Carnobacterium maltaromaticum: BN424_3502
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Entry
BN424_3502 CDS
T02342
Name
(GenBank) HAMP domain protein
KO
K18986
two-component system, OmpR family, sensor kinase Ihk [EC:
2.7.13.3
]
Organism
cml
Carnobacterium maltaromaticum
Pathway
cml02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cml00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BN424_3502
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cml01001
]
BN424_3502
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cml02022
]
BN424_3502
Enzymes [BR:
cml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
BN424_3502
Protein kinases [BR:
cml01001
]
Histidine kinases
OmpR family
BN424_3502
Two-component system [BR:
cml02022
]
OmpR family
Ihk-Irr (virulence regulation)
BN424_3502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
Sigma_reg_N
DUF3659
DUF6693
HAMP
Motif
Other DBs
NCBI-ProteinID:
CCO12922
UniProt:
K8E7L1
LinkDB
All DBs
Position
complement(3486112..3487557)
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AA seq
481 aa
AA seq
DB search
MRIRTKNFLFTSGIIIIVVTLAFGLLYWIMPGYYQQKKESELSKIMEDVAKQIEGKTISE
TTEILDKTGLETGAVWTLINGEDQLIYPDGQLLSVTQAVNTNEVVVRDDSSFGNVTESGA
AQPLITAMNIQTNDLGNWGDVIQKYKYFVDNEGQVYKLNAIRTLQPIDEAKGVLLDIYPW
ILAVSFLIGGIGAFIYSYYSTKRIYQLSMITKQMTEMNETTRCPVVGKDEVSTLATDINY
LYGNLLTTIEQLNQEIELTAEIERSKAEFMRIASHELKTPITAMSGIVEGMLYNVGEFKD
RDHYLAICKEILATQSQLVKDILYISRLEMIEGASEREIFSVSELVEKEVLPVFELMAKT
KKYKLETKIEPVQIEGVREDLKRVLMNLLSNALQYTSENGRIVVTLNEAGFALENECEPL
TSDDLSKVFAAFYRPDYARARKDGGTGLGLYIVGQLLERDHLTYSFEPTKQKNGMVFKIK
W
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcagaacgaaaaattttctcttcacgtcgggaattattattattgttgtgaca
ttagcttttggtttgctttattggattatgcccggatattatcagcaaaaaaaagaatcg
gaactatctaaaattatggaggatgttgctaaacagattgaaggcaaaacaattagtgag
actactgaaattttagataagacaggcttggaaactggagcagtatggaccttgataaac
ggagaggaccaattgatttatccagatggtcaactattaagtgtcactcaagctgtgaat
accaatgaagtagtcgttagagatgattctagttttgggaatgtaactgaaagtggagca
gctcaacccttaatcactgctatgaacattcaaacgaatgatctgggaaattggggggat
gttattcagaagtataaatactttgttgataatgaaggacaagtttataagttaaatgcg
attcgaactctccaaccaattgatgaagcaaaaggcgtattactcgatatttatccttgg
attttggctgtaagttttttaattggcggaatcggagcgtttatctattcctattactcc
acaaagcggatttatcagttatcgatgattacaaaacaaatgactgaaatgaatgaaaca
actcgttgtccagtagttgggaaagatgaagtcagcacattggcaaccgatattaattat
ctttatggcaacttactgacaacaattgaacaattgaaccaagaaattgagttaactgct
gagattgagcgctctaaagctgaatttatgcggattgcttctcatgaattaaaaacaccg
attacggcaatgtcaggcattgttgagggaatgctatataatgtgggggaatttaaagat
cgcgatcattatctagctatttgcaaagagattttagctactcaaagccagttagtgaag
gatatattatatatatcacgacttgaaatgattgaaggagcaagtgaaagagagatattt
tcagtttctgaattagttgaaaaagaagttttaccagtttttgaactgatggcaaaaaca
aaaaaatacaagctggagactaagatagaaccagtccagattgaaggcgttcgtgaagat
ttgaagagagtacttatgaatctgcttagtaatgctttacaatatacttcagaaaatggt
cggattgttgttaccttaaatgaagctggcttcgcattagaaaatgaatgtgaaccactg
acgtcggatgatttgagtaaagtctttgccgctttttatcgcccagattatgcgcgagct
agaaaagacggtgggacgggtttaggcctgtatattgttggacaattactagaacgggat
cacttaacttattcttttgagccaacaaaacaaaaaaatggtatggtttttaaaattaag
tggtaa
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