KEGG   Cucumis melo (muskmelon): 103485121
Entry
103485121         CDS       T03195                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1 isoform X1
  KO
K14962  COMPASS component SWD2
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    103485121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmo03019]
    103485121
   03036 Chromosome and associated proteins [BR:cmo03036]
    103485121
Messenger RNA biogenesis [BR:cmo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     103485121
Chromosome and associated proteins [BR:cmo03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     103485121
    COMPASS/SET1 complex (yeast)
     103485121
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_SPT8 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_VPS8 KNTC1_N Beta-prop_WDR35_TULP_N Cytochrom_D1 VPS11_N
Other DBs
NCBI-GeneID: 103485121
NCBI-ProteinID: XP_008440813
UniProt: A0A1S3B2M1
LinkDB
Position
8:complement(6054997..6058794)
AA seq 332 aa
MGGAQSEREEKVSLELTEEILQSMEVGMTFRDYNGRISSMDFHRTSSYLVTASDDESIRL
YDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFRGH
HDRVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAF
GGYIRMFDARKYEKGPFDIFSVGEDVSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTL
LSTYNVKPISRNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIK
WAPGSLMFATGSSELSFWIPDLSKLGAYVDRK
NT seq 999 nt   +upstreamnt  +downstreamnt
atgggaggggctcaatccgaaagggaggagaaagtgtctttggagctaaccgaagaaatc
cttcaaagcatggaagtcggcatgacattcagagactataatggtagaatcagttcaatg
gattttcacaggacttcaagctatctggtgactgcgagtgatgatgaatccatccgactt
tatgatgttgccagtgcaacatgtttgaaaacaataaacagcaaaaagtacggggttgat
ctggtttgctttacttctcatcctacaacagtgatatattcttcaaaaaatgggtgggat
gagtctctgcggcttctctccttgaacgacaataagtacctgcggtactttagaggtcat
cacgacagagttgtatcactcagcttatgcgctcgcaaagaatgctttatatctgggtct
cttgatcgaactgttttgctttgggatcaaagggcagagaaatgccagggtcttttacgt
gtacaaggaaagccagctacagcatatgatgagcaaggtgtggtttttgccattgccttt
ggaggttacataaggatgtttgatgctcgcaaatatgagaagggtcctttcgatatattt
tctgttggggaagatgtatctgatgcaaatattgtaaagttcagtaatgatgggagactc
atgttgttgacgacttcagatgggcatattcatgttctcgattctttcagaggaacacta
ttatctacgtacaatgtaaaacccatttcaaggaatttgacgttggaggcatcttttagt
ccggagggaatgtttgtgatatcaggttcgggagatggcagtgtttatgcttggagtgta
aggagtggaaaagaggttgcaagctggatgagcactgaaatggagcctcctgtcataaag
tgggctccaggaagtctaatgtttgcaacgggatcttctgaactgtcgttttggatacct
gatttgtctaaattgggagcttatgtagacagaaaatag

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