Carnobacterium maltaromaticum: BN424_2093
Help
Entry
BN424_2093 CDS
T02342
Symbol
ymdA
Name
(GenBank) uncharacterized HDIG domain protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cml
Carnobacterium maltaromaticum
Pathway
cml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN424_2093 (ymdA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cml03019
]
BN424_2093 (ymdA)
Messenger RNA biogenesis [BR:
cml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BN424_2093 (ymdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
CCO11534
UniProt:
K8E4V9
LinkDB
All DBs
Position
complement(2116840..2118405)
Genome browser
AA seq
521 aa
AA seq
DB search
MNTIIISVAFAIVALVVGLIVGYIVRKSTHEKELAGARNTATGILEEAKREAETLKKEAL
LEAKDENHRYRTEIESELKERRSDILKQENRLVQREENLDRKDDGLEKRERTLEAKEEKL
SSRQQLIDDQEQKVTALVEEQQLELERVAALSRDEAKDMIMKETEEDLSHELAVMVKESE
QKAKEEADRKAKNLISLAIQRCAADQVSETTVSVVTLPSDEMKGRIIGREGRNIRTLETL
TGIDLIIDDTPEAVILSGFDPIRREIARMTLEKLIQDGRIHPARIEEMVEKSRKEMDERI
REIGEQATFDVGVHSLHPDLIKILGRLRFRTSYGQNVLNHSIEVAKLAGILAAELGEDVT
LAKRAGLLHDIGKALDHEIEGSHVEIGEEIAIKYKENATVINAIASHHGDTEATSVISVL
VAAADALSAARPGARSESLENYIRRLEKLEGISNSFTGVERSFAIQAGREVRIMVQPEII
DDLTAITLARDIRKRIEDELDYPGHIKVTVIRETRAVDYAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaatactattattatcagtgtagccttcgctattgttgctttagttgttggtctaatt
gtaggatatatcgtccgaaaatcaacccacgaaaaagaactggctggtgctagaaacact
gcaactggaattttggaggaagcaaaaagagaagcagaaaccttaaaaaaagaagctttg
ttagaagcgaaggatgaaaaccacagatatcgaactgaaattgagagtgagctaaaagag
cgcagaagcgatattttaaaacaagaaaatcggttggtccaacgtgaagaaaacttagat
cgtaaagacgatggattagaaaaacgtgaacgtactcttgaagcaaaagaagaaaaatta
agttcaagacaacaactaattgacgatcaagagcaaaaggtaacggcattagttgaagag
caacaacttgaattagaacgggtagccgctctttcacgagatgaagcgaaagacatgatt
atgaaagaaacagaagaagatctctcccacgaactagcagttatggtgaaagaatctgaa
cagaaagcaaaagaagaagcagatcgaaaagcgaaaaatttaatttcattagcgattcaa
cgttgtgcggctgatcaagtttctgaaacaacggtatccgttgtaacgctaccaagtgat
gaaatgaaaggtcgaattattggacgcgaaggtcgaaatattcgtactttagagacttta
acaggaattgatttgattatcgatgatacacctgaagcagttattttaagcgggtttgat
ccaattcgtcgcgaaattgcacgaatgacacttgaaaaactgattcaagatggacgaatt
catccagctcgaatagaagaaatggttgaaaaatcaagaaaagaaatggatgaacgcatt
cgtgaaattggtgaacaagctacgtttgatgtaggagtccactcattacatccagattta
attaagattttaggacgtttacgttttagaacaagttatggtcaaaatgtgttaaatcat
tctattgaagtagctaaattagctggtattttagcagctgaattaggtgaagatgttact
ttagctaaacgcgctggattacttcacgatattgggaaagcattagatcatgaaattgaa
ggttctcatgtcgaaattggagaagaaattgccattaaatacaaagaaaatgctaccgta
attaatgcgattgcttctcatcatggagacacggaagctacttctgttatttctgtccta
gttgctgcagccgatgcactatctgctgctagaccaggcgcacgaagcgaatctttagaa
aattatattcgccgtctagaaaaactagaaggaatttcgaatagctttactggtgttgaa
cgcagttttgctatccaagcaggacgtgaagttcggattatggtacaaccagaaattatt
gatgacttaacggcaatcacactagcacgagatattcgtaaacgaattgaagatgaactg
gattacccaggacatattaaagtgacagttattcgtgagacccgagcggttgactacgcg
aaataa
DBGET
integrated database retrieval system
