Cucumis melo (muskmelon): 103483351
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Entry
103483351 CDS
T03195
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
103483351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmo03400
]
103483351
DNA repair and recombination proteins [BR:
cmo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
103483351
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
103483351
NCBI-ProteinID:
XP_008438156
UniProt:
A0A1S3AWC4
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All DBs
Position
6:1846153..1851351
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AA seq
691 aa
AA seq
DB search
MARNREILVLVLDVGPSMHFILPEVEKVCSMLVEKKLLYNKYDEVGIVLFGTEDTKNELT
EEVGGYQHVVVLQNMKVVDGDLVDVLKQIPRGTVSGDFLDAIIIGMDMLIKKFGETERGK
KRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGIKMDSVVVRGRFGQDANEKTMNEN
DLLLNIFSQKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGDLEISSVIKIKVWVYKKTS
EEKFPTLKRYSDKAPLTDKFATHEVKVDYEYKSAEEPSKVVPPEHRIKGYRYGPQVVPIS
TAEWDAVKFKTEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPGNKRSIVAVSALARAMKE
MDKVAIVRCVWRQGQGGVVVGVLTPNISEKDGIADSLFFNVLPFAEDVREFQFPSFSNLP
AFMQPSEEQQEAADDFVKMLDLAPDGREEILQPDFTPNPVLERFYRHLELKSKDPDAAVP
PLDGTLQKITEPDPDLFSQNKAVINTFHRRFELKENPKLKKSRRHYLREKASGSSDKEDN
EEISAQIVESVANMPMVKVEKVGDSTPLEDFESMMSRRDSPEWISKAINGMKSKIFDLIE
NSSDGDSYTKAIEYLRALRKGCIIEQEPKQFNDFLRHLRNFCPEKNLHTFCEFLASQQIS
LISKEEAADSEVADDEARRFWVKMEPKSEQV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcaacagggaaatcttggtgctggtgttggatgttggtccatcaatgcacttt
attctccccgaggtcgaaaaagtttgttcaatgctagtagagaagaagctactctacaac
aagtacgatgaagtagggattgttctatttggaactgaagacactaaaaatgagctgaca
gaggaagttggtggatatcagcatgtggtggttttacagaacatgaaagtggttgatgga
gatcttgttgatgttctaaaacagatccctcgagggactgtttctggtgattttcttgat
gccataattataggaatggacatgctgataaagaaatttggagagacagaaagggggaag
aaacgcctatgtctcgtgacagatgctctattccctataaaagaaccttatgaaggaact
aaagaggatcaagttacgaccattgcgcagcagatgacaaaacatggcataaaaatggat
agtgttgttgtgagagggaggttcggtcaggatgcaaatgagaaaacaatgaatgaaaat
gaccttcttttaaacatattttcacagaaaacaaatgcaaaaatggtgtatgtggagagt
ccaacttcattattaggtgcaatccggactcgcagtatagcacctgtgacaattttcaga
ggcgaccttgagataagctccgttatcaagattaaggtatgggtttataagaaaacatca
gaagagaagtttcctactctgaaaagatattctgataaagcacctctaactgataaattt
gccacgcatgaagtcaaggtagattatgagtacaaaagtgccgaagaacctagtaaggta
gtgcctccagaacataggatcaaagggtataggtatggacctcaagtggttcctatatcg
accgctgaatgggatgcagtgaagttcaaaacagaaaagagcgtgaagctgctcggattt
acgaatgcctcaaatataatgaggcactactacatgaaagatgtcaatgtcttcattgcc
gaaccaggcaataaaagatccattgttgcagtttctgctctagcaagagcaatgaaggaa
atggacaaagtggcgatagtgcgatgtgtttggagacaaggacaggggggtgttgttgtg
ggtgtcttgacacccaatatatccgagaaggacggtattgccgattcgttattcttcaat
gtacttccctttgcggaggatgttcgggaattccagtttccatccttcagcaatttgcca
gcattcatgcagccaagtgaagaacagcaagaggcagcagatgactttgttaagatgctt
gatcttgcaccagatgggcgagaggaaattctacagccggatttcacaccaaatcctgtt
ctggagcgtttctaccgtcatctcgagttgaaatcaaaggatcctgatgctgctgtacct
ccacttgatggaactctccagaaaattaccgagccagatccggacttgttttctcaaaac
aaagctgttatcaacaccttccacagaagatttgaactcaaggagaacccaaagctaaag
aaatcgagaaggcattatttacgtgaaaaagcatcaggttcaagcgataaagaggacaac
gaagagatttctgctcaaattgttgagtctgttgccaatatgcctatggttaaagtcgaa
aaggttggagattcaactccacttgaagattttgaatctatgatgtctagaagagatagt
ccagaatggatcagtaaagcaatcaatggcatgaaaagcaaaatattcgatcttatcgag
aactcctctgatggtgatagctacacaaaagctatcgagtacttgcgtgcacttcgcaag
ggttgcattattgaacaagaaccaaagcaattcaacgattttctccgccatctccgtaac
ttttgccccgaaaaaaacctccataccttctgtgaattcctcgcatctcaacaaattagt
ttgatctccaaggaagaagctgctgacagtgaagtagctgatgatgaagctagaagattt
tgggttaaaatggagcctaaatcagagcaagtctag
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