Cucumis melo (muskmelon): 103482597
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Entry
103482597 CDS
T03195
Name
(RefSeq) DNA mismatch repair protein MSH4
KO
K08740
DNA mismatch repair protein MSH4
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmo03036
]
103482597
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Meiosis-specific proteins
Others
103482597
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_22
AAA_27
Motif
Other DBs
NCBI-GeneID:
103482597
NCBI-ProteinID:
XP_008437055
UniProt:
A0A1S3ATN6
A0A9I9CLV1
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All DBs
Position
9:complement(22184281..22193607)
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AA seq
789 aa
AA seq
DB search
MEDERSSFVVGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPMVIL
VSPNKLAPDGMVGVSVLADRFFATVKKVVMARSCFDDTKGAVLIKNLAAKEPSALGLETY
YKQYYLCLAAAAASIKWIEAEKGVIVTNHSLLVTFNGSSDHVSIDATSVQNLEIIEPLHS
NLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQLFF
GLSQALRKFPKETDRVLCHFCFKQKKVTNEVLHPGDAKKSQNLISSIILLKTALEALPLL
SKILKEAKSFLLANIYKSVCENEKYANIRKRIGEVIDEDVLHARVPFIARTQQCFAVKAG
IDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQGKLPN
KFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYLRTEICLEGLVDAIREDVSMLTLLAE
VLCLLDMIVNSFAHTISTKPVDRYTRPNFTENGPMAIEAARHPILESIHNDFVANSIFLS
EASNMIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDDSLE
SNSSTFMTEMKETAFVMQNVSRRSLVVVDELGRSTSSSDGFAIAWSCCEHLLTLKAYTIF
ATHMEGLSEVATIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGLPSS
VIETARDITSRIKEKEERRMEINYLQYHPIRMAYNVAQRLICLKYSSHDEDSIREALQNL
KEGYISGRL
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgagagatcgagcttcgtggtcggtctgatcgagaacagagccaaggaggtt
ggagttgctgcgtttgacttgagatcagcttcacttcatctttctcaatatatagagacc
agcagctcctaccagaatacaaaaactttgctgcatttttatgatccaatggtcatactt
gtttctccaaacaagctcgcgcctgatggcatggttggagtttctgttttggctgataga
ttttttgctacagtgaagaaggttgtgatggcacgttcttgctttgacgacacaaagggt
gccgttctgattaagaatctggcagccaaggagccttctgctcttggtttagaaacttat
tacaaacagtactatctctgcctggctgctgctgctgctagcattaagtggattgaagca
gagaagggggtaattgtgaccaatcattctttattggtcaccttcaatggctcatctgat
catgtaagcattgatgcaacgagcgttcagaatttagaaattatcgagccactacactcc
aatctttggggaacaagcaacaagaagagaagtctgtataacatgctcaaaacaacaaaa
actataggagggtctagacttcttcgtgccaatcttttgcagccattaaaagatatcgaa
accattaatgcccgtctagattgcctggatgaattgatgagcaatgaacaattgttcttt
gggctttctcaagctctacgtaaatttcctaaagagactgacagagtactttgtcacttc
tgcttcaagcaaaagaaagttacaaatgaagttttgcatcctggtgatgctaaaaagagc
caaaatttgatatctagcattattctgctaaaaactgccctagaggcattgcctttactc
tcaaagatacttaaggaagcaaagagttttctgcttgcaaacatttacaaatctgtttgt
gaaaacgaaaaatatgcaaacattagaaagaggattggagaagtgatcgatgaagacgtt
cttcatgcaagagttccttttattgcccgcactcaacaatgttttgcagttaaggctgga
attgatggactgttggatattgcaagaaggacgttctgtgatactagtgaagctatacat
aatcttgctaacaaatatcgagaggagtacaagttgcccaacttaaaactgccatttaat
aataggcaagggttttacttgagcattcctcataaagatgtacaaggaaagcttcctaac
aagtttattcaggtcttgaagcacgggaacaacatacgatgctctaccctggaacttgct
tctctgaatgttagaaacaagtctgctgcaggagaatgctatctacgaacagaaatttgc
ctggaaggactggtggatgccataagagaggacgtctctatgctaacactgctcgcagaa
gtcttgtgtctcttagatatgattgtcaattcatttgcacatacaatatcaacaaagcct
gttgatcgatatactaggccaaactttacagagaatggcccgatggcaattgaagctgct
agacacccaatcctagaaagtatacacaatgatttcgttgctaatagcatatttctatct
gaagcatccaacatgataatcgtcatgggtccaaatatgagtggaaagagtacctatctt
caacaaatgtgccttcttgttattcttgctcaaattggatgttatgttccagcacatttc
tcaacattgagagttgttgatcgcatattcacacgaatgggcacagatgatagtctagag
tccaactccagcacattcatgacagagatgaaggaaacggcttttgttatgcagaatgtc
tcccgaaggagtctcgttgtcgtggatgaacttgggaggtcaacttcttcctctgatgga
tttgcaattgcatggagctgctgcgaacatcttttgacactgaaagcgtataccatattt
gccactcatatggagggcctatcagaggtggcaaccatctatccaaacgtaaaaattctt
cacttccatgtggatataaggaataaccgtttggatttcaagtttcaactaaaggacgga
ataagacatgttccacactatggccttttattagcagaagtggcaggattgcctagctcg
gttatcgaaactgcaagagacattacttcgaggatcaaggagaaggaagaaagacggatg
gagataaactacttgcagtaccatccgatcagaatggcttataatgtagctcagcgtctg
atatgcttgaaatactccagccacgatgaagattcaatacgagaagcattacaaaatctt
aaagagggctacattagtggcaggctctga
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