KEGG   Cucumis melo (muskmelon): 103483932
Entry
103483932         CDS       T03195                                 
Name
(RefSeq) chromatin structure-remodeling complex protein BSH isoform X1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03082  ATP-dependent chromatin remodeling
cmo03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103483932
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    103483932
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cmo01009]
    103483932
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmo03021]
    103483932
   03036 Chromosome and associated proteins [BR:cmo03036]
    103483932
Protein phosphatases and associated proteins [BR:cmo01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103483932
Transcription machinery [BR:cmo03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     103483932
    SWI/SNF complex
     103483932
Chromosome and associated proteins [BR:cmo03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    103483932
   PBAF complex
    103483932
   SWI/SNF complex
    103483932
SSDB
Motif
Pfam: SNF5 GP70
Other DBs
NCBI-GeneID: 103483932
NCBI-ProteinID: XP_008439008
UniProt: A0A1S3AXP6
LinkDB
Position
6:5972006..5978298
AA seq 240 aa
MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV
KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTIIKDQFLWDL
NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG
FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERIAR
NT seq 723 nt   +upstreamnt  +downstreamnt
atgaaagcttcggcctcgccccattcaaaagctccatttaagttcaggattccgacggcg
gagaatcttgtcccgatccgtttggacattgaaatcgacggtcagaggttcaaagatgct
ttcacttggaacccttctgatcccgattcagaggtggtggtttttgcaaagaggacggtg
aaagatttaaaacttcctccggcatttataacacaaattgcacaatccattcaatcacaa
cttacagaatttcgatcctttgaaggtcaagatatgtatactggtgaaaagatcattcca
atcaagcttgatcttcgagtgaacaatacaatcataaaggatcagtttctgtgggacttg
aataactatgagagcgaccctgaagagttctccaggacattatgcaaagatttgggtatt
gatgaccctgaagttggacctgcaattgctgttgccattagagaacagctctatgagata
gcagtgcaaaatgttgcttcagcaagagaaagcagaatgagcaagaagggccgccgaggg
tttgagcatgttccagtaagtaaaactggaggtgcttcggtggacttggtgaagttattt
ggtcatagatcaagtgttgttcggaaaagaaaggactgggacatttacgaaccaattgtt
gatcttctatccaacgaggaagtagatgcccttgaagcaaaagaagagaggattgctcga
tga

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