Carnobacterium maltaromaticum: BN424_3412
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Entry
BN424_3412 CDS
T02342
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cml
Carnobacterium maltaromaticum
Pathway
cml03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cml00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BN424_3412 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cml03021
]
BN424_3412 (rpoA)
03400 DNA repair and recombination proteins [BR:
cml03400
]
BN424_3412 (rpoA)
Enzymes [BR:
cml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BN424_3412 (rpoA)
Transcription machinery [BR:
cml03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BN424_3412 (rpoA)
DNA repair and recombination proteins [BR:
cml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BN424_3412 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF961
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CCO12833
UniProt:
K8ELN8
LinkDB
All DBs
Position
complement(3407664..3408608)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPRINTIEISDDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTTIQIDG
VLHEFSTIDGVVEDVTSIILNIKKLALKLYSGEDKTIEIDVKGPAVVTAADITYDSDVEI
LNPDLYICTVAEGARFHVRLTAKQGRGYARAEHNKHDDMPIGVLPVDSIYTPVSRVNYQV
ENTRVGQKDNFDKLTLDVWADGSISPEDAVSLAAKILTEHLDIFVNLSDEARKVEIMVEK
EETHKEKMLEMTIEELDLSVRSYNCLKRAGINSVQELTDKSEAEMIKVRNLGRKSLEEVK
FKLAELSLGLRQDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgaaaaaccaagaattaatacgattgagatcagcgatgatgccaaattt
ggtaaattcgttgtagagccacttgaacgcggttatggtactacgttagggaattctcta
cgtcgtattttgttgtcttctcttccaggagcagcagtaactactattcaaatcgatggt
gtgttacacgaattttcaacaatcgatggggttgtagaagatgtgacatcaatcattttg
aatattaaaaaacttgcactcaagttatattctggtgaagataaaacgattgaaatcgat
gtgaaaggtccagcggtagttacagcagccgatatcacttatgatagcgatgttgaaatc
ttaaaccctgacttatacatttgtaccgtagctgaaggcgcacgtttccacgtacgttta
actgcgaaacaaggtagaggttatgcaagagctgaacataataaacacgatgatatgcca
attggcgtattaccagtcgactcgatttacaccccagttagtcgtgtgaactatcaagta
gaaaatactcgagtgggtcaaaaagataattttgataaattaacacttgatgtatgggca
gatggttctattagcccagaagacgctgtgagtttagcagcaaaaattttaacagagcat
ttagatatcttcgtaaatctatctgacgaagctcgtaaagtggaaatcatggtagaaaaa
gaagagactcataaagaaaaaatgcttgagatgacaattgaagaattggatctatctgta
cgttcatacaattgtttgaaacgtgctggtattaattcagttcaagaattgactgataaa
tctgaagcagaaatgattaaagtacgtaatctaggtcgtaagtcacttgaagaagtgaaa
tttaaactagctgagctaagtttaggtttacgtcaagacgattag
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