Cucumis melo (muskmelon): 103483265
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Entry
103483265 CDS
T03195
Name
(RefSeq) ATP-dependent helicase BRM
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103483265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmo03021
]
103483265
03036 Chromosome and associated proteins [BR:
cmo03036
]
103483265
Transcription machinery [BR:
cmo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103483265
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
103483265
Chromatin remodeling factors
BAF complex
103483265
PBAF complex
103483265
GBAF(ncBAF) complex
103483265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
QLQ
HDA2-3
Bromodomain
AAA_14
Motif
Other DBs
NCBI-GeneID:
103483265
NCBI-ProteinID:
XP_008438031
UniProt:
A0A1S3AVI0
LinkDB
All DBs
Position
6:complement(1301199..1313889)
Genome browser
AA seq
2248 aa
AA seq
DB search
MQSGGGGPLRNPGFPAGRAASTTSAAASPSSSSSAVSTPHLGFDSMQQQQQQLASRQSLQ
HQLLRKSDGNEALLSYQAGGLQGVLVGNNFPQSPGSSHLPQQARKFIDLAQQHHGTSQEG
QNRSQGLEQQALNHPMHQAYLQYALAAQQKSAMAMQSQHQAKMGIMSPQSIKDQEMRMGN
QKIQELIPTQVSNQASTSLSKKSSDHFVRGEKQMEQGQPSTSDQRVDSKSSSQLPSMGNL
MPVNMTRPMQAPQGQPGILNMANNQLGMAQLQAVQAWALERNIDLSLPSNVNIVSQLFPM
LQPRMVVPHQKANENNMGPQSSPASVPKQQINSLFAGKEASTHTNSLSDVSGQSSSTKAR
QIASTNPFGQNMNASVVNNTSHASMQQFSVPGMENQLSSRLPVSGNTIPPVHSSESSGNV
NQNIERPLQGKTSLGTPENVQTQYVRQVNRSSPQTALPTSDGGSSNSTLPQGVHSNQTAQ
QRFGFTKHQLHVLKAQILAFRRLKKGEGTLPQELLRAIAPPPLDVQQQQQFLPPGSTSQD
KSSGKTVEDTGNVEATEKDSLSLASSNGHRFPREEVSTGDEKSKTSTSDVQPMPPTMKET
VPVASSGKEEQQTTVSVKSDQETDRGCQKPPGKTDFPVERGKAIANQAAVPDVTQAKKPA
PPSTPQSKDVGAARKYHGPLFDFPYFTRKHDSFGSAMAVNNNNNLTLAYDVKDLLFEEGL
EVINKKRTENLKKIGGLLAVNLERKRIRPDLVVRLQIEEKKLRLLDLQARLRDEIDQQQQ
EIMAMPDRPYRKFVRLCERQRMELTRQVQASQKAMREKQLKSVFQWRKKLLEAHWAIRDA
RTARNRGVAKYHERMLREFSKRKDDDRNRRMEALKNNDVERYREMLLEQQTSMPGDAAER
YSVLSSFLTQTEEYLHKLGSKITAAKSQQEVAEAANIAAAAARLQGLSEEEVRAAAACAG
EEVMIRNRFMEMNAPKDSSYVNKYYNLAHAVNERIVRQPSMLRAGTLRDYQLVGLQWMLS
LYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLP
SVSCIYYVGGKDERSKLFSQEVCALKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRM
KDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSKPF
QKEGPTPNAEDDWLETEKKIIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSA
FQSAVYDWIKATGTLRVDPEDEKLRVQKNPNYQPKVYKTLNNRCMELRKTCNHPLLNYPY
YGDFSKDFLVRSCGKLWILDRILIKLQKTGHRVLLFSTMTKLLDILEEYLQWRRLIYRRI
DGTTSLEDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQA
VARAHRIGQTREVKVIYMEAVVDKISSNQKEDELRSGGSGDLEDDFAGKDRYMGSIESLI
RNNIQQYKIDMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQETVHDVPSLQEVNRM
IARSEDEVELFDQMDEEFDWTEEMTRYDQIPKWLRASTREVNNAIANLSKKPSKNILFGA
GYGLESSELGSDSSLRTERKRGRPKGKKIPNYKEMDDDNGEFSEASSDERNGYSVQEEEG
EIAEFEDDEYSRGIEATQLNKDQMEDGPDCDARYDYPRDGTRNNHLLEEAGSSGSSSSSR
RLTQIVSPVSSQKFGFLSALDARPSSLSKRLPDELEEGEIAISGDSHMENQQSESWIHDR
EDGEEEQVLQPKIKRKRSLRLRPRPPAERREEKIYNETQSLQYGDSSSPSPFLADHKFSK
FKNDPEAKPYGDSNTSKHEQNESSSKTRRNLSARRVAPSSKLHSSPKSSRLNSLTGSADD
AVEHSRENWDGKQSNAGGNSGFGSKMPDIIQRRCKNVISKLQSRIDKEGHQIVPLLTDLW
KRMGNSSLPSGVSNNILDLRKIDQRIDRLEYNGVMELVFDVQFMLKGAMQFYGFSYEVRF
EAKKVHDLFFDILKIAFPDTDFREARNALSFSSPGSSAAATMRERPAGQSKRQKMMHEMD
TDSGPPHKSQHRGPVSGEETRATRGHLMAQKESRFGSGSGSKDQYQIEEPPLLTHPGELV
ICKKKRKDREKSIVKPRTGSGGPVSPPPSGARGIRSPGLSSVPKDSKQSQGWPNQPQSAN
GSGGGPVSWANPVKRLRTDAGKRRPSHI
NT seq
6747 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcgggtgggggtggccccctccggaatccggggtttccggccggacgggcggca
tcgacgacatcagctgcggcgtcgccgtcttcatcttcatcggcggtgtcaacgccgcat
ttggggtttgattcaatgcagcagcaacagcagcagctagcgtctaggcagtcgctacaa
catcaattactcagaaaatctgatggaaatgaagcccttttatcatatcaagctggtggt
ctccaaggagtcttagttgggaacaactttcctcagtcacctggttcctcacatttgcct
cagcaagcgaggaaattcattgatctagctcaacagcatcatggtacatctcaggagggc
caaaacaggagccaaggtcttgagcagcaagcactgaatcatcctatgcatcaagcttat
ctgcaatatgcattggctgctcagcagaagtctgcgatggcaatgcagtcgcaacatcag
gctaaaatgggaattatgagccctcagtctattaaagatcaggagatgcggatgggaaat
cagaaaattcaggaacttattcccactcaggtctctaatcaagcatcaacatctttgtcc
aaaaaatcatcagatcattttgtacgtggtgaaaaacaaatggagcagggacagccatca
acttctgatcagagagttgattcaaaatcttctagtcagcttccttccatgggtaatttg
atgcccgtgaatatgacacggcctatgcaggcacctcaaggtcaaccaggaattcttaac
atggcaaacaaccagcttggcatggctcagttgcaggcggtgcaagcatgggctctagaa
cgcaatattgatctttcgctaccttcaaatgtcaacattgtttcacagctttttccaatg
ctccagcctagaatggtggttccccatcaaaaagcaaatgaaaacaatatgggaccacag
tcatcacctgcttctgtccccaaacagcagatcaattctttgtttgcggggaaagaggct
tctacccatactaattcattaagtgatgtatctggacagtcaagcagcacgaaagccaga
cagattgcttcaacaaacccctttggtcaaaacatgaatgccagtgttgttaacaatact
agccatgccagcatgcagcagttcagtgttcctggcatggaaaaccagttatcttcaaga
ttaccagtttctggaaatacaatacctccagtacattcttctgaatcttctgggaatgtg
aaccaaaacattgaacgtccccttcaaggaaagacatcgctaggtaccccggagaatgtg
caaacacaatatgtcaggcaggtgaatcgatcatctccgcaaactgctcttcctactagt
gatgggggttctagcaattcaacattaccacaaggtgtacactctaatcagacagcacaa
cagcgatttggcttcaccaaacatcaattgcatgtcttaaaagcccaaattttagcattt
aggcggctaaagaaaggagaaggtacactgccgcaagaacttctaagggctattgctcct
ccacctctggatgtgcagcagcagcagcagtttctacctcctggaagtactagtcaggat
aaatcatctgggaagactgtagaagatacagggaatgtggaggctactgagaaggactcc
ttgtctcttgcatcaagtaatggacatagatttccaagagaggaagtttcaactggagac
gaaaaatcaaagacatccacttcggatgtgcaacctatgccgcctacaatgaaggaaaca
gtacctgtggcatcttccggaaaagaagagcagcagacaacagtctctgttaaatcagat
caggaaactgatcgtgggtgtcaaaagcctcctggtaaaactgattttccagttgaaagg
ggaaaggctattgcaaaccaagctgctgtaccagatgttacgcaagctaaaaaacctgcg
ccacctagtacaccccagtcaaaagatgttggcgctgctaggaagtatcatggacccctt
tttgacttcccatacttcaccaggaaacatgactcatttggttcagcgatggcagttaat
aacaataacaatttaacactggcttatgatgtaaaagatcttctttttgaggaaggtcta
gaagttatcaataagaaaaggacagaaaacttgaagaagataggtggtttgcttgctgtc
aacttagagaggaaaagaatcagacctgatttggtagtacgattgcaaattgaagaaaag
aaactccgacttttagatctacaggcacgtctgagggatgaaattgatcaacagcaacaa
gagataatggcaatgcctgataggccctataggaagtttgtacgcttatgtgagcgtcag
cgtatggagctaactcgacaagtacaagcctcgcagaaagccatgagagaaaagcaactg
aaatctgtttttcagtggcgcaaaaaacttctagaggctcattgggccatccgtgatgct
cggactgcccgcaacagaggagttgccaaatatcacgagagaatgttgagggagttctcc
aaaagaaaagatgatgataggaaccgaaggatggaagctctaaagaataatgatgtcgaa
agatatagagaaatgttgttggagcagcagacaagcatgcctggtgatgctgctgagaga
tactctgttctatcgtcatttttgactcagactgaagaatatcttcataagctaggaagc
aaaataactgctgccaagagtcagcaggaagtggcagaggccgcaaatattgctgcagct
gctgcccgattgcagggtctttcagaagaagaagttagggcagcagctgcttgtgcagga
gaggaagttatgataagaaaccgttttatggaaatgaatgctcccaaggatagttcatat
gtgaacaagtactataaccttgcccatgctgtgaacgagagaattgtgaggcaaccctca
atgttacgggctggaactttaagagactatcagcttgttgggttacaatggatgctttca
ctgtataacaataaattaaatggaatcttggcagatgagatgggtcttgggaagaccgtg
caggtaatggcattgattgcttatttgatggaatttaaagggaactatggcccccatctt
ataattgtccccaatgctgttttggtcaactggaagagtgagctccatacttggctacca
tccgtatcgtgcatttattatgttggtgggaaggatgagcggtcaaaattattttcacag
gaggtttgtgccttgaaatttaatgttctcgtgacaacttatgagtttatcatgtatgat
cgctcaaagctttcaaaaattgattggaagtatattataattgatgaagcacaaagaatg
aaggacagggaatcggttttagctcgtgaccttgataggtacagatgtcagaggcgcctg
ctcctaactgggacaccgttacagaatgatttgaaggaactttggtcgcttcttaatctc
cttcttccggaagtgtttgataatcgaaaagcttttcatgattggttctcaaaacccttt
cagaaggaaggccccactccgaatgctgaagatgattggcttgagaccgagaaaaaaatt
attattatccaccgacttcatcaaattcttgagccatttatgctccgtcgccgtgttgaa
gatgttgaaggatcacttccaccaaaggtttccatagtgttgaggtgtaggatgtcagcc
tttcagagtgctgtatatgactggattaaggccactggcactcttcgtgttgatccggaa
gatgagaaactgagagttcagaaaaatccgaattaccagcctaaagtgtataaaacatta
aataacagatgtatggaactaaggaaaacttgtaaccacccgttgcttaactatccatat
tatggtgacttctccaaggacttcctggtaagatcatgcggaaaactgtggatcctggac
aggatccttataaaactccagaagacagggcatagagtactgctttttagtacaatgaca
aaactacttgatatattagaggagtacttgcaatggcggcgactcatatatagaaggatt
gatggtacaactagtttggaggatcgtgagtctgccatagtggacttcaatagtcctgat
tcagactgctttatattcttgctgagtatacgggctgcaggtcgtggtcttaatcttcag
tctgctgacacagttattatttatgatcctgatcctaaccctaaaaatgaggagcaagct
gttgctagagcacatcgtattggacagacaagagaagtcaaagtcatctacatggaagca
gtggtcgataagatctctagtaatcagaaagaagatgagctaagaagtggtgggtctgga
gatttagaagatgattttgctggtaaggatcgatatatgggatcgattgagagtcttata
agaaataacatacagcagtataagatagatatggcagatgaggtcatcaatgctgggcgt
tttgatcagagaacaacgcatgaagagaggcgtctaactttagagacattgttgcacgat
gaagagcgatatcaagaaactgtccacgatgttccttcacttcaggaggtgaatcgaatg
attgctagaagtgaagatgaggttgaactgtttgatcaaatggatgaagagtttgattgg
acagaagaaatgacacggtatgatcagatacctaagtggcttcgagcaagtacaagagaa
gtaaataatgctattgctaatctatccaaaaaaccttcaaaaaatatattatttggtgct
ggttatggtttggaatccagtgaacttgggtctgattcatccctcagaactgaaagaaaa
agaggcagaccaaagggtaagaagatccctaattacaaggaaatggatgatgataatgga
gagttctcagaagcaagctctgatgagagaaatgggtactctgtccaggaagaagaggga
gaaattgcagagtttgaagatgatgaatatagtagaggcattgaggcaacgcaacttaac
aaggatcagatggaagatggtcctgattgcgatgctaggtatgactaccctcgggatggc
actagaaataatcatttgcttgaagaagctggctcttcaggctcctcttccagcagtcga
aggttgacacagatagtgtctcctgtttcttctcagaaatttggtttcttgtctgcctta
gatgccaggcctagttccctttcaaagagactgcctgatgaactagaggaaggggaaatt
gcaatatctggcgactctcacatggagaaccaacaatctgaaagttggattcatgatcgg
gaagatggtgaagaggaacaggtactgcaacccaagataaaacgtaagaggagtcttagg
cttaggccacgccctccagcagaaaggcgagaagagaagatttataatgaaacccaatct
cttcagtatggagattcttcatctccttctccctttctagcggaccataaattttccaaa
tttaagaatgatcccgaggctaaaccatatggggattccaatacctcgaagcatgaacaa
aacgaatcatcttcgaagactcggcgtaatttgtctgctagaagggtggctccttcatca
aaactgcattcgtctcctaaatctagcagattgaattctttgactggatctgcagatgat
gctgttgaacattctagagaaaattgggacgggaaacaatcaaacgctggtggaaattca
ggttttggttctaagatgcctgacataatccagaggaggtgtaagaatgttatcagcaag
cttcaaagtagaattgacaaagaagggcatcaaattgtgccgttgttaacagatctgtgg
aaacggatggggaattctagtttaccaagtggagtcagtaataacatcttggatctacgg
aagattgatcaacgcatagacagattagagtacaatggagttatggagttggtgtttgat
gttcagtttatgttgaagggtgccatgcagttctatgggttctcatatgaggtaagattc
gaggctaaaaaagtacatgacctcttctttgacattctgaagattgcatttccagacaca
gattttcgagaagctcgaaatgctctgtctttctcaagtcctgggtcttctgctgctgct
acaatgagggaaagacctgctggccaaagcaaaagacaaaagatgatgcatgaaatggac
actgactcaggtccaccgcataagtcccagcatcgtggacctgtgtctggggaagaaacg
agggccaccagaggtcatctaatggcacagaaagaatcgagatttggtagtggaagtgga
agtaaggatcaatatcagatagaagaacccccgcttcttactcatcctggggagctagtt
atctgcaagaagaaaagaaaagacagagaaaaatcaatagtcaagccaaggactggatct
ggtggcccggtctcaccgccacctagcggtgctcgtggtattagaagtccaggtctcagt
tcagttccgaaagacagcaaacaatctcagggatggcccaaccagcctcaatctgccaac
ggcagcggtggtggacctgtcagttgggcaaatcctgtgaagagattaagaacagatgct
ggaaagaggaggcccagccatatctga
DBGET
integrated database retrieval system