Cucumis melo (muskmelon): 103483084
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Entry
103483084 CDS
T03195
Name
(RefSeq) serine/arginine-rich splicing factor SR34A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103483084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmo03041
]
103483084
Spliceosome [BR:
cmo03041
]
Common components
Common spliceosomal components
SR proteins
103483084
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
103483084
NCBI-ProteinID:
XP_050945965
LinkDB
All DBs
Position
9:complement(25198286..25209211)
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AA seq
276 aa
AA seq
DB search
MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAED
AIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGGGGGGGGGGGGGGGGRFGVSK
RSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRK
LDDTEFRNPWARAYIRVKKYDGSPTRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRS
VSRSVSRSRSPSPVKSSRPRSKSRSGSPRQAREESG
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcgtttttctcgcacaatatatgttggaaacttgccttcagacataaaagag
tatgaaattgaagatttgttctacaagtatggccgaattttggatattgaattgaagatt
ccaccacgccctccatgttattgttttgtggagtttgagagtgttagggatgcagaagat
gcaatcagagctcgtgatggatataactttgatggttgtcgtctaagggttgagcttgca
catggtggtagaggcccttcatctagtgatcgtcgtagtagttatggtggtggtggtgga
ggaggaggaggaggaggaggaggagggggaggggggggaggacgttttggtgtttcaaaa
cgatcagaatatcgagttattgtacgtggtcttccgtcttctgcttcttggcaggatttg
aaggatcatatgcgtaaggcgggggatgtgtgttttgctgaagtttcacgtgatagcgaa
gggacgtttgggatcgttgattatactaactacgatgacatgaaatatgctatacgaaaa
cttgatgatactgaattcagaaatccttgggcgagagcatacattcgggtgaagaagtat
gatggaagtcccactaggagcaggagcaggagccggagccggagccggagccggagcaga
agccgtagccgaagccggactgctagacgaaataggagcaaatcagcagaacgacgatct
gtctctagatcagtttcaagatcgagatctccatctcctgttaaatcttcaaggccacgg
tcaaaatcaagatctggatcaccacgtcaggcacgagaagaaagcgggtga
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