)
03400 DNA repair and recombination proteins [BR:
cml03400
]
BN424_1922 (polC)
Enzymes [BR:
cml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN424_1922 (polC)
DNA replication proteins [BR:
cml03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN424_1922 (polC)
DNA repair and recombination proteins [BR:
cml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN424_1922 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
tRNA_anti-codon
HHH_6
RNase_H_2
DNA_pol_A_exo1
DEDDh_C
Zn_ribbon_8
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
CCO11363
UniProt:
K8EHS7
LinkDB
All DBs
Position
complement(1941032..1945381)
Genome browser
AA seq
1449 aa
AA seq
DB search
MSLSQEELFQKLLEQINLHQELDYQPYFEKASIRKVTVHKQSKLWHFDFYFQDILPFEIY
QNFSEKLQIAFRSIAAISFSIETENPELTIEKLEHYWPEAVKRSGVSSPIINQLFRQQLP
VLNLKKVQLYVENEVVKGHLTNQYLPPVEEHYQKLGFPKFRIEPVIDEEANTAKLAEFKA
KKEEAEQLLAERAADNLQKAEEERKRNGGDNKVANLPKGKLVLGRAINDKEEIKPMAEII
EEERRVTIEGYVFDVEVRVLRSERQILILKITDYTSSFAVKMFSNSPEDEAVFAALKKGM
WVRARGAVQEDNFMRDLVMSARDITEVSRELRKDKADEDKKRVELHLHSNMSQMDATNNI
TDLVEQAAKWGHPAVAITDHSGAQSFPDAYHAGKKNGVKILYGIEANIVDDGVPIAYNPK
HIALSEATYVVFDVETTGLSAVYDTIIELAAVKMYKGNIIETFEQFIDPGHPLSQTTINL
TGITDDMVRGSKSEEEVLRLFKEFSGDDILVAHNASFDMGFLNTSYGKYDIAEAENPVID
TLEMSRFLHPQLKSHRLNTLAKRYGVNLEQHHRAIYDSESTGQLCWIFIKEAREEHDMHY
HDELNMHIGEGDSYKRARPFHATIIATTQDGLKNLFKLVSMSMVNYFYRTPRIPRSKLTE
YREGLIVGSACSSGEVFEAMMQKGYDEAKNRAKFYDYLEVMPKPVYAPLIERELVKSEKD
LEEIIRNMVRMGDELGKLVVATGNVHYLNPEDSTYRKILIHSQGGANPLNRSILPEVHFR
TTDEMLKEFSFLGKEMAERIVVENTHKVADLVADDITPVKTDLYTPKIEGSEDEIRKLSY
DEAHRLYGEVLPEIVEKRIEKELKSIIGNGFSVIYLISQKLVHKSVSEGYLVGSRGSVGS
SFVATMTGITEVNPMPPHYRCPECQYSEFFEDGSVGSGYDLPEKACPKCGARLFKDGHDI
PFETFLGFHGDKVPDIDLNFSGDYQAKAHDYTKVLFGEDYVFRAGTIGTVADRTAYGFVK
GYERDMNLNFRAAEVDRLAKGSTGVKRTTGQHPGGIIVIPDYMDVYDFTPIQFPADAQDS
EWKTTHFDFHSIHDNVLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPDVMQIFGGTEI
LGVTPKQIESNTGTLGIPEFGTRFVRGMLEQTKPTTFAELLQISGLSHGTDVWLGNAEEL
IRTKDIPLSQVIGCRDDIMVYLIHNGLDDGLAFKIMESVRKGKGIPEDWQKSMRDEKIPT
WYIDSCLKIKYMFPKAHAAAYVLMALRVAYYKVHFPILYYAAFLSVRAADFDLVAMSQGK
EALKAKMKEINDKGLDASTKEKNLLTILEICNEMVERGFEIKMIDLYKSDANDFIIEGNA
LIAPFRAVPSLGANVAKQICIAREEKKFLSKEDLAKRGKVSKTLIEYMTENNVLKDLPDE
NQLSLFDMM
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaagtcaagaagaattatttcaaaaattattggagcaaattaatttgcatcaa
gaattagactaccaaccttattttgaaaaagcgagtatacgtaaagtaacagtgcataaa
cagtcaaagttatggcattttgatttttattttcaagatattttgccatttgaaatctac
caaaatttttcagagaaattgcagattgcttttcgttcgatagccgcaatttctttttct
attgaaaccgaaaatccagaattaacgattgaaaaattagaacattattggccagaagcg
gttaagcgtagtggtgtttcttcaccaattatcaatcaactatttcgccaacagttacct
gttctgaatctaaaaaaagtgcaactttatgttgaaaatgaagtagttaaaggtcatttg
acgaatcagtacctgcctccagttgaagagcactatcaaaaactcggttttcctaaattt
aggattgaacctgtgattgatgaagaagcgaatactgcgaaattggctgaatttaaagct
aaaaaagaagaagccgagcaacttttagctgaacgtgcagcggataatttacaaaaagct
gaagaagaaagaaaacgtaatggcggtgacaataaagttgccaatcttccaaaaggaaaa
ttagtcttaggaagagcaatcaatgataaagaagaaattaagccaatggctgaaattatt
gaagaagaacgtcgtgtgacaattgaaggatatgtctttgatgtagaagtgcgagtattg
cgttccgaacgccaaatcttaattttaaaaattacggactacacttcatcttttgcggtt
aaaatgttttcgaattcgccagaagatgaggctgtctttgcagctttgaaaaaaggcatg
tgggttcgagctagaggagccgtacaagaagataactttatgcgtgatttagtaatgagc
gcacgagatatcaccgaagtcagtcgagagttaagaaaagataaagctgatgaagataaa
aaacgagttgaactccatttgcacagcaatatgagccaaatggatgcaacaaacaatatt
accgatttagttgaacaagcagctaaatggggacatccagcagtagctattacagatcat
agtggcgcacaatcttttccagatgcttatcatgccgggaagaaaaatggggttaagatt
ttatatggtattgaagcgaatattgtcgatgatggtgttccaattgcctataatccaaaa
catattgccttaagcgaagcaacctatgttgtttttgatgtggagacaaccggtctttcg
gcagtctatgatacgattattgaattggctgcagtaaaaatgtataaaggcaatattatt
gaaacttttgaacagtttattgatccaggtcacccgttgtcccaaacaaccattaattta
acaggaattactgatgatatggttcgtggctcaaaatctgaagaagaagttttacgcctg
tttaaagagttttctggtgatgatattttagtagcccataatgctagttttgatatggga
ttcttaaatacaagctatggcaaatatgacatagcagaagccgaaaacccagttattgat
acgttagaaatgtcacgtttcttacatccgcaattaaaaagtcatcgtttaaatacgtta
gcaaaacgctatggtgtaaatttagaacagcatcacagagccatttatgattcggaatca
acgggtcaattatgctggatatttattaaagaagctagagaagaacatgatatgcattat
catgatgaattaaatatgcacattggtgaaggggattcctataaacgagcgcgacctttc
cacgccactattatagcgacaacccaagacggattgaaaaatttattcaaacttgtttcg
atgtcaatggtcaattatttttatcggacaccacgaattccaaggtcaaaactaactgaa
tatcgtgaaggacttattgttggatctgcatgtagctcaggcgaagtttttgaagcaatg
atgcagaaaggctacgatgaagcaaaaaatcgtgccaaattttatgactatttagaagtc
atgcctaaaccagtctatgcaccattaattgagcgtgaactagtaaaaagtgaaaaagat
ttagaagaaattattcgaaatatggtacgaatgggtgatgaattaggtaagttagtagtg
gcaactggaaatgttcattatttaaatccagaagactccacttatcgcaagattttgatt
cattctcaaggtggtgctaatccgcttaatcgtagtattttgccagaagttcattttagg
acaactgatgagatgctaaaagaatttagctttttagggaaagaaatggctgagcgaatc
gtcgtggaaaacacgcacaaagttgcagatttagtcgcagatgatattacgccagttaaa
acagatttatatacacctaaaattgaaggttctgaagatgaaattagaaaattaagttat
gatgaagctcatcgattatatggcgaagtgcttcccgaaatagttgaaaaacggattgaa
aaagaattaaaaagtattattggaaatggtttctccgtaatttatttaatttcccaaaaa
ctagtacacaaaagtgtcagcgagggctatttggttgggtcacgtggttccgttgggtcc
agttttgttgcaacaatgacgggaattaccgaagtaaatccaatgccacctcattatcgt
tgtccagaatgtcaatattctgagtttttcgaagatggctccgttggttcaggatatgac
ttgccagaaaaagcttgtccaaaatgtggtgctcgtttgtttaaagacggtcatgatatt
ccctttgaaaccttcttaggatttcacggcgataaagtccccgatattgatttaaacttt
tcgggtgattatcaagctaaagcccatgattataccaaagttttatttggtgaagattat
gtgttccgggctggtacaattggaacggttgccgatcgaaccgcctatggttttgtaaaa
ggctatgaacgagatatgaatttaaatttccgagcagctgaagttgatcgcttagctaaa
ggctcaacaggcgtgaaacgaacaactggacagcatcctgggggaattattgttattcct
gattatatggatgtctatgatttcacaccgattcaatttccggcagatgcccaagattct
gagtggaaaacaacacattttgatttccattccattcacgataatgttttaaaacttgat
attctaggtcacgatgatccaactgtgattcggatgctacaagatttatcagggatcgat
ccaaaaacgattccaacagacgatccggatgtaatgcaaatttttggtgggactgaaatc
ttaggtgtgactcctaagcaaattgaatcaaatactggaacgcttggcattcctgagttt
ggaacaagatttgttcgagggatgttggaacaaacgaagccaactacctttgcagagtta
ctccaaatctctgggttatcacatggtaccgatgtttggttagggaatgccgaagagcta
atccgaacaaaagatattccgctttctcaagtaattggttgtcgggatgatattatggtc
tacttgattcataatggtttagatgatggattagcctttaaaatcatggaaagtgtgcgt
aaaggtaaaggaattccagaagattggcaaaaatcaatgcgagatgaaaaaataccaact
tggtatattgattcttgcttgaaaattaagtatatgttccctaaagcccatgcggcagca
tacgttctaatggctttgcgagtggcatattataaagtccatttcccaattctttactat
gcagcgtttctatcagttcgtgcagctgattttgatttagtcgcaatgagccaaggaaaa
gaagcgttaaaagctaaaatgaaagaaataaatgataagggccttgatgcctcaaccaaa
gaaaagaatttactaacaatactagaaatttgtaatgaaatggttgaacgtggctttgaa
attaaaatgattgatctatataaatcagatgcaaatgattttattatcgaaggcaacgct
ttaattgctcctttcagagcagtaccaagtttgggagccaatgtggcgaagcaaatttgt
attgcccgtgaagagaagaaattcttatctaaagaagatttagcgaagcgtggtaaagtt
tctaaaacattgattgagtatatgactgagaacaatgttttgaaagacttaccagatgaa
aatcaattatctttatttgatatgatgtaa
DBGET
integrated database retrieval system
