Cucumis melo (muskmelon): 103484329
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Entry
103484329 CDS
T03195
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103484329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103484329
04121 Ubiquitin system [BR:
cmo04121
]
103484329
03036 Chromosome and associated proteins [BR:
cmo03036
]
103484329
03400 DNA repair and recombination proteins [BR:
cmo03400
]
103484329
Messenger RNA biogenesis [BR:
cmo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
103484329
Ubiquitin system [BR:
cmo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
103484329
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
103484329
DNA repair and recombination proteins [BR:
cmo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
103484329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-C3HC4_2
zf-RING_6
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-HC5HC2H_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
PHD_NSD
RTT107_BRCT_5
zf-RING_10
zf-UDP
zf-rbx1
Microp_apicomplexa_5
Motif
Other DBs
NCBI-GeneID:
103484329
NCBI-ProteinID:
XP_008439576
UniProt:
A0A1S3AZ31
LinkDB
All DBs
Position
8:complement(764570..771014)
Genome browser
AA seq
1105 aa
AA seq
DB search
MGDPSHLEKMGRELKCPICLSLLNSAVSLGCNHVFCNVCIEISMKSGSNCPVCKVPYRRR
EVRPAPHMDNLVSIYKSMEAASGINIFVTQNLSSTKLSDGDKQVEGDGNGSKQLNAETSE
STAYVQRTSKKESQKIQKSKRKTSASSPLKPSFPRKKRVQVPQHPLSETPTRPAKLASSC
NEVNEPKERTVASEDQGQPVLSPFFWLRERDEEDEKLNQQSDLDQSTESLAMNVPAFSDI
KDSLDESPSKPQMDEVCGKPSYDLDLFDSEMFEWTQRACSPELCSSPFKLQVVDVAGTET
ALLASVPNEEPGNQNPNGIYNKSRGIQDGLVPDVPPPEGNSMKDHTMRAKLTKRGGKKND
VALMKCSKKLAESATGNYSHPATETECSSKKQEHDVIIRFGSLKNGSKRSKKKIHYGTES
TDAIKATLESVPAAPINLATPNENFTTKTPAFQEEEKENQFLEKRLKNDRASKTMHFGID
ASRATPKNVLTDRVSIGVPDGGRENFETETLVLPEGEKACQLPKNNCTKGRGRKKAHFCN
NANKRILEDISAHPISLGTPNNGPENFVIELSAFQEVEKVSQFPEKNSQNGGDRRDQRVV
QCRRKSKKQKLDSVDNNLRENPSINQNQHDDCAIPGLTTTLSAIATSTDLKREHKKQEKV
SSVCVKTSEYGNITQEKYDGAQANRSQLSEKLWSTNGKNLDSMTKNDCSEKHERLDDEFH
CAFCRSSEESEGSGRMVHYFNGKPIDADDIKNSKVIHAHWNCVEWAPNVYFDGDTAINLE
AELSRSRRITCGCCGNKGAALGCYEKNCRKSFHVPCAKLMPQCQWDTENFVMLCPLHPDS
KLPSQDPGYQERKSSCASNRRSNTKGIAVAREISKNGRFTFRESSKKLVLCCSALTIAER
EAVDEFQKLSGVPVLQKWDDSVTHIIASTDENGACKRTLKILMGILKGKWILGIEWIKAC
IQAMEQIKEERFEITLDVHGSRDGPQLGRLRVLNNQPKLFAGFKFFFTADFAPSYKGYLQ
QLVTAAGGNILHRKPVSSNNQNNCQVFIIYSLELPDQSNPAEKNNILHRRRSDAALLAKS
AAAKVATNLWLLNSIASSKLTSLEE
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgggagatcccagtcacctggagaagatgggaagagagctcaaatgcccgatttgtttg
agtcttctaaactctgccgtttcactgggatgcaaccacgtgttctgcaatgtatgtata
gagatatcaatgaaatcgggttcgaactgcccagtttgtaaggtgccttatcggcgaaga
gaagttcgtcctgctccacacatggataatttggtgagcatttacaaaagcatggaagct
gcttcgggaattaacatatttgttactcagaatttgtcttctactaagttatctgatgga
gacaaacaagttgaaggtgatggcaatggttcaaaacagcttaatgcagaaaccagcgag
agcacagcttatgtacaaagaacttcgaaaaaagagtcacaaaaaatacaaaaatccaag
cgaaagacttctgcttcttcccctctgaaaccttcatttccaagaaagaagagggttcag
gtgccacaacatcccctctcagaaacacctactcgacctgcaaagttagcaagtagttgt
aatgaggtgaatgaaccgaaagaaaggactgttgcttccgaggatcaaggtcagccagtt
ctttcaccatttttttggttgagagaaagagatgaagaagatgaaaagttgaatcagcag
tcggatttggatcaatctacagaatcattagcaatgaatgttcctgccttcagcgatatc
aaggattcactggatgaaagcccttcaaagcctcaaatggatgaagtgtgtggcaagcca
tcctatgacttggatctctttgacagtgaaatgtttgaatggacgcaaagagcctgttcc
cccgaactctgttcaagtccctttaaactgcaggttgtagatgttgctggaactgaaaca
gctttgttagcatcagtacccaatgaagaaccagggaaccaaaatccaaatggaatttac
aataaaagtcgtggtatccaggatgggttggtacctgatgtgccccctccggaaggcaac
agtatgaaggatcatactatgcgtgctaaacttaccaaaagaggtggaaagaaaaatgac
gttgcactgatgaaatgttctaaaaaattggctgaatcagctactgggaattattcccat
ccagctaccgaaactgaatgctcgagtaaaaagcaggagcacgatgttataatcagattt
ggaagtttgaaaaatggaagcaaaagaagcaagaagaaaattcactacggtactgaatct
actgatgcaattaaggcgacacttgaaagtgttcctgctgctccaattaatttagcaact
ccaaatgagaattttacaaccaagacacctgcgtttcaagaggaggaaaaggaaaatcaa
ttcctggaaaagaggctcaagaatgacagagccagcaagacaatgcactttggtattgat
gctagtagggcgactcctaaaaatgttcttacggatagagttagtataggagttccagat
ggaggacgtgagaattttgaaacggagacgttagttttaccagaaggtgaaaaggcttgt
caacttcctaagaataattgcacgaaaggaagaggcaggaagaaagcgcatttttgtaac
aatgctaataagaggattcttgaagatatttctgcccatcccattagtttaggaactcca
aacaatggtcctgaaaattttgtaatagagttatcagcttttcaagaagtggaaaaggtt
agtcaattccctgaaaaaaacagccagaatggcggagaccgcagagaccagagagtggtt
caatgccgtaggaagtcaaagaaacaaaagctggattcagtggacaacaacctgcgtgag
aacccatcaatcaatcagaatcagcatgatgattgtgccattcctggtctgaccaccaca
ctttctgcgattgctacgtcaactgatctaaagagggaacacaagaaacaagagaaagtt
tcctctgtttgtgtaaaaactagcgagtacggtaacatcactcaagagaagtatgatggt
gctcaggcaaatcgaagtcagctctctgaaaagctttggagtaccaatgggaaaaacttg
gattctatgaccaaaaatgattgttcagaaaaacatgaaagattggatgatgaatttcat
tgtgctttctgtcgctcatcagaagagtcagagggttctggaagaatggtccactatttc
aatgggaagcctatcgatgcagatgacataaaaaactcgaaggtcatacatgcacattgg
aattgtgttgaatgggcccccaatgtttattttgatggcgacactgcaattaaccttgaa
gctgagctaagtagaagccgaagaattacgtgtggttgctgtggaaataagggtgctgca
cttggttgttatgagaagaattgtcgcaagagcttccacgttccttgtgcaaaattgatg
cctcaatgtcaatgggacaccgaaaattttgtgatgttatgcccgcttcatccggattct
aaactgccaagccaagatccagggtaccaagaacggaaaagcagctgtgcttctaaccga
cgatcgaacactaaaggtatagcggttgcccgtgagatcagcaaaaatggaaggttcaca
tttcgtgaatcatctaagaaattggttctatgctgttcagctctcaccatagctgaaagg
gaagctgtagatgaatttcagaaattatctggagttccggtgttacaaaaatgggacgat
agcgttacacatattattgcatcaacagatgaaaatggagcatgtaaaagaacgctcaaa
attttgatgggtattttgaagggaaaatggattttgggaattgaatggattaaggcttgt
atacaagccatggaacaaataaaggaagaacgctttgagatcactcttgatgtccatgga
agcagagatggccctcagcttggaagattgagagtcctgaacaatcaaccgaaactcttt
gctggattcaagttcttctttacggctgattttgcaccttcatacaaaggatatctccaa
caacttgtcactgcagcaggaggaaatattctgcatagaaaaccagtttcaagcaacaac
caaaacaactgccaagttttcatcatttacagtctcgagcttcctgatcaatccaatcca
gctgaaaagaataacattctccatcgcaggcgttccgatgctgcgttgcttgctaagtcg
gctgcagccaaagttgccaccaatttgtggcttttaaactcgattgctagcagtaaatta
acaagccttgaggagtag
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