Cucumis melo (muskmelon): 103484616
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Entry
103484616 CDS
T03195
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X2
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
103484616
Enzymes [BR:
cmo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
103484616
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Endotoxin_C
Dioxygenase_C
Motif
Other DBs
NCBI-GeneID:
103484616
NCBI-ProteinID:
XP_008440005
UniProt:
A0A1S3B0U4
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Position
8:complement(2556923..2561311)
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AA seq
596 aa
AA seq
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MDNILDVKSSESKRGYWDINWSWPGGKDRYQLLKGSEFNVINSSDDTIEISFRKDFDLST
RGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPSECRAFDLAQTRMVFKLRQEKFHYMAISD
EKQRIMPMPEDLRPGRGEQLIVPESVLLVNPINPDLKGEVDDKYQYSEDNKDGGVHGWIS
SSPNNIGFWIVFPSYEFRNGGPTKQNLTVHTGPTCLAMFHGTHYIGEDILTHIKEGEAWR
KVFGPILIYLNSTSDVSEAHNLWIDAKEQRMQEETAWPYNFVSSSFYLMARERGSISGRL
LVRDRFISSSPIPARDAHVGLSAAREEGAWQTESKEYQFWVKTDSNGDFTIRNIIPGVYG
LHGWVPGFIGDYLHKSLVTVSAGSYTHLGILTYSPLRDGPTVWEIGFPDRTANSFYVPDV
NPMYVNKLFLHSPEKFRQYGLWDGYSDSHPRNDQIFTVGINDPKKDWFFAQVCRRGEDGK
YVATTWTIKFNMKSLTDGIYRLRLSIASATRSDLKINVNSMESESSLVFQLMDLGMDNTV
CRHGNHGLYRIYTIDVPSSMLVKGDNSIFLTQARNGDALCGILYDYLRLEAPDATP
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggacaatatattagacgtaaaatcaagcgaatctaaaagaggatattgggatatcaac
tggagttggcctggaggcaaggacagataccaattgcttaaaggatctgaattcaatgtc
atcaactcaagtgatgacacgattgagatatcattcaggaaagattttgacctgtcaact
cgaggcaacaaacttccacttggtgtggacataaggtacataatgaggactggtattcca
ggcttctattgctatgcaatctacgagcacccatcagaatgtcgagctttcgatcttgct
cagacaagaatggtgtttaagctgcgacaagagaagttccactacatggcaatttcagat
gagaagcaaagaataatgccaatgccagaggatttgcgtccaggcagaggtgaacaacta
attgtacctgagtcagtcctgcttgtaaatcccattaaccctgatctgaaaggagaggta
gatgataagtaccaatactcggaggataacaaagatggaggagttcatggatggataagt
tccagcccaaacaacataggtttttggatagtttttccaagctatgagttccgaaatgga
ggtcctacaaagcaaaatctgacagtccatactggtcctacatgtcttgctatgtttcat
ggaacccattacattggagaagatatactcacacatatcaaggagggagaggcatggaga
aaggtctttggtcctattcttatataccttaactccacctcagatgtatcagaggcacac
aatctatggatagatgcaaaggaacagagaatgcaagaggaaacggcatggccatacaat
tttgtctcttcatctttttatttaatggctagagaacgtggttcgatttcaggaagacta
ttagtccgagacaggtttatttcaagttctcccatccctgcaagagatgcacatgttggt
ctatctgctgctagagaagaaggtgcctggcaaacggaaagcaaggaatatcaattttgg
gtaaagacagattccaatggagatttcactattagaaacattattcctggagtctatgga
cttcatggttgggtacctggattcattggtgactatcttcacaaatcactagtaacagta
tcagcaggatcttatacccatcttggcattctgacctatagtcctctcagagatggtcct
actgtatgggagattggttttcctgaccgtactgctaatagcttctatgttcctgatgtg
aatccgatgtatgtcaacaagttattccttcatagcccagaaaagttcaggcaatatggt
ttatgggatggatacagcgattcacatccaagaaatgaccaaattttcactgtgggtatc
aatgatccgaaaaaagattggttctttgctcaagtttgcagaagaggggaagatggcaag
tatgttgcgacaacatggactattaagttcaacatgaaatccttaactgatggaatctac
cggctgaggttgtccattgcatctgcaacacgctcggacttgaagattaatgtcaactcg
atggagtcggagtcatctctggtcttccagctgatggatctaggaatggataacacagtt
tgtcgacatggaaatcatggactgtatcgaatttataccatcgacgttccatcttcaatg
ctagttaagggagataatagcatatttctcacgcaggcaaggaatggagatgcactctgt
ggaattttatacgattatttaagattggaagctcctgatgctactccatga
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