Cucumis melo (muskmelon): 103483937
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Entry
103483937 CDS
T03195
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 50
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmo03041
]
103483937
03009 Ribosome biogenesis [BR:
cmo03009
]
103483937
Enzymes [BR:
cmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103483937
Spliceosome [BR:
cmo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103483937
Ribosome biogenesis [BR:
cmo03009
]
Eukaryotic type
90S particles
Helicases
103483937
Pre-60S particles
103483937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Cas3-like_C_2
Helicase_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
103483937
NCBI-ProteinID:
XP_008439020
UniProt:
A0A1S3AXT4
A0A9I9CPU4
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All DBs
Position
6:complement(6027401..6036046)
Genome browser
AA seq
648 aa
AA seq
DB search
MARAPIHTPANFLTSRTLESCYLGRQCLCSPFLSQSLRSVSTNKLVSVGGCVVVGYARKS
VDSAGVYQLTDEDDFTVTSSEELRYDGDETVDDEDTKTSGMRKRISIGSFGRLKTQKVKA
IVTKGSRTNEELRNDVRKPTPEDGSPHITDYPRSKVKTMGEKKRINASRNVEKNSRPSEQ
QDRERHQITAPNLSRSEPLVSSGSGSYFRGWGSRGPYGSEYEPTERKQQKISSEKGFYSR
KSFKDLGCSEYMIESLRRQNFIRPSQIQAKAFASVIEGKSCIISDQSGSGKTLAYLVPLI
QRLRQEELEGVRKSSSKSPQIVIIVPTAELASQVLSNCRSISKFGVPFRSMVVTGGFRQK
TQLDNLQEGVDVLIATPGRLMLLINEGFLLLSNLKCAVMDEVDILFNDEDFEVALRSLMK
SAPVNTQYLFVTATLPVDIYNTLVENFPDCEVIMGPGVHRISPSLEEVLVDCSGEEEQNK
TPDAAFLNKKDALLQIAEGTPVSKTIVFCNKIETCRKVENALQRFDKKGSRLQVFPFHAA
LARESRLANMEAFTNSHSNQVSKFLVCTDRASRGIDFPNVDHVILFDFPRDPSEYVRRVG
RTARGATGKGKAFIFVVGKQVPLARRIIERNRKGHPLHDVPSAYELTY
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggccagagctcccatccatactccggccaactttctgacctctcgtaccctcgaatcg
tgctacttaggacgccaatgcctctgctcgccgtttctgagccagtctctacgctcagtt
tccacaaacaaattggtgagcgttggtggttgtgtagttgttggttatgctcgtaaatcg
gtggattctgctggagtttaccagcttactgacgaggatgactttactgttacttcctcg
gaggaattgcgttacgatggagatgagacagttgatgatgaagatactaagacttcagga
atgcgtaaaaggatttctattggaagctttggaagattgaaaactcagaaagttaaggca
attgtgacgaaaggttctaggacaaacgaagaattaagaaatgatgtccgtaaaccaact
cctgaagatgggtcacctcatataactgattatccacgctctaaagttaaaactatggga
gaaaagaagaggataaatgcctcgagaaatgtagaaaaaaattcaagaccatctgaacaa
caagatagagaaagacatcaaataactgcccccaatttatcaagatccgagccattagtt
tcatcaggttctggttcttacttccgaggatgggggtctagggggccctatggttctgaa
tacgaaccaactgagcgtaaacaacagaaaatttcctcagagaagggtttttatagccga
aagtcatttaaagaccttgggtgctctgaatatatgattgaatcattgaggaggcaaaat
ttcattaggccgtcacagattcaggccaaggcatttgcatcagtcattgaaggaaagagt
tgtataatttctgatcaaagtggatctggcaagacattagcatatcttgtaccattaatc
cagcgtctgagacaggaagaacttgaaggagttcgaaaatcttcttcaaaaagtccccaa
attgttatcattgtgccgactgcagaattggcttctcaggtcttaagtaattgccgatcc
atttcaaaatttggtgtgccatttaggtctatggtcgtgacaggcggttttcggcagaaa
actcaacttgataatctacaagaaggtgttgatgttctaatagcaactcctggtcgtttg
atgcttctaataaatgaaggcttcttgctgttatcaaatctaaaatgtgctgtaatggac
gaggtagatatccttttcaatgatgaggattttgaagttgcattgcggtctttaatgaaa
tctgctcctgttaacactcaatatctatttgtgactgcaacattaccggttgacatatat
aatacattagtagaaaactttcctgattgtgaagtgatcatgggacctggagttcaccga
ataagtcctagccttgaggaggttcttgtagattgtagtggtgaagaggagcagaacaag
acgccggatgctgctttcttgaataagaaagatgccctcttgcagattgcagaaggaact
ccagtctcgaaaactattgttttctgtaacaagattgagacatgtagaaaagttgaaaat
gcattgcagcgttttgataaaaaaggtagccgcttgcaagtttttccatttcatgctgcc
ctagcaagagagtcacggctagcaaatatggaggcatttaccaattctcattctaaccaa
gtatccaagttcttggtttgcactgatagggcatcacgtggaattgattttccaaatgtg
gatcacgtcatactctttgacttccctcgtgatcctagcgagtatgttcgccgtgttggg
agaactgccagaggtgctacaggaaaaggaaaagcattcatctttgtggtcggaaagcag
gtgccccttgcacggaggataattgaaagaaacaggaaaggccacccattgcatgatgtg
ccatctgcttatgagcttacgtactaa
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