Carnobacterium maltaromaticum: BN424_2846
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Entry
BN424_2846 CDS
T02342
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cml
Carnobacterium maltaromaticum
Pathway
cml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN424_2846 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cml03021
]
BN424_2846 (rho)
03019 Messenger RNA biogenesis [BR:
cml03019
]
BN424_2846 (rho)
Transcription machinery [BR:
cml03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BN424_2846 (rho)
Messenger RNA biogenesis [BR:
cml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BN424_2846 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
Mor
ATPase_2
AAA_22
NACHT
Motif
Other DBs
NCBI-ProteinID:
CCO12268
UniProt:
K8EK67
LinkDB
All DBs
Position
complement(2842504..2843799)
Genome browser
AA seq
431 aa
AA seq
DB search
MGDLLTLAELEKKTLKELYTFAKDFKIPYYSQMNKKELSLAVLRAQEEKQGFFVAEGVLD
IVSQEGFGFLRPINYTPSQEDIYISVSQIRRFGLRNGDKITGKARPPKPSERYYGLMHVN
EVNGKNPEEAKERSHFPALTALYPERQMKLETEQVKISNRMIDILAPVGFGQRGLIVAPP
KAGKTILLKEIANGITKNYPDAELIILLIDERPEEVTDIERSVKGDVVSSTFDQQPENHV
RVTELVLERAMRLVEDKRDVIILMDSITRLARAYNLVVPPSGRTLSGGIDPAAFYRPKRF
FGAARNIEEGGSLTILATALVDTGSRMDDIIYEEFKGTGNSELHLSRELSERRIFPAIDI
KKSSTRKEELLMPGERLEEIWKLRRLMTGDSLEFTDKFIKILRKTKTNADFFASFSEEAF
GKGRTNRTIRK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatttactaacgctagcagaactagaaaaaaagacattaaaagaactttataca
tttgctaaagactttaaaattccttattatagccaaatgaataaaaaagaattgtcttta
gccgttctccgtgcccaagaagagaagcaaggtttctttgttgctgaaggtgtattagat
attgtttctcaagaagggtttggctttttacgcccaattaattatactccgagtcaggaa
gatatttatatctcagtgtcacaaattagacgttttggtctaagaaatggggataaaatt
accggtaaagctagaccacctaagccttccgaacgttattacgggttgatgcatgtcaat
gaggtcaacgggaaaaatcctgaagaagccaaagagcgctcacattttccagccttaacg
gcactttacccagaacgtcaaatgaaattagaaacagaacaggttaaaatttcgaatcga
atgattgatattttagcaccagttggttttggacaacgtggtttaattgtggctccacca
aaagctgggaaaacaattttattaaaagaaattgcgaatggcatcacaaaaaactatcca
gatgcagaattaattattttattaattgatgaacgcccagaagaagtaacggatattgag
cgaagtgtcaaaggcgatgtagtttcatcgacttttgatcagcaacccgaaaaccatgtt
cgtgtaacagaacttgttttagagcgtgctatgcgcttagtcgaagacaaacgggatgtt
attattttaatggacagtatcacccgcttagctcgggcctataatttagttgttccgcca
agtggacgaacgttaagtggtgggattgatccagcagccttttatcgaccaaaacgcttt
ttcggtgcagctcgtaatattgaagaaggcggtagtttaaccattttagcaacggcctta
gtcgatacaggtagccgtatggatgacattatttatgaagaatttaaggggactgggaac
tccgagttgcatctttcacgagaactttctgagcgccgtattttccctgctattgatatt
aaaaaatcaagtacacgtaaagaagaattgctaatgccaggtgaacgattagaagagatt
tggaagttacgtcgtttaatgacaggcgattcattagagtttacagacaaatttattaag
attttacgtaaaaccaaaacgaatgctgatttttttgctagttttagcgaagaagccttc
ggtaaagggcgaaccaatcgaacaatccgaaaataa
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