Chlamydia muridarum Nigg3 clone G0.1.1: NC80_03915
Help
Entry
NC80_03915 CDS
T03404
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cmm
Chlamydia muridarum Nigg3 clone G0.1.1
Pathway
cmm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NC80_03915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmm03021
]
NC80_03915
03019 Messenger RNA biogenesis [BR:
cmm03019
]
NC80_03915
Transcription machinery [BR:
cmm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NC80_03915
Messenger RNA biogenesis [BR:
cmm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NC80_03915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
S1CSD-TOTE-2
AAA_22
OB_RNB
Mor
AAA
nSTAND_NTPase5
NACHT
DUF5855
Motif
Other DBs
NCBI-ProteinID:
AIT90932
UniProt:
A0A097KIC0
LinkDB
All DBs
Position
complement(919010..920404)
Genome browser
AA seq
464 aa
AA seq
DB search
MKEESPAEVLHKVKEHKRREGPLPLGKEGSEDSAVATEEKEAPRPVAVTKIAKLQRMGIN
ELNVLARQYGVKNVGSLTKSQVVFEIVKAKSERPDEFLIGEGVLEVLPDGFGFLRSPTYN
YLPSAEDIYVSPAQIRRFDLKKGDTIVGTIRSPKEKEKYFALLKVDKINGSTPDKAKERV
LFENLTPLHPNERLIMEMGKENLAERVLDLTAPIGKGQRGLIVAPPRSGKTVILQSIAHA
IAVNNPDAELIVLLIDERPEEVTDMIRQVRGEVVASTFDEQPDRHIQVAEMVIEKARRLV
EHGKDVVILLDSITRLARAYNTVQPHSGKILTGGVDASALHKPKRFFGAARNIEGGGSLT
ILATALIDTGSRMDEVIFEEFKGTGNMELVLDRHLSDRRIYPAIDLIKSGTRKEELLYHP
GELEKVRLFRQAIAGLTAIDAMQLLLGRLKKTNSNTEFLLSLKD
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagaaagtccagccgaggtcttacacaaggtaaaggagcataagaggcgcgag
ggtcctttaccattgggaaaagaaggtagtgaagacagtgctgttgctacagaagagaaa
gaggccccgcggccagtggcagtgacaaagattgctaaactacaacgcatgggcattaat
gagctgaatgttttagcgcggcaatatggggtgaagaatgtaggttccctgacgaaatcg
caggtagtgttcgaaatcgttaaagctaagtctgaacgtcctgatgagtttttgattggt
gagggagttttagaagttctcccagatggctttgggtttctgagatctcctacatacaac
tatcttccttctgcagaggatatttatgtttctccagcgcagattcgtcgttttgatttg
aagaaaggagatactatcgttggaacgatccgttctcctaaggagaaagagaagtatttt
gctttattgaaagtagataaaatcaacggttcgactcccgataaagcgaaagaaagagtt
ttatttgagaacttaaccccactgcatcctaatgagcggttaatcatggagatggggaaa
gaaaacctggcggagcgtgtattggatttaacagctccaattggtaagggacaacgaggg
ctgattgtggctccgcctcgttccgggaaaacagtgattttgcagagtattgcgcacgcc
attgctgtaaataatcctgatgcagagctcattgtattactgattgatgagcgtcctgaa
gaagttactgatatgattcgtcaggttcgaggtgaagttgttgcatcgacttttgatgaa
cagcctgatcgacatattcaagttgctgaaatggtaattgaaaaggcaagacgtttagtt
gagcacggtaaagatgttgtgattttactagattctattacgcgtttagctcgtgcatat
aacactgtgcaaccacattcaggaaaaatcctcactggaggggtagatgccagtgcctta
cataaacctaagcgtttctttggtgcggctagaaatattgaaggtggtgggtctctaacg
attttagccacagcgttaattgatacggggtcaagaatggatgaggtgatctttgaggaa
ttcaaaggaaccggaaacatggaattagttcttgatcggcacctttctgatcgtagaatt
tatcctgctattgatttgattaagagcggaacacgaaaagaagaattgctataccatcca
ggagagttagagaaagtgcggctgttccggcaggctatagctggcttaacagcaatagat
gcaatgcagttgcttcttggtcggttgaaaaagacaaatagcaacacagagtttctattg
tcattaaaggattaa
DBGET
integrated database retrieval system
